Pogonomyrmex barbatus (red harvester ant): 105425085
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Entry
105425085 CDS
T04903
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105425085
03041 Spliceosome [BR:
pbar03041
]
105425085
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105425085
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105425085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF4523
RRM_Nup35
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
105425085
NCBI-ProteinID:
XP_011633944
UniProt:
A0A6I9VXK8
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAVAPGKNKLKMGSAGRYYGAYLIYDMANSCLAALHAKMPPPVVVTRTNPPSPLHIQNPQ
HYHIFVGDLSPEIETHTLREAFSAFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAI
GNMNGQWLGGRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLT
EELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSWGKE
SGDPNNAQQTGQALSSATYPYYAAAAAAAAAAAGVAGVGGVGGVGGAGQLGYWYPPQSYP
TTATQMQAGGFLQGMQGYTYGQFAGYQQAQYMGMGMGAVHAAGTAAGWGQGLPGGPQLPP
HHATTVTAPPGVQAAPPPPPPPAQMMAYPMQQFQLADEDWLTPSLLV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcccggtaagaataaattgaaaatgggcagtgcgggccgatactacggt
gcttatctcatctacgacatggcaaactcatgcctcgccgccttgcacgccaagatgcct
cctccggtcgtcgtcacgcgaaccaaccctccgtctcctctgcacatccagaaccctcaa
cattatcacatatttgttggagacctgagcccggagatcgagacacataccttaagggaa
gcgttctcagctttcggggagatctcggattgcagagtcgtcagagatcctcaaacctta
aaatccaaaggatatggatttgtttcgtttgtcaaaaaagcggaagcagagagcgccatc
ggcaacatgaatggccaatggctcggtggcagaagtattcggacaaattgggccactcgt
aaacctcctgcacctaaatcggaagccaatgcaaagccattgacgtttgatgaagtttac
aatcaaagcagtccgaccaactgcacggtatactgcggtggattgaccaacggtttgaca
gaggaacttatgcagaaaactttctcgcctttcggatccatacaagaaattcgagtgttt
aaagataaaggctacgctttcatcaggttttctaccaaggagtcggcaacgcatgccatc
gtagcggtacataatacagacatcaacggccaaacggtaaagtgcagttggggcaaggag
agtggagatcctaataatgctcagcaaactggacaggcattatcgtcggcgacgtaccca
tactacgcggcggcggcagctgccgccgcggcggcggcgggtgtcgcgggtgtcggaggc
gtcggtggcgtcggcggtgctggacaactgggatactggtatccaccccaatcttatcct
accacagcgacacaaatgcaagctggtggctttcttcaaggcatgcaaggatacacctat
ggacagttcgccggatatcaacaggcgcaatatatgggaatgggcatgggtgctgtccat
gctgctggcacagcagcaggatggggtcagggattacctgggggaccacagttaccacca
caccacgccacgacggtcacggcacccccaggggtgcaagccgcacccccgccaccaccg
ccaccggcacaaatgatggcctacccaatgcaacagttccagctagcggatgaggactgg
ctgacgcctagccttctagtgtga
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