Pogonomyrmex barbatus (red harvester ant): 105424406
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Entry
105424406 CDS
T04903
Name
(RefSeq) transient receptor potential channel pyrexia-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbar04040
]
105424406
Ion channels [BR:
pbar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105424406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
105424406
NCBI-ProteinID:
XP_011632918
UniProt:
A0A6I9VZY9
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MSLTQRNGQIAQECNPYHAFILAIENGEFDNVNRILMRDNINEYVHPVGALQVTALQVAA
WQGNIDLLNQLHDRGADVNSQDRIGRSALYYAAHNGDVNVTNWLLQRGACVNVKTGVHSC
SRSPSRNVSNSSLTRSHGIGRKLPLPERYGRTPLHEAVKNNHAEVVRILVKNGADVNAND
DGQITPLLLAGSMVNRDDLNKMTKFVEIIKILVDAKVDVDVAHPETGTTALHHAAKLGSA
QATQILLSNGAKPMQTCKNSKKQAESTPLHIAASIGNIETLMVLLEAIPSCDIDTPDQVN
RTALHRASYNGHRECIRALINYEANLAAVTETGITVVDAIFAHISQPLAFLTDILNSCVQ
TTSSTKGSYENITVDFGILTPKCQMQMSVVTAIIAASSDITQLAILQHPLVETFLRLKWT
RLRILFFVLMFVHLFFVISLSVYAIMLVRDNTDHVITRRILTLCSCILLFHNTIQVILEP
RHYLRQLETWLSFICVMLSLVTSIAGEFVMCSQEENDSQYCVQWLLHPISIALLLSWMQM
MLLIGRVPMWGYYALMFSTVLKNLLKVLLAFGYLIIGFALSFAVLFHGNNQFHHFGNAIV
KTIVMMMGEYEYKELFNMEKNDTSIDSEITFLPVTSRIVFFIFIMLASIVLMNLMIGLAV
NDIQDLEKEGHIRRLLKQAEFVAHLERVLSHRIFRSKWIPRRIRILLQSRREIPTKIILY
PRENYFNYMTYFEKEAPPKIPTNLIEALFVLATKTSFKNDSSMDRSVEIGDTNLIPILSN
LEEQIRELKAYCYRNLTNRKPSKRRVFKRRQRRLVNS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgacacaaagaaacggacagatcgcgcaagaatgcaatccgtatcacgcgttc
atattggcgattgagaacggagagtttgataacgtgaatagaattttgatgcgcgacaat
ataaatgaatatgtacatccggtgggtgctcttcaagtgacagcccttcaggtggctgcg
tggcagggaaacatagatttgttgaaccaacttcatgacagaggtgctgatgtaaacagc
caggatagaattggtagatctgccctttattacgcggcacataatggcgatgttaatgta
accaactggcttcttcaacgcggagcatgcgtcaacgttaaaactggtgtccattcgtgt
agcaggtcaccaagcaggaacgtgtcaaattcttcgctgacaagatcccatggcataggg
aggaagttgccgttacccgaacgctatgggagaacgccgttacacgaagcggtgaaaaat
aatcatgcggaggtcgttcgtattttggtgaaaaatggtgcggatgtgaacgctaacgat
gatggccagattacccctttgctcttagcgggaagcatggtgaatcgtgatgatctcaac
aagatgactaagttcgtcgagatcatcaagatcctagtcgacgcgaaagtagacgttgat
gtagctcatccggagacgggtaccactgctttgcatcatgcggcgaaactaggcagtgca
caagcgacacaaatattattgtcaaatggtgcaaagccaatgcaaacatgtaagaactcc
aaaaagcaagcggagagcacacctcttcatatcgccgcgagcataggaaacatcgagaca
ctaatggtgctacttgaagcaataccatcttgtgatattgacacgcctgatcaggtcaat
cgtacggctcttcatagagcgtcttacaatggtcatcgcgaatgcatacgagctttgatt
aattatgaagctaatctagctgcagtgacagaaactggcattactgtcgttgatgctata
ttcgctcatatttcacaaccattggcatttttaaccgatattttgaattcttgtgtacaa
acgacaagttctacaaaagggtcttatgaaaacatcactgtcgattttggtatactgact
ccaaagtgccaaatgcaaatgtcagtagttacagctattatagccgcatcttcggacata
acacaactggcaatattacagcatccacttgtggagacatttctcagacttaaatggacg
agattaaggatactcttctttgttcttatgttcgtgcacttgttcttcgttatttctctt
tcggtctatgctataatgcttgtacgtgataacactgatcatgtgataactcgaagaatt
ttaactctttgttcctgcattcttttatttcacaatacaattcaagttatattagaaccc
aggcattatctgagacaactagaaacatggttatcattcatctgcgtcatgctatcccta
gtgacgtcgatagcgggcgagtttgtgatgtgctcacaggaagaaaatgattcacaatat
tgcgtgcagtggttgctacatcccatcagtatcgcactcttgttgagttggatgcaaatg
atgctattaattggacgagttccaatgtggggatattatgcactcatgttttctacagtg
ttgaaaaatctcctaaaagttcttttggcatttggctacttgattatcggatttgcgttg
agttttgccgttttatttcacggaaataatcaatttcatcatttcggaaatgccattgta
aagactatagtaatgatgatgggcgaatatgagtacaaggaactgttcaacatggagaag
aacgatacgagtattgatagcgaaattacttttctgccagttacaagcagaatcgtattc
ttcatcttcatcatgctcgctagtatcgtcttaatgaacctcatgattggtctggcggtc
aatgatattcaagatctcgaaaaagagggccatatacgtcgattattgaaacaagcggaa
tttgtcgcacatttagagagagtattgtcacatcgaatttttcgcagcaaatggatacct
cgtcgcatacgaatattgcttcaatcgagacgcgaaattcccacgaaaattatattatat
cctcgtgaaaattattttaattatatgacttactttgagaaggaggcgccgcctaagatt
cccaccaacctaatagaagctttatttgtattagccaccaagacgtctttcaaaaacgat
agctcaatggacagaagcgtagagattggcgatacgaatttgattcctatattatccaat
ttagaagaacaaattcgggaattaaaagcatattgttatcgtaatttaacaaatcggaaa
ccatcaaaacgacgcgtgttcaagagaaggcaaagaagacttgtaaattcctaa
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