Pogonomyrmex barbatus (red harvester ant): 105424095
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Entry
105424095 CDS
T04903
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105424095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105424095
03036 Chromosome and associated proteins [BR:
pbar03036
]
105424095
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105424095
Coactivators
SAGA/TFTC/STAGA complex
105424095
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105424095
STAGA complex
105424095
TFTC complex
105424095
SAGA complex
105424095
SLIK complex
105424095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR3_2nd
Beta-prop_THOC3
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_RIG_1st
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
105424095
NCBI-ProteinID:
XP_011632442
UniProt:
A0A6I9W221
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MIGMHQASVSVTAHCCRCALNFWWKCVYLRLFFSVIIYQQQFANMDNDKSTMLAVLQLLK
KYNLKGTEELFRKEANLTDVSLDDAQQTDSDVTSVLSAYKSEGDPAQYEKAYSELKKFVE
GALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFGTNLEEYYQEDLKRISNVT
KREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLLNIIQEHLYFDMYEGVA
RNKQQIDATSGAMVGEATRQDNKAKVYYGLLKEPDIQCVAPAEEEEDDTGGGDGDKPKKK
KAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKVEKIKSLREASKRVVLGPDTLPSICF
YTLLNTTYTVTAAEVAEDSSLLATGFSDSGIKIWSLVPQKLRLMKSGEQLQEINREAEDV
LVRMMDERTSETAKNLYGHNGPVYSLSFSQDRNLLLSSSEDTTIRLWSLHTWTCVVCYKG
HLFPVWCVKFSLHGYYFASASNDKTARLWTTDSHQPLRIFAGHYSDVDVIQFHPNSNYVA
SGSSDMTVRLWDCVTGNQVRLMTGHKGPIFSLAFSAEGRFLASAGADHRVLVWDLAHGHL
VAALSGHTANIHCLSFSRDGNILVSGSLDYTLKLWDFTKLAEEMSLEDVNVSHNPDVKTN
SESYLLRTFATKSTSILTLHFSRRNLLLGVGMFDSA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgattggcatgcatcaggcgtcagtcagcgtcactgcccactgttgtcggtgtgcttta
aatttttggtggaagtgtgtatatttaagattatttttctcggttattatatatcaacaa
caattcgcaaatatggataatgacaagagcactatgctagctgttcttcaacttttgaag
aaatacaatttaaagggaactgaggagttatttagaaaagaagctaatctcacggatgtt
tcacttgatgatgctcagcaaactgattctgatgtgaccagtgtcctttccgcttataaa
agcgagggagatcctgcacaatatgaaaaagcatatagtgaattgaaaaaatttgttgaa
ggagctttggacatttataagcatgaattgggaactatattgtatccagttttggtgcat
atgtatctggaattggtttacaacaatcattctaaagaagcaaaacagttgatggaaaag
tttggtacgaatttagaagaatattatcaagaagatttgaaaagaatatccaatgtaacg
aaacgggaacaaatggcggggaatgagttaaccgatacatttaaatccaatcaatttata
atcagaatgtcaagggatactctttcaatactaaaacggcatttacaagaaaagaaacac
agtgtattgctaaatattatacaagagcatctttactttgatatgtatgaaggtgttgct
cgtaataaacaacagatagacgcaacatctggagctatggtaggagaagctaccagacaa
gataacaaagccaaagtctattatggacttctaaaagaaccagatattcagtgtgtagca
ccagccgaggaagaagaggacgatacaggtggtggagatggagacaaaccaaagaagaaa
aaggctaaaaaggatccattattttcaaagaaaactaaatccgaccctaatgcaccacct
gtcggaagaatgccattacccaatttgaaagatgcagataaagtagaaaaaattaagtca
ttgagggaagcatcaaaaagagttgtccttggacctgatacattaccatctatatgtttt
tacacattattaaacactacttatactgtaacggcagcagaagtggcagaagactcgagt
ttattagctactggatttagtgattccggtataaagatatggagcttggttccacaaaaa
ctgaggttaatgaaaagtggtgaacaattacaagaaattaatagagaagcagaggatgta
ttagttagaatgatggatgaacgaacatctgaaactgcaaaaaatctctatggtcataat
gggccagtttatagcctttcatttagtcaagatagaaatcttctactttcatcatcagaa
gatactacaataagactatggtcactacatacatggacatgtgtcgtctgctacaaaggt
cacttatttcccgtgtggtgcgtaaaattctcactgcatggttattacttcgcaagtgcc
tcaaatgacaaaactgccagattatggacaactgattctcatcagccgttacgaatattt
gctggtcattattcggacgttgatgtaattcaattccatccaaattcaaattatgttgca
agcggttcaagcgacatgactgtgagattgtgggactgtgtaactggcaatcaagtccgc
ttaatgactggacacaaaggaccaatcttttctttagctttctcagcagagggaagattt
ttagcttcagctggcgcagatcatcgtgtactcgtatgggatttggcacacggtcacctt
gtcgcagcgttatcgggtcatacggctaatattcactgtctatcgtttagtcgagatggc
aatatcttagtttcgggatctttagattatactctgaaattgtgggactttacaaaatta
gcggaagaaatgagcttggaggatgttaatgtttcacacaatccagatgtgaaaactaat
tcggaatcgtacctactgcgtactttcgcaacaaaaagcacatctattctgacattgcat
ttttcgcgtagaaatttattgctaggcgtcggcatgtttgactcagcataa
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