Pogonomyrmex barbatus (red harvester ant): 105424100
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Entry
105424100 CDS
T04903
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03008
Ribosome biogenesis in eukaryotes
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105424100
03015 mRNA surveillance pathway
105424100
03008 Ribosome biogenesis in eukaryotes
105424100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105424100
03009 Ribosome biogenesis [BR:
pbar03009
]
105424100
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105424100
mRNA cycle factors
Stress granule specific factors
105424100
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105424100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
105424100
NCBI-ProteinID:
XP_011632449
UniProt:
A0A6I9WL12
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MMPWKLNKSKIWDDHNIRGNENKSYFRHDNIRRNNNGSNIGPIKHCISFKNERFNNREKW
HKLPLINFKNSFLIGSNKDSRQVIIVPRDRDQENRAWQIMSQKTNNFMPNRNLKRSQSDS
ISHSLPVVNSNYYRIIIPYGSKYKKDDVIRSLLNFMAQIFVPIMYKVIGMEASFYVDDFK
MANALVNCDRKIIMTDGFKLQVKLGQRKEFPVCEINDKLKERLKQAMEKRYIRETNALDL
SKFHLDPDLVSDYFCALFHPDILMTVLNIVAEYIPNLEILNLEDNKLQNIERLSILSDKF
LKLKIFYIGKNKIRDIQQLDSIKNLELSELKLTGNPVCYKYKSRQSDYVSDVRKRFPKLM
HLDGMELPRPIVFDVDETKIPSSQRIFVTDVTAREIAGGFLQQYFTVFDSENRQALLNAY
DKDACFSMTITDSYKLNGYFMENRNLLKINDTNKRHKLLKQGRLPVVSLLSEMSRTRHLL
NTFTMDISLVTQAMMFITLTGYFQELNKRDEPIRHFNRTFMIVPEGDGYCIRNEQLHISQ
PPEAQLKQLRQQLNQQLNNQQTQQTPAVEVGEVARVATMEPSEEIKQQMTVTLSQQTTMN
LEWSLKCLREMEWNYGNALSAFQEFYKCGQIPLEAFTK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtggaagttaaataaatcaaaaatatgggatgatcacaacatccgaggaaat
gagaacaagagttatttccgtcatgataacattagaagaaataataatggatctaatatt
ggtcccattaagcattgcatatcatttaagaatgaaagatttaacaatagggaaaagtgg
cataaattaccactgataaattttaagaatagttttctgattggctcaaacaaagattca
agacaagtgataattgttccaagagatagggatcaagaaaacagagcttggcaaatcatg
tctcagaagacaaataattttatgccaaacagaaatttaaaaagaagtcaatcagattct
atatcgcattctcttcctgtggtaaactccaattattatagaattattataccatatggt
tctaaatacaagaaagatgatgtaataagatccctattgaattttatggctcaaatcttt
gttcctataatgtataaggtgataggaatggaagctagtttctatgtagatgattttaag
atggcaaatgcattggtaaactgtgatcgcaagattataatgactgatgggtttaaattg
caagtaaaactagggcaacgtaaagaatttccggtatgtgagattaatgacaagttgaag
gaacgattaaagcaagcaatggaaaagagatacatccgagagacaaatgctttagattta
tccaaatttcatctagatccagatcttgtctctgattatttttgtgcattgtttcatcct
gatatattgatgactgtgttaaatattgtggccgaatatataccgaatttggaaatctta
aacttagaagacaacaaattacagaatatcgaaagacttagtatattaagtgataaattc
ttaaaattgaaaattttttacattggtaaaaacaaaatcagagacatccagcagcttgat
tccattaagaatctggaactcagtgaattgaagttaactgggaatcccgtgtgctacaaa
tataagtctcggcaaagtgattatgttagtgatgtccggaagcgattcccaaaactaatg
catttagatggcatggaattgccacgaccgatcgtcttcgatgtagatgaaactaaaatt
ccctcatcacagagaatatttgttaccgatgtcacagcgcgagagattgcgggtggtttt
ttgcaacagtatttcacggtattcgatagtgagaatcgccaagccttacttaatgcatat
gacaaagatgcttgctttagtatgactataaccgattcttacaaattaaatggatatttt
atggaaaatcggaatttattgaaaataaatgacacgaacaaaagacacaagttattgaaa
cagggtagattacccgtagtttctctattatcagaaatgtcacgaacaaggcatttgcta
aatacttttactatggacatctctcttgttacacaagcaatgatgttcatcacactaacg
ggttatttccaagagcttaacaagagggatgaaccgattcgccatttcaatcggacattc
atgatcgttccggaaggtgatggatactgtattcggaatgagcagttgcatatcagtcaa
ccgcctgaggcgcaactgaagcaactacgtcagcaattgaatcagcaattaaataatcag
caaactcagcagacacctgcggtagaagtcggagaagtcgcaagagtcgcgacaatggaa
cccagcgaggagataaaacagcagatgacagtaacgttaagtcaacaaacgactatgaat
ctggaatggagcttgaaatgtttacgagaaatggagtggaactacgggaacgcactctcc
gcttttcaagaattttataaatgtggacagataccactagaagcgttcacgaagtag
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