Pogonomyrmex barbatus (red harvester ant): 105424875
Help
Entry
105424875 CDS
T04903
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105424875
09122 Translation
03013 Nucleocytoplasmic transport
105424875
03015 mRNA surveillance pathway
105424875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105424875
03041 Spliceosome [BR:
pbar03041
]
105424875
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105424875
Spliceosome [BR:
pbar03041
]
Common components
Common spliceosomal components
Cap binding complex
105424875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
105424875
NCBI-ProteinID:
XP_011633656
UniProt:
A0A6I9VYX3
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRVHEEDDGYDRVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGLFRSKILRILTDCAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKA
CKWDVARYSLRFLADLVNCHVLSCGSLMQLFDNMLDAANEDGVPQVRRDWYVYAVLSTLP
WVGRELYEKKEQELDHLMVTIEIFLNKRNKKHQPALRVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPPLMPPPHHESYSYPLPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIINNYYFERKDCAAQLLNFPFKAKIPLDYCIVEVIFG
ELFRLPTPKHLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAATAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDSEHPRPKFIREVLLKALRLSYYQRIRDMMPDSYVDLI
PAVPEPVYKYSSEGASSLPGTAAAHELVVSIRRKCTPEEVLNVLNTLPGPRENEETNNYN
PLKIDVFVQTLLNLGSKSFSHSFAAIVKFHYVFKVLAETEEAQICILRNMYALWKNHYQM
MVVLTDKFLKTGIIECSAIANWIFSKEMASEFTKLYIWEILHLTIRKMNKHVTKLSTELT
EAREKLRRAESRSGSSSDEEDNNKERNRERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGIDYNTHWYKWTVGRLQQVFLSHQEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtagaagagtacatgaagaggatgatggctatgatcgagtatataagaaacgt
aggagggtatcagaaaatcaagagattgaagatcgccttgaatctctcattcttcgcgtc
ggagaaaaatcaacttcatctctggaaagtaatttggaaggtttggcttctgtattagaa
gctgacctgggtctattccgcagcaaaatacttcgaattttaactgattgtgctattaaa
atgccagagaaatgtactatttatactactcttgttggattattaaatgcaaaaaatttc
aattttggaggagaatttgttgattatatggtgaaaaatttcaaagattccttaaaagca
tgcaaatgggatgtggctaggtattctcttagattcctagctgatttggtaaattgtcat
gttttatcatgtggatcattaatgcaattatttgacaatatgctggatgctgcaaatgaa
gatggtgtgccgcaagtaagacgtgactggtatgtttatgctgtcttatcaacattacca
tgggtcgggagagaattatatgagaaaaaggaacaagaattggatcatttaatggttaca
atagagatatttttgaataaacgaaacaagaaacaccaaccagcattgagagtatggtca
agtgacacgccacatccacaagaagaatatttagattgtttgtgggcacaagttcgaaaa
ttaagacaagataattgggccgagaaacatattccacgaccatatcttgcatttgattca
atattgtgtgaagcattacaacataatctaccccctttgatgccgcctccacatcatgaa
tcttattcttatccattacccactgttgtctttcgtatgtttgattatacagattgtcct
gctgaaggaccattattaccaggaagtcatgctatcgagagatttttaatagaagagcat
ttacggcaaatcattaataattattatttcgagaggaaagattgtgctgcacaactgtta
aacttcccattcaaagccaaaattcctttagactattgtattgttgaagtaatattcggc
gaattgtttagactgcccactccaaaacatttagagatttgttacggatcaattttaata
gaactttgcaaattgcagccttcaactatgccacaggtactagcgcaagcaacagaaatc
ctatttcgtcgtatagatagtatggcagctaccgctttcgatcgttttgtttggtggttt
gcatatcatttgagtaactttcaatttcgttggtcatgggaagattgggattcttgtttg
caacgcgattcagaacatccaagaccaaaatttatacgggaggttctgttgaaggcattg
agattatcatattatcaaagaattcgagatatgatgccagactcgtatgtagatttgatt
ccagcagttcctgagcctgtatataaatattcatctgaaggcgctagttcactccctggt
acagctgcagctcatgaattggtagtttctataagacgtaaatgcacaccagaagaagta
ttaaatgtattaaatacactgcctggtcctagagaaaacgaagagacgaataattacaat
ccgttaaagattgacgtctttgtacaaactttattgaatcttggttcgaaaagtttcagt
cacagttttgcggctatagtaaaatttcattacgttttcaaggtactcgctgagactgaa
gaagcacaaatatgtattttaagaaacatgtacgcgttatggaagaatcattatcaaatg
atggtggtattaacggacaagtttttgaaaactggtataattgaatgtagtgctatcgcc
aactggatattttccaaagagatggcatcggaatttacaaaattatacatttgggaaata
ctgcatttgacgatacgtaaaatgaacaagcacgtaacaaaattaagcacagaattaaca
gaggcgagagaaaaactgaggagagcagaaagtagatcaggctcttcttcagacgaggag
gataataataaagagagaaacagggagaggccatcggaggatgtggtagaacgaatggag
gaaaagctggaagctgcgcaagcagatcagaaaaatttatttctcattatatttcagcgt
tttataatgatcctatcggagcatttagtacgctgcgacacagacggaattgactataac
acacattggtataaatggactgtaggaagattgcaacaagttttcttatctcatcaagaa
caagtacaaaaatattcgtcgacactggagaccttgctttttactccggacttggatcct
catattttagacgtattccatcaatttgtttctctacgagcataa
DBGET
integrated database retrieval system
