Pogonomyrmex barbatus (red harvester ant): 105424447
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Entry
105424447 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105424447
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105424447
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
105424447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
105424447
NCBI-ProteinID:
XP_011632989
UniProt:
A0A6I9WMG8
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MVHKFTDSIEFLYVEETRTDAIDEVSRSLGDIFEGDPRRVWAAVRYQRALAATFPRTDNW
TKHNRGRISCITSPHVDCHQHCCGAMSIWRVDEVNGQDVSNSSHEDAVRCFQSAQEPIIV
EVLRRQPSGHQQVLHTTSKEPERITCQDKNEGTMNEKGVADDQMYNDDIKKDNSTCSLVS
TGVQTDWAGLIEEEELLSVPLVEEQANDSFEDFLAHDIDFEEVTLQKSGSAEKLGLTVCY
SSGSGSEDADTEVYISEIVPESLAARDGRLREGDQILRVNGKDVANKEQTEXLFAETKNA
VTILVSRCVYQDDEYDDRRIYHQNSPLPSPENVPAYQNSMIEQLIRQQQQQTEECAKESE
VNNCILKAPPPIPSHTHQQQQQSVNIFSTNSSSTCSSQNSHKSGKNATSPAHTEERNKQW
MQESLKDCSKRLESISLRGQQSGPPAATPPSVKLIEAYSNHVWSDIEHIYETIPESDSEP
IYSSPYEHHQQHWMQQANHVIASTTQLQHIGTTQNHLAGGQQIQKWHSSSKSNSSGEEKD
SSSAYNTGESCHSNPLTLELHQGERDHHKSTLVLCPPKTSQQQQQKLLGCNCPMPSATSV
ITRQSSKNQSIRKGSHHHRDRNESLSVNVNTLPADTMYTNVANLQQTMMLQQQLFKQALN
RKTLTTSRETASGTRKSKSHGNFQAPNLTQYQFVSSQQVCTSTCVPPEDKSEVQMEWKVK
RRADGTRYIARRPVRNRILRNRAIKITEERAGHTTEDDTMSEMKIGRYWSKEERKRQLDR
ARERKQRQQEVIVQQQQQQQQQQQQTNDQLICEHIEDKVLKKPLTIVELSHKKMARKKTT
LDDFTTVQEMLVHGNRVGAGGPGTGGKLTGLLSVTTV
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggtccataaattcaccgactctatagaatttctctacgtcgaagagacaaggaccgac
gcgatcgatgaggtatctcgatcactcggggatatattcgagggagatccgaggagagta
tgggccgcagtgcgttatcaacgtgccttggccgcaacgtttccgcgcacggacaattgg
acgaaacacaatcgtggtcgaatatcatgcataaccagcccgcacgtcgactgtcatcaa
cattgttgcggtgcgatgtctatctggagggtcgacgaagtgaatggacaggatgtttca
aactctagtcacgaggatgctgtacgctgcttccagtcggctcaagagccaattattgtt
gaggtcctccgtcgacaacccagcggacatcaacaagtacttcacactacctcaaaagag
cctgaaaggattacatgtcaagataaaaatgaaggaacaatgaacgagaagggcgtggca
gatgatcaaatgtataacgatgatatcaagaaagataattcgacgtgttccttagtgtcg
actggggttcaaacggattgggctggtctcatagaggaggaagaattactttcggttcct
ctcgtcgaagaacaagcgaacgatagttttgaagattttctcgctcatgatattgacttt
gaggaggtgacattgcagaaaagcggaagtgccgagaagcttggattgacggtatgctat
agctccggttctggcagcgaagatgccgacactgaggtttacatttcggaaatagttcct
gaaagtcttgcagctcgggatggtcggttgcgagaaggagatcaaatcttgcgggtcaat
ggcaaggatgttgcgaacaaggaacagactgaannattattcgcagagacaaagaacgca
gtgacaattctcgtcagccgatgtgtatatcaagacgatgaatatgatgacaggcgcatt
tatcatcagaattcgcctctaccttcgcccgaaaacgtaccagcctatcagaatagcatg
atcgagcaattgattcgtcaacaacagcagcaaacggaagagtgtgccaaagagagcgaa
gtaaacaattgcattttaaaagcgcctccacccataccatctcatactcatcagcaacag
cagcaatccgtcaacattttttccacaaactcatcatccacgtgctcgtcacaaaactca
cataagtctggcaagaatgcaacctcaccggcacacacggaggagcgtaacaaacaatgg
atgcaagaatcattaaaggattgttcgaagaggctcgaaagtatatcactacgcggccaa
caatctggtccgccagcggcgacaccaccatcagtaaaactcatcgaagcgtattcgaac
catgtgtggagcgatatcgaacatatctatgaaacgataccagaatcagacagcgaaccg
atctattcgtcaccatacgaacaccatcaacaacattggatgcagcaggcaaatcatgtt
attgcctcgacaacacagttacagcatattggtaccacgcaaaatcatctcgctggtgga
cagcagattcagaaatggcattcttcttcgaaaagcaacagctctggcgaagaaaaagac
agttcgagtgcttataacaccggcgaatcttgtcatagcaatcctttaactctagaatta
catcaaggtgagagggatcatcacaaaagtacattggtgttatgtccgccgaaaacatcg
cagcaacaacagcagaaattgctcggttgcaattgtcccatgccgagcgcgacatccgtg
ataacaagacaatcgtcgaagaatcagagcataaggaagggttcgcatcatcatagagat
cgtaatgagtctttgtcggtaaatgttaatacgctgccagctgatactatgtacacgaac
gtggcaaatctacagcagacaatgatgttacaacaacaattattcaagcaagcactcaac
cgtaagactctcacgacatctagggaaacggcgagcggtacaagaaagtctaagtcacat
ggcaatttccaagcaccaaatctcacacaataccaatttgtcagtagccaacaagtatgc
acatccacgtgtgtaccaccggaagacaaaagcgaggtacagatggaatggaaagtaaaa
agaagagcagatggaacaagatacatcgctaggcgccctgttagaaatcggatacttcga
aatcgagcgattaagataactgaagagagagccggtcatactactgaagacgatactatg
tcagaaatgaaaatcggacgatattggagtaaagaggagcgtaaacggcaattagaccgc
gcacgcgaacgcaaacaacgacagcaagaggtaatagtgcaacagcagcagcaacaacaa
caacaacaacaacagactaacgatcaactaatatgcgaacatatagaagacaaagtgtta
aagaagccattgactatcgttgagctgagtcacaagaaaatggcgcgtaaaaaaaccact
ctggacgatttcaccactgtacaagaaatgttggttcatggaaacagagtgggtgcaggt
gggcctggcacaggaggaaaattaacgggccttctgtcggttactacggtgtaa
DBGET
integrated database retrieval system
