Pogonomyrmex barbatus (red harvester ant): 105425157
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Entry
105425157 CDS
T04903
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03082
ATP-dependent chromatin remodeling
pbar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105425157
03083 Polycomb repressive complex
105425157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105425157
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105425157
Histone modification proteins
HAT complexes
HATB complex
105425157
HDAC complexes
Sin3A-HDAC complex
105425157
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105425157
PRC2.2
105425157
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105425157
Heterochromatin formation proteins
Other heterochromatin formation proteins
105425157
Chromatin remodeling factors
NuRD complex
105425157
NuRF complex
105425157
NuRF complex (fruit fly)
105425157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105425157
NCBI-ProteinID:
XP_011634081
UniProt:
A0A6I9WQJ1
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MMADKDGEGFDDAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPG
SEIETGGS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagacaaggatggcgagggttttgatgatgctgtagaggaacgtattatcaat
gaagaatataaaatatggaagaaaaacacaccatttctatatgatttggtgatgacacat
gctttggagtggccttccttaacagctcaatggctacctgatgtcaccagacctgaagga
aaagactattcaattcataggttaatcttgggcactcacacttcagacgaacaaaatcat
ctgcttatcgctagcgtccaattgcctaatgaagacgcccaattcgacgcatctcattac
gacaatgagaaaggcgaattcggtggatttggctctgtgagtggaaaaatcgagattgag
attaagattaatcatgagggtgaagtcaacagagcgcgatttatgccgcaaaatccatgt
gtgattgcgaccaagactccctctagtgatgtgcttgtattcgattataccaagcatcct
agtaaaccggatccaaatggagaatgtcatccagatttgagattgcgaggacatcagaag
gaaggctatggtctctcatggaatccaaatctcaatggatatttacttagtgcttctgat
gatcacacaatttgtctatgggacatcaatgctacaccgaaggagaatcgtgttatcgat
gcgaaaactatctttactggacatacagctgtggtagaagatgtcgcttggcacttgcta
catgagtcattatttggttcagtcgctgacgaccaaaaacttatgatttgggatactaga
tgtaacaatactagtaaaccaagtcatactgttgatgctcatactgctgaggtaaactgc
ctgagctttaatccatactctgaattcatattggccaccggcagtgcggacaagactgta
gcactttgggatttgcgaaatcttaaactaaaattacattcatttgaatcacataaggat
gaaatcttccaagttcaatggtcaccacataacgagacgatattggcaagcagtggtaca
gatagacggttacacgtatgggatcttagtaagatcggcgaggaacaatccagcgaagat
gctgaagatggcccacctgagcttctgtttatacatggaggtcatacggcgaaaatcagc
gatttttcgtggaacccgaatgaaccatgggtcatatgctcggtatcggaagacaatata
atgcaagtatggcagatggcagaaaatatctacaatgacgaggaacccgagacacctggg
agtgaaattgaaactggtggctcataa
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