Pogonomyrmex barbatus (red harvester ant): 105424035
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Entry
105424035 CDS
T04903
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105424035
09123 Folding, sorting and degradation
03018 RNA degradation
105424035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105424035
03041 Spliceosome [BR:
pbar03041
]
105424035
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105424035
mRNA degradation factors
5'-3' decay
Lsm complex
105424035
Spliceosome [BR:
pbar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105424035
Complex C
U2 snRNP components
105424035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105424035
NCBI-ProteinID:
XP_011632370
UniProt:
A0A6I9W1W4
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctattcctttttcaagtctttaatcggaaaggacgtggtagttgaattgaag
aatgatctcagtatctgtggtacattatattctgtagatcagtatctaaacattaaattg
gctgatattagtgtaacagattcagaaaaatatccacacatgttatcggtaaaaaattgc
tttattcgtggatctgtggtaagatatgtacaacttccagtggatgaagtagacattcat
ctattaactgaagcagcacgtagagaagcaatgaatgctcaagcaagataa
DBGET
integrated database retrieval system
