Pogonomyrmex barbatus (red harvester ant): 105424106
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Entry
105424106 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105424106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105424106
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105424106
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
HECT type E3
105424106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Ank_2
Motif
Other DBs
NCBI-GeneID:
105424106
NCBI-ProteinID:
XP_011632462
UniProt:
A0A6I9VTV2
LinkDB
All DBs
Position
Unknown
AA seq
2837 aa
AA seq
DB search
MTSIHFVVHPLPGTDDQLNDRXELSSSRYGYITPPAFNSLKTIIKRIVVGPTHIALLTED
NRIARVAFTVLPDRLDLSKNEPNRNTNKNHVGNSNSAPNGNGSSGSGSRTGMSRSRARIM
RNSSAIRGGNSGGGSSSGGRIGPPGVIMGGGSGSSSRPIASVPAPFVPEDLISQAQVVLQ
GKSRNLIIRELQRTNLDVNLAVNNLLSREDEEGDDAEDAADSYVPEDLISLLDGGFSNEH
SVIIDADSMFSEDVFGYTGIRHRGSSSRRLGNDRENERSSHERDRDRDSFSRWRDRQYYG
PRRWLETALKDSWEKDSGNLYIKELASQSPLWISEELEWWHDRSNDPVPRFVQIASLYSE
LIAISISGQLYQWKWTESEPYKNAENPNVHHPKTISLALISEKIVNISATAIRCSVSTES
GKVATWLDELLGHVASRLEHPAQAFTEFTLDKIISLHTCALYTVARLESGTLYWWGVLPF
AQRKKLWEKYKAKSRKHRPSTVLSSDISYGTHVCMKNSPVYQPGAIGFTIANGVPKVGQL
LSAAWNVDATCRFKILPAGTHVSNTNTDKRESNGNGTTGVVNKPNHKETADRLDMPPPPS
PASSTCSDTGSITTSHKRAKRMAPRNEGESDRKDEEDWQLKDVVFIEDVKTVPIGKVIKV
DGCYVAVKFFSKEKEKEIKEKDFSTSDFKDFTAEEPMKLLADCRLLRKDELQVIKSSLNP
RAPDCFQRTPRRVNIVESSNDSLLTISTDGQGIHAILKSGNKLSYVVYNLSTGRYVQDCY
IPSDISSFLGLQPQNINLTSAGENIECSMILRDGNNTIYPIAKDCADAIRDPNWLDLVPV
NCIGAATIPISSSNSINLKNQVAVIALAFDNLLLMPRILRCDYESVKQIFCNLEQDLKNN
LTYSSANSQIQMILKERCDGNRNILHACVNMCSPTSNKETEQVIERELVSNTVDGTSAPI
EEPIPTLSWPPEAFDNTSGEEDSLLSIGAASISMMNKSAVGPASNNTYIIDSVERRHNAL
LILKYMCENNILAPHLKELLTAKDAQGQTPLMLAVSVRAYHAALILLDTIQRVGKDAKDT
SAMILPIDASPDLSPLFVTCCNDTCSFTWTGAEHINQDIFECRTCGLTGSLCCCTECARV
CHRGHDCKLKRTSPTAYCDCWEKCKCRALIAGHQGARYDLLCRLVNSTDLATKINSRGES
ILLFLVQTVGRQLVEQRQFRSAPRQRSTSASRKAPSSDGLSADSDMPDHDLEPPRFSRKA
LERLLNDWPAVQCMIMSGVSENGTDQLFGDQGQLCRQSGTALLDKFTHSLLVKCSAEMLD
TLLTTLIRELQDESVPGRQEEANNVARRFVRSVARIFVIFTIEMAPNTTKRRSTSQASQP
LMKCRKVFQALIKLAVEELCETADSLIAPVRLGVARPTAPFTLTSSAIEVINGSEELFSI
EPLIPHSGVSSQTLDAALQTQQGNNNITLSRGDVSAVDETEGGEEVPMDMDGDISEHEES
GVSGTATGQPLGEVDSNAGGVGEEQTGDGESDTELDLLAEAETESDSDDNHSNQDAASAQ
RSVQTGATAGSDGGMGSILLFPEDESGESSQQEDDESEAGETDEQDNEEFQIGDEQLERR
SGSSGHLHRNNLAPVYMQWAIRNRESNTRTAGLRVTGGSNLVFIDPASLRRTTATSAVAT
AQEPITMGTTASCLARAFGIVIRQIADLLVMVQDYKNLAPALPRLMEITFQDALNLQSYL
EAHLKPTWDWLLTVMDATEAQLRFGVSLTRSADPTHPEHPLNNAPSLSGGNFSGLLNTAA
LSLTLQGNTSRNPRSGITTSSNISAPQASTRLTVGFAGVGEPPRSSREREGSDAHSARRE
FLSYCLSLMRAHNSEHRDSLPVLDVSALRHVAYVFDALVYYMRSLSEPLASRGDTQKESS
SYSSWNDQDENDNDESEEYNSPAPTAMETDSVDYPDLLQIPICGSGNNGNSIPKGRKHPF
LQRSDSTLCLGCPPLDPFDTVMSEALPLADQPHLLQPHSRREDLFGIPRQPTYSITSGSS
QNPLEGLPTRLGLSTRGMDGQKNLTTPTFSQVVQGPLSNSNLESRRNSVSTDLNSIKYME
KLKPSNVNEGYSSLVTEQIIDRAPIIVSTNNQSDASSTKGKDICKNNRSVIVRAGTVSES
NTNKTGAPEILVIPTVESQNVSEEVDPAVTSHEISAHETVETSPVESARAVSSIGTNISH
NILLGRWRLSLDLFGRVFMEDVGLEAGSVVSELGGFPVKEAKFRRDMEKLRNSQQKDITI
KVERDRTQLLVQTMKELNTQYNIYNRRASNTPPLAVNRVKVFFKDEPGEGAGVTRSFYTA
IAEALLANEKLPNLEAAQVGSKYTQYNVLQKLKSRDRDRDLRRQNTRSSGKCRETRRPLS
FDARSFHPSNTIEGNNSSAPGSSSSTHPLPINHSPNDHLSLHQQQLGDRLYPKVHALRPA
LAEKITGMLLELSPAQLLMLLASEDALRQKVDEAFELIHSHTQDLTSEMLDLDVFSLTER
CAVSKKKMENSILDDTEDNAPLFYSPGKRGFYTPRQGRGSYERLNAFRNVGRLIGLCLLQ
NELCPLFLNRHVIKYILGRPIRFHDLAFFDSVIYESLRQLVIDAETKDSNSLFSALDLTF
SIDLCPEEGGGSIELVPNGRDVEVTASNVYDYVRKYAEIRMIKVQEKALHSMREGVFDVL
PEGALDGLTSEDLRLLLNGVGDINVSVLISYTSFNDESGESTERLVKFKRWLWSIVEKMS
HVERQDLVYFWTGSPALPASEDGFQPMPTVTIRPADDAHLPTANTCISRLYVPLYSSRHV
LRHKLLLAIKSKNFGFV
NT seq
8514 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaatccacttcgttgtacatcctttaccgggaaccgacgaccaacttaatgat
aggtaagaactttcatcctctcgatatggatatataacaccgccagcttttaattctctc
aaaacaataataaagcgcatcgtagttggaccaacacatatcgctcttcttacagaggac
aatagaatagctagagttgcatttacagtattaccagatagattggatttgagtaaaaat
gaacctaacagaaatacaaataaaaatcatgttggaaactctaattctgcaccgaatgga
aatgggagtagcggaagtggtagtagaacaggaatgtcacggtcacgcgcccggattatg
cgaaacagttctgcgatacgtggaggtaatagtggtggaggaagcagcagtggtggccgt
atagggccacctggagttattatgggaggaggaagcggtagtagttctcgtcctattgct
tctgtgccagcaccatttgtaccagaagatcttatatctcaggcacaagttgtattgcag
ggaaaaagtcgtaaccttattatcagagaattacagcgtacaaatctagatgtaaactta
gcagtaaacaatcttttgtcacgagaagatgaagaaggtgacgatgcagaggatgcagca
gatagttatgtcccagaagatcttatatcattattagatggtggctttagtaatgaacat
tcagttataattgatgctgactctatgttctccgaagatgtatttggatacactggaata
aggcatcgcggaagttcttcgcgccgtttaggtaatgatagagaaaatgagcgttcatct
catgaaagagatcgagatcgtgacagttttagcagatggcgagatcgtcaatattatgga
ccacgtcgttggttggagaccgctcttaaagattcatgggaaaaagattcaggtaattta
tacataaaagaattggcttctcagagtccactatggatatccgaagaattagaatggtgg
cacgatcgcagtaacgatccagtgcctcgttttgtacaaatcgcatcgctttacagtgaa
ttaattgctatttctatatcgggacaattatatcaatggaaatggacagaatcggaacca
tataaaaatgcagaaaatccaaatgtgcaccatccaaaaaccatttctttggcattaata
tcagaaaagatagtcaatatatctgctacagcaattcgatgttccgttagtacagaaagt
ggaaaagtagcaacttggcttgatgagcttttaggacatgtagcttcccgtcttgagcat
ccagcacaagcgtttactgaattcacattggataaaattatatcacttcatacatgtgct
ttatatactgttgcaagacttgaaagtggaacattatattggtggggtgttttacccttt
gcacagcgaaagaaattatgggagaaatataaagctaaatcacgcaaacataggccatct
actgtattatcaagtgacattagttatggaacacatgtatgcatgaaaaatagtccggtt
taccaaccaggagctattggatttacgattgctaatggtgtaccaaaagtggggcaattg
ctatctgcagcatggaacgttgatgctacttgcagatttaagatattacctgctggtaca
catgtatctaataccaatactgataaacgcgaatctaatggaaatggaactacaggagtt
gtgaataaaccgaatcacaaagaaacagctgatagacttgatatgccgcctccgccatct
ccagcttcgagtacttgtagtgatactggcagtattacaacaagtcataaacgtgcaaaa
cgtatggcaccccgaaatgaaggtgaatccgacagaaaggatgaagaagattggcaatta
aaagatgttgtttttattgaggatgtcaagactgtacctattgggaaagttataaaagtt
gatggttgctatgtcgcagtcaaatttttttccaaagaaaaagaaaaagaaattaaagag
aaggattttagtacatccgatttcaaagattttacagcagaagaaccaatgaaattatta
gcggactgtagacttttacgtaaagatgaattacaggtaattaaatcatcgttaaatcca
cgagctccggattgctttcagagaacgcctagaagagtcaacatagtggagagttcaaat
gatagtttattaactatatctactgacggacaaggtattcatgccatattgaaaagtgga
aataaattaagttatgttgtatataatctaagtacaggaagatatgttcaagattgttat
attccatctgatatttcatcatttttgggattgcaaccacaaaatattaatcttacaagt
gcaggagaaaatattgaatgttccatgattttacgcgatggtaataataccatttatcca
atcgcaaaagattgtgctgatgccatacgcgatccaaactggttggatctggttccggta
aattgcattggcgcggcaactattcccatttctagctctaattcgatcaatctaaaaaat
caagtcgctgttatcgcattagcatttgacaatcttttacttatgccgcgtatattgcga
tgtgattatgagagtgtaaagcaaatattttgtaatttggaacaagatctaaaaaacaat
ttaacatattcaagcgctaattcacaaattcaaatgatattaaaggaacgatgcgatggc
aatcgaaatatacttcatgcttgtgttaacatgtgttcgccaacatctaataaggaaact
gaacaagttattgaacgtgaattagtatcaaatacggtagatggtacctccgcacctatt
gaagagccaattccgacattaagttggcctccggaagcatttgataatacatcaggagaa
gaggacagtttattgagcataggtgctgctagtatatctatgatgaataagtctgctgtt
ggacctgcttctaataatacatatattatagattccgttgaaaggcgacataatgcatta
cttatattaaaatatatgtgtgaaaataacatcttggcgccacacttaaaagaattatta
acagcaaaggatgctcaagggcaaactccactcatgcttgctgtatcggtacgtgcgtat
catgcagctcttattttattggatactattcaaagagtaggcaaagatgcaaaagatact
tcagccatgatattaccaattgatgccagcccagatttatctccattgtttgttacttgt
tgcaatgatacatgtagttttacatggactggagcagagcatattaatcaagatattttc
gaatgcagaacatgcggtttaacggggtctttatgctgctgcactgaatgcgctcgtgtt
tgtcacagaggccatgattgtaagcttaaaagaacttcgcctacagcatactgtgactgt
tgggaaaaatgtaaatgtcgtgctctcattgccggacatcaaggggcgagatacgacttg
ctatgtcgtcttgtaaacagtaccgacctcgctacaaaaattaattcacgaggtgaaagc
atcttgttatttttggtgcaaacggttggaaggcaattagttgaacaacgtcaatttaga
tcagcacctagacaacgatcaacttcggctagtcgtaaagcaccttcatcagatggtttg
agtgcagattcagacatgccagatcatgatttagaacctcctcgatttagtcggaaagcg
ctcgaaagattattgaatgattggccagccgttcaatgtatgattatgtcaggcgtttct
gagaacggtactgatcaattatttggtgatcaagggcagttgtgtcgacaaagtggcact
gcattattagacaaatttacacattccttacttgttaaatgtagtgccgaaatgctcgat
acattgctcaccactttgatcagggaattgcaagatgagtctgtacctggacgacaagaa
gaagcgaataatgtagcgcgccgattcgtgagatctgtggcacgcatattcgttattttc
actatagaaatggcaccaaatacaactaaaaggcgaagcacaagccaagcctcacagcct
ttaatgaaatgtcgaaaagttttccaagcattaatcaaattagctgtagaagaattatgc
gaaacggcagattcattgatagcaccagtcagattaggcgtagcacgtccaactgcgcca
ttcacactaacgagttctgccattgaagtaatcaacggctcggaagaattattttctata
gagcctctaatacctcacagtggcgtaagttcgcagacattggatgcagcactgcaaacg
caacaaggaaataataatataacattatcaagaggggacgtctctgctgtagatgaaaca
gaaggtggagaagaagtacctatggatatggatggcgatattagtgaacacgaagaatcg
ggagtttctggaactgccaccggacaaccactcggcgaagttgactcgaatgccggtgga
gtaggtgaagagcaaacgggagatggtgaatctgatacagaattggatcttttggcagaa
gctgaaactgaatccgattcggatgataatcatagtaatcaagatgcagcatcagcgcaa
cgtagtgtgcagacgggtgcgactgcaggatctgacggtggaatgggatcaatattatta
tttcctgaagacgaatctggagaatcaagccaacaagaagacgatgaaagcgaagcaggg
gaaacggatgaacaagataacgaagaattccaaatcggcgatgaacaattggagcgcaga
agtgggtcctctggccatttgcatcgtaataatctcgcgcccgtatatatgcaatgggca
atacgtaatcgtgaatcgaatacgcgtacggcgggattacgagtaacgggtggaagtaat
ctggtgtttatcgatcccgcatctttgagacgtactactgccacgtcggccgtcgcaact
gctcaggaacctataactatgggaactactgctagttgcttggcacgagcattcggaatc
gtcattcgacagattgctgatttattggtcatggtgcaagattataagaatttagcacct
gccttaccacgtttgatggagatcacttttcaagatgctctaaatttgcagtcgtattta
gaagcgcatttgaagcccacttgggattggttgctcaccgtaatggacgctacagaagca
caattgagatttggagtatctctgacgcgtagcgcggatccgactcatcctgaacatcca
ctcaataatgctccgtctctttcaggcggtaattttagtggtctattaaatacagccgct
ctttcgctgactctacaaggaaatacaagtcggaatcctcgtagtggtattactacgagc
tcgaatatctccgctcctcaagcttcaacgcgactcaccgttggttttgcaggcgttggc
gagcctccaaggagcagtagagagcgtgaaggtagcgatgcacactcggcgagacgtgaa
ttcttgtcatactgtctatctttaatgcgcgcccacaatagcgagcatagggatagtttg
ccagttttggatgtttctgctttaagacatgttgcttatgtattcgatgcacttgtatat
tacatgcgttctctttcggaaccactcgcttccagaggcgacactcaaaaagaatcatcc
agttattccagttggaacgatcaggatgagaatgataatgacgaaagcgaggaatataat
tcgccagcaccaactgctatggaaactgattccgtagattatccggatttacttcagata
cccatatgtggatctggaaataatggcaattcgataccgaaaggaaggaaacatcctttc
ctacaaagatcagattctactttgtgccttggttgcccgcctctagatccattcgacacc
gtaatgagtgaagcgttaccattagctgatcaaccacatttattgcagccgcactcaaga
cgcgaagatctatttggtataccaagacaaccaacttattctattacaagtggatctagt
caaaaccctttggaaggtttaccaacaagattaggtctctctacgcgaggtatggatggt
caaaaaaacttgacgactccaacattcagtcaagttgtacaaggaccactttctaattct
aatctagaatcgagaagaaattccgtttcaactgatctaaattctatcaaatatatggaa
aaattaaagccgtctaatgttaacgaaggatactcttctcttgtaacggaacaaatcatc
gatagagcaccgattatagtatctacaaataatcaaagtgatgcctcgagtactaaaggc
aaagatatatgcaaaaataataggagcgttatagttagagctggaacagtttcggaatca
aacacgaataagactggtgcgcctgaaatattagtcattccaactgttgaaagccaaaat
gtatccgaggaagttgacccagccgtcacaagccatgagatatccgctcatgaaaccgtt
gaaacaagtccagtagaatctgccagagcagtatcatcgattggaacgaatatctctcat
aacattttattaggacgatggcgattatcattggacctgtttggacgggtttttatggaa
gatgtaggtttagaagctggatcagtagtgtccgagttaggaggatttcctgtgaaggaa
gctaaatttcgccgagacatggaaaaacttagaaattcccaacaaaaagatatcaccata
aaggtggaacgagatagaacacagttactagtacagacgatgaaggaattaaatacacag
tataatatatataatagaagagcttcaaacactccacccttggcagtgaatcgggttaaa
gtttttttcaaagatgaacctggtgaaggagctggtgttactcgaagcttttatactgca
attgctgaagcattgctagcaaatgagaaactcccgaatcttgaagcagcacaagtggga
tcaaaatatacgcaatataatgttctacaaaaactgaaaagtagagatcgtgaccgtgat
cttagacgacagaatacacgttcttctggaaaatgtcgtgagacgcgtcgtcctttatcc
ttcgatgctcgctcttttcatccctcaaatacgattgaagggaataatagttcagcacct
ggaagttcatctagtactcatcccttgccaattaaccattcgcctaacgaccatttgtct
ttgcatcaacagcaacttggcgacagattgtatcctaaggtacatgctttacgaccagcg
ttggctgagaaaataactggcatgttgctagaattgtcaccagctcagttactgatgtta
ctggcttcggaagacgctcttcgacagaaagtagacgaagcgtttgaattgattcacagt
catactcaagatttgactagcgaaatgttagatctcgatgtatttagcttaaccgaacgc
tgcgcagtaagcaagaaaaaaatggaaaacagcattttagacgatacagaggacaacgct
ccacttttctattctcctggtaaacgcggtttttatacaccgagacaaggtagaggtagc
tacgaacggttaaatgcattcagaaatgtaggcagactcataggactatgtcttttacaa
aacgagctttgtccgctatttttgaaccgccatgtaatcaaatatatactaggaaggcct
atacgttttcacgaccttgcattttttgattccgttatttacgagagcttgcgacaattg
gttatcgatgctgaaacgaaagatagtaacagtttattctctgcgttggatcttacattc
agtattgatttatgtcctgaagaaggaggtggttcaattgaacttgtacctaacggtcgt
gatgtggaagtgactgcgagtaacgtatatgattatgtacgtaaatatgcagaaattcgt
atgatcaaagtgcaagaaaaagctttgcattctatgcgcgaaggagttttcgatgtcctc
ccagaaggagcgctcgatggtttaacttcggaagacttgagacttcttctaaatggagtt
ggtgatatcaacgtatcagttttaatatcatatacgtcatttaacgatgaatctggtgaa
tcgacagagagattggtcaaatttaagcgctggttatggtctatcgttgagaaaatgtca
cacgtggaaaggcaagatttggtatatttctggactggctctcctgcgctaccagcaagc
gaagatggttttcaaccgatgccgaccgtgacaattcggccggcggatgacgcgcatcta
ccaactgcaaatacatgtatttcccgactatacgttccactgtacagctcccgtcatgtt
ttgcgacacaaactacttctcgctattaaatcaaagaatttcgggtttgtatga
DBGET
integrated database retrieval system
