Pogonomyrmex barbatus (red harvester ant): 105424782
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Entry
105424782 CDS
T04903
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105424782
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
Other 90S particles
105424782
Pre-60S particles
Other pre-60S particles
105424782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
DUF7623
Motif
Other DBs
NCBI-GeneID:
105424782
NCBI-ProteinID:
XP_011633501
UniProt:
A0A6I9VYJ4
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MGKLAPRLGSRKKAKRWAKGQSSSSNPMTTKHREQATGMFFKDFSSTPGGITKEDLQRHD
AIQGIEPHFAKLDIDEDQLKSTIDGTVNTYETFATNYSNCSNISFGRFLSHFQSNSIVHK
EMLAVLAAVTEIIKQNGGNESSTEYFAALMSTLEAVEEDTSVAATLSLLGMCLRTVPRNV
LILQFGATSQTLFRLLLKYIISENHLILRHCLGCLSLLFQAQEDAVWENPSTMQVLNAIL
SCITHAKPKVRKSAQRGICVILKSSDTMKSEKPSTHHPAAGQVAMHCIAQFDAACKPGSS
LGVTTILHILTLLKDIMSQLPKSHVKTICERILSIMTLKNAVITSCCLQTLHGLFVTKPS
ETTLPFQINANIIKALYDYQPSANDTQPTLAWLTVMQEAHCNLVCLAGQASRQSSSAFDV
FSTLDCVLPEMFNRCIELWLSDKTEVVAGVSHTIKTILQECVGSLCENEERAIGKYESTL
RRIIEIMHKTLSYQYLRAWRHVLHLTAILFQVIGKLKLQELAGIVKTLGNLRDFHDFAYN
CEAEYAIGAAIRAMGPQTVLSILPLQTDDGKMINLRRSWMIPLLKDCITGGTIAFFKDTL
LPIARRCEEMTKGSFVDSKTYECLITQLWSVLPSICNNASDVKDNFKHLAKLLGMAISDR
KDLRLSAMAALRKLITKARQNNNTDDIVELARFAKNYLPILFNLYTIKPSGTDEEGVRLA
AFDTIKIYLMITNIDLANELFDRALSKLAEPNVTDFFKESAYDLTRALIGYTDIDRLTKY
YDDACVPFLKDDAKQKEQKKAYRFLEEICNNKTEICEQFLLEHRRQIQKTLISSATSVIK
TSRGARLRCLVHLVRIHPQLEGTKFLEAIVPEAVLCVKDINERCRDAAYQLLNVIAERFL
DNPERLKDYADMLMIGLGGEQAYVSASLLALASITYHHNDSLGTEIVGEILEHACTILTS
PTREIVESALSYVKVYITVTPSAMIAPALPRIVDALSRMSEDCKRHFRQKVRDIFTKLIR
KYGIGLISSMIPASDTILHKRLKNINKVMDMKRKRRELERAKRLEMSSDEDFDAKRKPKS
IEEILADSDEEFQVTENEEAKRNKRKPSRKDLAWIQESEDNIVDLADPVAAKNITTTQPG
VSNPKIPEKKVKDYGFKTTPDGRLIIRDDNDKDSDAGEGNKKKRKASFLRSDSEDDYEDQ
DDVSVVTAKSIGNKRKRNENMSDMMSLKSQSTSKYRVGGSGIHRLLKARKVDYEPGSEYR
ATKARGDIKRKGRPDPYAYVPLTRSMLNKRKRKKNAGKFQSIVSGTRKGARIGMRNKRKK
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctagcacctcgtttgggaagtagaaagaaggcgaagcgatgggcaaagggt
caaagttccagttccaatccgatgacaaccaagcatcgtgagcaagccactggcatgttt
tttaaggatttttcaagcacgccaggtggtattacaaaggaggacttacagagacacgat
gccatccaaggtatcgaaccgcatttcgccaaactcgacatagatgaggatcagcttaag
agcaccatagacgggacggtgaatacatacgagacgtttgctaccaattatagcaattgc
tctaatatttcttttggcagattcctcagtcactttcaatcgaattcgatcgtacataaa
gagatgttggcagtgctggcggctgtcacagagatcatcaagcagaacggtggcaatgaa
agctcgactgaatattttgctgcattaatgagtactttggaggcggtggaagaagataca
tccgtggctgctacgctgtctctgttaggaatgtgtctgagaacggtacccagaaacgta
ttgattttacaatttggagcgacaagtcagactctctttcggcttctattaaaatacatc
atcagtgagaaccatttgattttgcggcattgtctaggctgtctctcactgttatttcaa
gcgcaagaggatgccgtttgggagaatccttcgacgatgcaggtactgaatgctatatta
tcatgtatcactcacgccaagcctaaggtacgcaaatctgcccaacgtgggatatgtgtc
attctcaagagcagcgacacgatgaagagcgagaaaccgtcaactcatcatccggctgcg
ggacaagttgcgatgcattgcatcgcccaattcgacgccgcttgtaaaccaggatcatct
ctaggggtaaccactattttgcatattcttacattgctgaaagacataatgtcacaattg
ccaaagtcgcatgtaaagactatctgcgaacgtatactgagtatcatgacgttaaagaac
gccgtgataacatcgtgctgtctgcaaacgctgcatggattatttgttacgaagccatca
gagacaacattgcctttccaaataaacgcgaatatcattaaggcactttatgattatcaa
ccctctgcaaacgatacacagccaacgttggcatggttgacggtcatgcaggaggctcac
tgcaacctggtatgcctagcaggccaagcgtcgagacagtcgagctcggctttcgacgtc
ttttcgacattggactgtgtgttaccagaaatgttcaacaggtgcatcgagctctggctt
tccgacaaaacggaagtcgtcgctggagtatcgcacaccattaaaaccattcttcaggaa
tgcgtgggttctctttgcgagaacgaggagcgagcgatcggcaagtacgagtcgaccttg
aggcgtatcattgagataatgcacaagacattgagttatcagtaccttagagcttggcgc
cacgttcttcatctaacggctatcctcttccaagtgattggcaagctcaaactccaggaa
ctcgcaggcatcgtcaagactctgggaaatttgcgagatttccacgactttgcatacaac
tgtgaggcggagtacgcgattggagcagcgattagagctatggggccgcaaaccgtcttg
agcattctcccccttcaaaccgacgatggaaaaatgataaatctcagacggagttggatg
ataccgctgctaaaggactgtataacgggcggcactattgccttctttaaggatacttta
ctgccaatcgctcggcgatgcgaggagatgaccaagggctctttcgtagacagcaagacg
tacgaatgtttgataacacaactctggtccgtcttaccgagcatatgtaacaatgctagt
gatgtgaaggataatttcaagcatcttgccaagttgttgggtatggctattagcgaccga
aaagatctgaggctatcggcgatggcagctctgcgaaaactgatcaccaaggcaaggcag
aataacaacaccgacgacatcgttgaactcgctcgcttcgctaagaattatctgccgatt
ctgttcaatctgtatacaatcaagccgagcggcacggatgaggagggagtgcgacttgcc
gcattcgacacgatcaagatttacctgatgatcacgaatatcgatttggcgaacgagctg
tttgatcgagcgctgagcaagctcgcggagccgaacgtgacggacttcttcaaggaaagc
gcctatgatctgacgagagcgctgatcggctatacggacatcgatagattgaccaaatac
tatgatgatgcgtgcgtgccatttcttaaagacgatgctaagcaaaaggagcaaaagaaa
gcttatcgctttctcgaggagatatgtaataacaagacggagatttgcgagcaattcttg
ctcgagcatcgacgccagattcaaaagacgttgatttcatcagcgactagcgtgattaaa
acgagtagaggagcgcgtctgcgatgtttggtgcatctcgtccgaatacatccgcagctc
gaggggaccaagttcttggaagccatagtgccagaagctgtgctctgcgtcaaagacatc
aacgagagatgtcgtgacgcggcgtatcaattactcaacgtgatcgccgagaggtttcta
gataatccggagcgtctcaaggattacgccgacatgctaatgattggcttaggcggtgag
caagcatacgttagcgccagccttctcgctctggcgtccatcacttatcatcacaatgac
tctctgggcactgaaattgtcggagagatcttggaacatgcctgcaccattctgacgagt
cccacgagagagatagttgagtccgccttgtcctatgttaaggtgtatatcacggtgaca
ccgtccgccatgatagcaccggcattgccaaggatagtcgatgctctatcgcggatgagc
gaagattgtaagcgtcactttcgtcaaaaggtgcgagacatcttcaccaaattgatcagg
aagtatggcataggattgatatcgagtatgataccggcctcggacacgattctgcacaag
agactgaagaacattaataaggtgatggacatgaaaagaaagagacgggagctcgagcga
gccaagagactggagatgagcagcgacgaggattttgatgccaagaggaaacccaaaagc
atagaagaaatattggccgacagcgatgaggaatttcaagttacggagaacgaagaagca
aagaggaataagaggaaaccttcaaggaaggacttggcttggattcaagagagtgaagat
aatatagtcgatcttgcagatcccgtagctgctaaaaatattacaacaacgcaaccgggt
gtatcaaatccaaagattccagaaaagaaagtgaaggattatggcttcaagactacacct
gatggtcgtctcattattagggacgataatgataaggacagcgatgcgggagaagggaat
aagaagaagagaaaagcttctttcctccggagtgattcagaagacgattacgaagaccaa
gatgacgtatcagtagtaacggcaaaaagtattggcaataaacgtaaacgcaacgagaat
atgtcagacatgatgagcttaaagagtcagtccacgtcgaaatatcgagttggcggatca
ggtattcatcgattgttaaaagcgaggaaagtagactacgaacctggttcggaatatcgc
gcgacaaaggcacgaggagatattaagaggaagggtagaccagatccctatgcatacgta
cctttaacaagatccatgttgaataaaagaaagaggaagaaaaatgcaggtaaattccag
agtatagtctccggaacgagaaaaggcgctcgtataggtatgcggaataaacgaaaaaaa
ggttaa
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