Pogonomyrmex barbatus (red harvester ant): 105424476
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Entry
105424476 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin-like
KO
K27892
neural-cadherin
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pbar04515
]
105424476
Cell adhesion molecules [BR:
pbar04515
]
Cadherins
Cadherin related
105424476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
Laminin_G_2
Laminin_G_1
CADH_Y-type_LIR
Cadherin_CELSR2_9th
RET_CLD1
EGF
hEGF
EGF_Teneurin
Cadherin_3
EGF_2
EGF_TEN
RnlA_toxin_N
ResB
Motif
Other DBs
NCBI-GeneID:
105424476
NCBI-ProteinID:
XP_011633027
LinkDB
All DBs
Position
Unknown
AA seq
2978 aa
AA seq
DB search
MWRARVIVFLLAATSVTYAKVAVLPHDVYPGYEVTQFRRDASRASNFRLLETGFSKYFTV
LGNGLVMTTSDLTPLVDRSVNLIVLEELANGTQTHDLHLYVINRRNMLTFSHDRLGEGEV
PENSSVGTRIDGFPVLRARGNFPVHYKILPSDNGERPFALRESESDETGFNLTLKSQMQG
VRVVTAKPLDREIRGIYTVVIHASDGNFLSTSKISGIVHVLDQNDNSPIFERQLYIFEIR
PTNLDILRKGNVAQPGWKRFSTVGKVTAKDADGDKVAYKLVTPNSLLIVVPQTGELLLTG
EPEVNPEQDSECELIVEAHDLRMPSRSTEKPAKVIVRFLTSEPDDDPPEVHRIQKRRVTR
AVRPTKKVDFTEADGNIEGKIAFYLEKENEKETYKIRDENKWVTVGANGSVMVKQKWDYE
ELGPEKTIDFWVTITNTGTEPCARYPPGVSCPFYDDTDNQRVIINMKDVNDEPPYFINRP
LPMQTVVQLNAPPNTHVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDL
FQLDMEYVLYVKAEDQNGRIDERRFQSTPEERLSIVGGKRAPQFYMTAYEAEIPENQKKD
SDIISVKAKSFADREIRYTLKAQGQGAAGTFNIGPTSGIVKLAKELDFEDLRQPHIYSLI
VTATEDSGGFSTSVELTIRVSDVNDNXPKFELPDYQAHNVDEDIPLGTNILKDKAHIREP
SKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFRFVG
GNTTSGQFVIEEITGVIRLHGKEISLDRDKYELNVTALDDGACCPNGDKTIHTSTAVVVV
FITDVNDNKPVFKDCGMYYPKVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKG
TKFTVDEETGQVLTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPP
LFDRQRYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLSSPNNQQNLEYFEIQPESG
WIVLKKPLDGCFPRETYKLEAMAKDRGYPPLSRTVEVQIDVVDRANNPPVWDHVVYGPIY
IKENMAVGAKVVSIKASSGIDNNPTVFYHLMPGSTAQTNKFHTFYLQQRAEQSTTWADIK
VNHPLDYESIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEP
VGSKVTQVNAIDKDGTFPNNQVTYYVVNSDRNEGKDFFEINRETGEIFTKIMFDREKQGA
YALEVEARDGAASARPNSNGQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQH
TVLTVTAKDHDESSRIRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRKRYELRLTASD
NLKENYTTVVIHVKDVNDNPPVFERPNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNI
VYFLTGQGIDPDNPANSKFDINRTSGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLV
GYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGTNARLIYS
IEKNVIEEETGSPIFEIESETGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIR
VKDINDMPPQFTKDEWFTEVDETEGPDLPEMPILTVTVHDEDETNKFQYKVIENSGYGAD
KFTMVRNNDGTGSLKIVQSLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKL
RDINDNQPQFEKANIETTVPENARIGSSLETFKATDPDQGGKSKVSYSIDRSSDRKRQFF
INENGTVSIQRSLDREETPRHQVKILAIDDGIPPKTATATLTVVVQDINDNPPRFLKDYR
PVLPEYAQTKKVVEILATDDDDRSRSNGPPFTFRMDPNANDVIRASFKVESDNKGANGDG
MAVVSSLRSFDREQQKEFLIPIVIKDSGNPSMSGTSTLTVIIGDVNDNKMQPGSKEIFVY
NYAGQSPDTEIGRVYVYDLDDWDLPDKKFYWEGLEHAQFKLDEDSGMIFMKSGTHDGKYH
LRFKVYDRKHTQTDVPANVTVTVKSIPHEAVLNSGSVRIAGITDEDFIRVWNYQNQTLSR
SKADLFRDKLSHLLNIDRENVDVFSVQLRRVHPPLTDVRFAAHGSLYYKPVRLNGIVLMH
REEIEKDVGINITMVGIDECYYENEMCEGSCTNTLDISNLPYMVNANRTALVGVRVDVIA
ECTCGARNFSKGESCRNSPCYNGGRCVEDRFGLSCQCPSGYNGPRCQQTARSFRGNGWAW
YPALEMCDNSHLSFEFITRKSDGLLLYNGPIVPPEVDEIMVSDFISVELERGIPRLLIDF
GSGTLELKVKPKKTLDDGEWHRLDIFWNTETVKLIIDYCKSAEVSELEDGSPPEFNDTTC
QATGTIPPFNEYLNVNAPLQIGGLYVEQFDPTHYKWKHMPVGKGFDGCIKNLFHNSKLYD
LAHPGLSRNSVAGCPQTEEICNNQESTFRCWEHGTCVGSFTEARCQCNPGWTGPGCMTPT
IPTTFKPQSYVKYALSFEPDKYSTQVQLRFRTREIHGELFRVSDQHNREYAILEIKDSRL
HFRYNLNSLRTEERDIWLSAIAVDDGQWHTVRVSRYGSAATLELDGGEGRRFNETFSFEG
HQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKGCLDDIRLEGKHLPLPPAMNGTQWGQ
ATMARNLERNCPSNKPCANVICQDPFECIDLWNEYDCTCGEGRIPSPDNKGCMDKNECID
YPCLNGGRCINQDPRFRYRCICPDGFWGENCELVQEGQTLKLSMGALAAILVCLLIILVL
VLVFVVYNRRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPIPEM
SGKLPPCKIAYPLGPEPNVGVFIEDHKKRADSDPNAPPFDDLRNYAYEGGGSTAGSLESL
ASGTDDEQHEYEYLGAWGPRFDKLADMYGPAEESEEEE
NT seq
8937 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgcacgggtcatcgtcttcctactggcagccacttctgtcacctacgccaag
gtggctgtgttgccgcacgatgtctatcctggttacgaggtgacgcaattccggcgcgat
gcaagtcgtgcctcgaacttccgtcttctggagaccggtttctccaagtacttcaccgtg
ctgggtaacggcctggtgatgacgacatcggacctgacgccgttggtggatcgctcggtg
aacctgatcgttctggaagagctggccaacggcacgcagacccacgatctccatctctac
gtcatcaatcgccgaaacatgctgaccttctcgcacgatcgtctgggcgagggtgaagtg
ccggagaactcgtcggtcggaacgcggatagacggctttccggttctgcgggcgcgcgga
aactttccggttcactataagatcttgccgagcgataacggagaacggcccttcgcttta
cgagagagcgagtccgatgaaaccggcttcaatctcaccctgaagagtcagatgcagggc
gtcagggtggtcacggcgaaacctttggatcgcgagattcgcgggatctacaccgtcgtg
atacacgcgtcggacggtaacttcctcagcacgtcgaagatcagcgggattgttcacgtg
ctcgatcagaacgacaacagtcccatcttcgaacgtcagctatacatcttcgagatcaga
ccgaccaacttggacatcttgcgcaaaggcaacgtggcgcaaccgggctggaagaggttc
tccaccgtgggcaaggtcacggccaaggacgccgacggggacaaggttgcgtacaagttg
gtcacgcctaacagcctgctgatcgtcgtaccgcaaaccggtgaattgctgctgaccggc
gagccggaagtcaatccagagcaggacagcgagtgcgaattgatcgtcgaggcacacgat
ctacgcatgccgagccgcagcaccgagaaaccggccaaggttatcgtgaggttcctcacc
tcggaaccggacgacgatccaccggaagtacatcgtatacagaagagaagagtcaccaga
gcggtgcggccgacaaagaaagtcgatttcacggaggcggacgggaatatcgagggcaag
attgcattttatctggagaaggaaaacgagaaggaaacctataagataagagatgagaac
aagtgggtcaccgtgggtgccaacggatccgtaatggtaaaacagaagtgggactacgag
gaattgggcccggaaaagactatcgacttctgggttactattacgaacacaggtacagag
ccgtgcgcgcgatatccacccggtgtctcgtgcccattttacgatgataccgacaatcag
cgcgttatcatcaacatgaaggatgtgaacgacgagcctccctatttcattaatcggcca
ctaccgatgcaaacggtcgttcagctgaacgcaccaccgaacactcacgtgttcaccctt
caagccagggatcctgacaccgaccacaacatccattacttcatcgtgcgagatcgaact
ggcggtcgctttgaggtcgatgagagatcaggagtagtacgtactcgaggtaccgacctc
ttccagctggatatggagtacgtcctttatgtgaaagctgaggatcagaacggccgtatc
gacgagaggcgtttccagtcgactcctgaggagagactatcgatcgtcggtggaaaacgc
gcaccgcagttctatatgacggcgtacgaggctgagataccggaaaatcagaagaaagac
tccgacataatatcggtgaaagccaagtctttcgctgatcgggagatacgctacacgctg
aaggcgcaaggtcaaggagccgcgggtacattcaacatcggtccgacttctggaattgta
aaacttgcaaaagaactggattttgaggatctgcggcagccccacatttattctctgata
gtaacagcgacagaggactctggtggtttctcgacatcggtcgagctaacgattcgagtg
tcggatgtaaacgacaacngccctaaatttgaactaccggattaccaagctcacaatgtc
gacgaagatattccactgggcacgaacatattaaaagataaagctcacattcgtgaaccc
tcgaagaccggcacagcgacagtgcggatatacacgaagaataaaaacgacgaggaacca
aagttctctcagcaagtttacacgcctaacgtcgacgagaatgccggaccgaatactttg
gtcaccaccgtagtcgcttccgataaggacggcgataacgtgcgcttccggttcgtcggc
gggaacaccacatcgggacaattcgtgattgaggagatcacgggcgtaattcgtcttcac
gggaaagaaatctctttagatagagacaaatacgagctgaatgtcacggctctagacgac
ggggcatgctgtcctaacggcgataaaaccattcataccagcactgcggtcgtcgtagtc
tttataaccgacgtgaatgacaataagccggtcttcaaggattgcgggatgtattatccg
aaagtggaggaaggtgcgccaaatggcagcacggtcattaaagttcaggcgactgacgag
gataaaggtgtcaatggacaagtcaagtattcgatcgtgcaacagcctaatcagaaaggc
acaaagtttaccgttgacgaagaaaccggccaggtcttaaccaataaggtgttcgatcgc
gaaggcgatgatggaaaatttgtatccgtcaccgttaaggcgacggatcagggcgaaccc
tcgttggaaggtgtttgctcatttaccgtcgaaataacggatgtgaacgacaacccgcca
ctgttcgaccgacagagatatgtggaaaacgtaaagcaggatgcgagcattggaacgaac
atattaagagtgtcggcatccgacgaggatgctgacaacaatggcgcgatcgtgtactcg
ctgagctcacccaacaaccagcagaatctggagtactttgagatccaaccagagtctggt
tggatcgtgttaaagaagcctctagacggctgttttccacgcgagacgtacaagctggag
gcgatggccaaagacaggggctacccacccttgtcgcgaacggtggaggttcagattgac
gttgtggaccgtgcgaataatccgcccgtatgggaccacgtagtgtatggcccgatctac
attaaagagaacatggccgtcggggctaaagttgtgtctattaaagccagctctggaatc
gacaataatccgacggtcttttaccacttaatgcccggttccacggcgcagacgaacaag
tttcatacattttaccttcagcaacgcgccgagcaatcgacaacttgggccgacattaag
gttaatcatccgttggactacgagagcataaaagaatacaatctcaccatacgagtggag
aataatggagctcagcagttggcttccgaggcaaccgtgtacatcatgctggaggatgtt
aacgacgagataccactgttcaccgaacgagaacaggaaaccgtactcgagggtgaacca
gtgggcagcaaagtcacccaggtgaacgccatcgacaaggatggaacattccccaataac
caggtcacatattacgtggtaaacagcgataggaacgagggcaaggatttcttcgagatc
aacagggaaaccggcgagatcttcacgaaaataatgttcgatcgcgagaagcagggtgct
tatgctttggaagtggaggccagagacggagcagcttccgcacgacctaacagcaatggc
caacctaactcagtaacaaaattcattcgcattgggatagccgacaagaacgataatccc
ccatattttgacaagggcctctacgaggctgaggtagatgaaaatgaagacattcagcat
acggtgctcaccgtcaccgccaaagatcacgacgagtcctcgcgtattcgatacgagatc
acgagcgggaacataggcggtgcattcgccgtgaaaaacatgaccggcgccatttacgtc
gcgggtgcgttggactatgagacgaggaagaggtatgagcttcggcttactgcctccgac
aacttgaaagagaattacacaacggttgtaattcacgtgaaagacgtaaacgacaacccg
cccgtcttcgagcggccaaattacagaacacaaattaccgaagaggacgacaggactttg
ccgaaacgcgttcttggggtcaccgcgaccgatggggacaaagatagaccgcaaaacatt
gtctacttcttaactgggcaaggtatcgatcctgacaatcctgcgaacagcaagtttgat
atcaaccgcacgagcggagagatctttgttttaaagccattggacagagatcaaccgaac
ggccggccgcagtggcggttcaccgtgtttgctcaggacgagggtggagagggtctcgtg
ggttacgccgacgtccaagttaacctcaaggacatcaatgacaacgccccgatattcccg
cagggtgtctacttcggcaacgttaccgagaatggcaccgcaggaatggtggtgatgacg
atgacagccgtggactacgatgatccaaacgaaggcacgaacgcaaggcttatctattcc
atcgagaagaatgtcatcgaggaggaaactggctcacctatttttgaaattgaatcggaa
actggcgtgatcaagaccgctgtatgctgcttagatcgagaacgcactccggattattct
atacaagttgtggcaatggatggaggggggttaaagggtaccgggacggcatcgatacgg
gtcaaagacataaacgacatgccaccgcaattcacgaaggacgagtggtttaccgaagtg
gatgagacggaaggaccagatctgccagagatgccgatactcactgtaaccgtgcacgac
gaggacgaaaccaataaattccaatacaaggtaatcgagaacagtggttatggtgccgac
aaatttactatggtacgaaataacgatggcacaggatcattgaaaattgtgcaatcgttg
gattacgaggaccaactgcagagtaatggctttaggtttaggatacaagtgaatgataag
ggcgaggacaatgataacgacaaataccatgtagcctattcctgggtagtcgtgaaattg
cgagatatcaatgacaatcagccacaattcgagaaagccaatattgagactaccgtgcca
gagaatgcccgtataggcagtagcctagaaacattcaaggccactgatccagatcaaggt
ggtaagagcaaggtttcctactccattgacagaagctccgatcgaaagagacagttcttc
atcaatgaaaatggcactgtatcgatacagaggagtcttgatcgcgaagaaactcctcgg
catcaggttaaaattttggcgatcgacgatggaataccacctaaaaccgcgacagctact
ctgacagttgttgtacaagacattaacgacaatccgccgagattcctcaaggactatcgt
ccagttttaccggaatacgcgcaaaccaaaaaggtcgtcgagattctcgctaccgatgac
gatgatcgatcgagaagcaacggccctccgtttactttccgcatggatcccaatgcaaac
gatgttatcagagctagcttcaaagttgagagcgataacaagggagcgaatggagatgga
atggctgtagtatcatctttgcgatcctttgatagagaacaacaaaaggagttcttaatt
cctattgtcatcaaagattccgggaatccttctatgtctgggaccagtaccttgacggtt
attataggggatgttaacgataataaaatgcaaccgggctccaaggaaatctttgtatat
aactatgcaggacaatcaccggatactgagataggtagagtatacgtgtacgatctagac
gattgggatctgccggacaaaaaattctactgggaaggattagagcacgcgcaatttaag
ctcgacgaagattcgggaatgattttcatgaaatccggcacacacgacggcaaatatcat
ctgagatttaaggtttacgatcggaagcatacgcaaacggatgtgcccgccaacgtgact
gtcactgttaaaagtattccgcatgaggcagtactaaattcaggctcggttcgaatagcc
gggataacagatgaggacttcattcgagtctggaattatcagaatcaaactctgtcacga
agcaaagcggatctatttagggacaaactgtcgcatctgttgaatatagacagagaaaac
gtggacgttttcagtgtgcaattaaggagagtacatccaccattaacagacgttagattc
gccgcacatggttccctgtactataaaccagtcaggcttaatggcattgtgcttatgcat
cgcgaagagatcgagaaagatgtgggtatcaacataactatggtcggcatcgacgaatgt
tattacgagaacgagatgtgcgaggggagctgtacaaacaccctcgacattagcaatttg
ccatacatggtgaatgcgaataggaccgcacttgttggcgtacgcgtggatgtaatagcc
gagtgtacctgcggagcgcggaatttcagcaagggtgaatcctgcagaaacagcccctgc
tataatggcggacgctgtgtggaagaccggtttggattatcgtgtcaatgtccatctggc
tataacggtccgaggtgtcaacagaccgccagaagttttcgaggcaatggttgggcatgg
tatcctgctttggaaatgtgcgataacagccacttgagcttcgaatttattacgagaaag
tctgatggattattattgtataatggtccgattgttcctcccgaagtcgatgaaataatg
gtttctgacttcatttcggtcgaattggaacgcggaataccgaggctactgatcgacttt
ggatccggcactttagaattaaaagtgaaaccaaagaaaaccttggacgacggcgagtgg
caccgacttgacattttctggaatacagagaccgtgaagctcatcatcgattattgcaaa
tccgcggaagtgtccgagctggaagacggaagtccgccagaattcaacgatactacctgc
caagccacaggcacgataccgccgttcaacgagtacctgaacgtgaacgcaccgctacag
atcggcggtctttacgtggagcaattcgacccgacgcactacaaatggaagcacatgcca
gtgggcaagggtttcgacggctgcattaagaatctctttcacaacagcaaactgtacgat
ctcgcacatccgggtctctcgcggaacagcgttgctggttgcccgcagacagaggagatc
tgcaacaatcaagaatcgaccttccgctgctgggaacacggcacttgcgtgggcagcttc
accgaggcgagatgccagtgcaatccaggctggactggtcccggatgcatgacaccgaca
atcccgaccacctttaagcctcagagctacgtcaaatacgcactgtccttcgaaccggac
aaatattccacccaggtgcaactcagattccgcacccgagagattcacggtgaactgttc
cgagtgagcgatcaacacaacagggaatacgccattttggagatcaaagacagcagactg
cacttcaggtataatctgaatagtcttaggacagaagagcgagatatttggctttcagca
atcgcagttgatgatggccaatggcatacggttagagtgtcgagatatggatccgctgca
actttggagttggacggtggcgaaggacgaagattcaatgaaactttttccttcgagggc
catcaatggctcctcgtcgataaacaagaaggtgtctacgcgggtggcaaggcggaatac
actggtgtccgtacatttgaagtatacgcggattatcagaagggttgtttggacgatata
agattagaaggaaaacatcttccactaccgccagccatgaacggaactcagtggggtcaa
gcaacgatggcgcgaaacctggaaagaaattgtccatcgaataaaccgtgcgccaatgtc
atttgtcaggatccatttgaatgtatcgatctctggaacgaatacgactgcacttgcgga
gagggaagaattccttcaccagataacaaaggatgcatggacaagaacgagtgcattgac
tatccctgcctaaacggtggcagatgcatcaatcaggacccgcgattccgataccgatgc
atttgtcctgacggtttctggggcgagaattgcgaactggtccaagaaggtcaaacgctc
aaattgagcatgggagcattagcggcgattctcgtctgtctgttaatcattcttgttctc
gtgttggtattcgttgtttataacagaagacgagaagcgcacataaagtatcccggtcca
gacgatgatgtgagagaaaatatcatcaattatgacgacgagggtggcggagaggacgac
atgaccgcattcgatatcacacctttgcagatcccaattggtggcccgataccggaaatg
agtggcaaactgcctccgtgtaaaatagcctatccacttggaccggagccgaatgtgggc
gtttttatcgaggatcataagaagagggctgatagtgatccaaacgcaccacccttcgac
gatttacggaattacgcctatgaaggtggcggaagcaccgcggggtctttagagtcatta
gcttccggtacggacgacgagcaacatgagtacgaatatttaggtgcctggggcccaaga
ttcgacaaactggccgacatgtacggtcccgcggaagagagcgaggaggaggaataa
DBGET
integrated database retrieval system
