Pogonomyrmex barbatus (red harvester ant): 105424727
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Entry
105424727 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbar03016
]
105424727
Enzymes [BR:
pbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
105424727
Transfer RNA biogenesis [BR:
pbar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105424727
Prokaryotic type
105424727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
105424727
NCBI-ProteinID:
XP_011633417
UniProt:
A0A6I9VW71
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MLYRTRHCISSNFSFHWIKNQLENICHRTTSVAMHPTADSDINTDVNMHNKRPIDDDSEN
KAKVQKTESEMVQKVKRKNHAMLLGYVGKDYYGMQRNPGMKTIEEDLITALLKADLITMK
HFDNIRAINFQRAARTDKGVSAVRQIVSLKLPEKADKTVINEFLPEVIRVFGIKRVTKGF
NSKNQCDARTYRYIIPSFAFAPEDQTLLKLGKEVNEDERIKQLSIIDGKPYTDYRLSSES
LDKLNSILKLLEGSHNFHNFTSKVRPLDPRARRYIISFQCSETFVSNDIEFIVLEVKGQS
FMLHQIRKMIAMVIAIVRNMISEETIEEAFKTMDKMDIPLAPSLGLCLCHVHYDHYSKRY
GTDGLHETLDWKECEEEIEKFQKTYILRHIVDTEISEQTTLKWLAGLPFYSFSNKDVLPV
DDDEKQETMHDDIQM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacaggacaagacactgtatttcaagcaatttttcatttcattggataaagaat
caattagagaacatttgtcacagaactacatcagttgcaatgcaccctacagccgattct
gatataaatactgatgtaaatatgcataataagagacctatagatgatgacagcgagaat
aaagctaaggtacaaaagacggaatcagaaatggtacaaaaagtaaagagaaaaaatcac
gctatgttgctaggctatgttggcaaagattattatggtatgcaaagaaatcctggtatg
aaaactattgaggaagatttgattacagccttattgaaggcagatttaataactatgaaa
catttcgacaacattcgtgccatcaattttcaaagagctgctcgtacagataaaggagta
tctgcggttaggcaaattgtttcgctgaagctaccagagaaggctgataaaacagtaata
aatgaattcttacctgaagtgatcagagtatttgggataaaacgagtgacaaaaggtttt
aacagtaaaaatcagtgtgatgcacgtacctacagatatattattccttcttttgcattt
gcgccagaagaccagactttgttaaaacttggaaaagaagttaatgaagatgagagaatc
aaacaattatcaattattgatggaaaaccatatactgattatagattatcttcggaatct
ttagataaattaaattcaattttgaagcttttagaaggttctcacaattttcataacttt
acatcaaaagtgagaccgttggatccacgcgcacgacgctatataattagctttcaatgt
tcagaaacgttcgtttcaaacgatatagaatttatagtattggaagttaaaggacaaagt
tttatgctgcatcaaatccgaaaaatgatagcaatggtaattgcaattgtgagaaatatg
atatccgaagagacaattgaagaagcatttaaaacaatggataaaatggacataccactt
gcacccagtttaggattgtgtctgtgtcatgtacattatgatcattatagtaaaagatat
ggcacagacggtcttcatgaaaccttagattggaaagaatgcgaagaagaaatagaaaaa
tttcaaaaaacatatatcctgcgacatatagtggacaccgagatttcagaacagacaaca
ttaaaatggttagcgggccttcctttttattcatttagcaacaaagatgttcttcctgtg
gatgatgatgaaaaacaagaaactatgcatgacgacattcagatgtaa
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