Pogonomyrmex barbatus (red harvester ant): 105425159
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Entry
105425159 CDS
T04903
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105425159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105425159
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105425159
mRNA cycle factors
Common to processing body (P body) and stress granule
105425159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
Motif
Other DBs
NCBI-GeneID:
105425159
NCBI-ProteinID:
XP_011634084
UniProt:
A0A6I9WQJ4
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWVCQQQLQKIYQQVLILDLEYALDKKVE
QELWSLGFKNYIVTLQSQAKDRKNPKRGESQALLSWCLEAASGFYLTLLQEICTVFDLDL
PFRRKGYIYGRTSPWKAVEKLSPPHKSSCFYACQYCLVHLGDIARYRNESKQAEMFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYARSVAVKHPFPVATANLATTLSSALNDKS
FNIDGKTKLNSQEYIAVFLKLHGIIHILGDLKLACSYSKQLTETLTALVATESFSSWMLI
QMLVINLYALQHTAAIGTDSTEVHKNEQMINDKKLARDCILDLIAGTLSALLLPVYTIKN
SIIEYFALPSIKLCLDWINIKPTVLEEMAFTSRLQIWPSLCVLLNALQSCVMDFKYDEYA
AIPLPEDRDLQGFLPLEKSFENLRFTNTTLEGDMVTLNKIRAVRILHLGHCFAQYRINGL
IPISITTEEKTGDNKFTSMSNGAGPSNELMKELEELSLNKEKQLDISMSPVLSEAASSKS
SGETDIEISADKKIFQGILKPQGSLERNRDRDSLVSTAETNSSEASSLPCARKPRQNIAM
QAIMRRAETEQKQVTFKNISPVIVEENDRKVKTMTVPPVTSVTNKPTLISEMPKANEAAN
TNNTLVNIQNRLSTISLAPSTIQNQSTSIQSQQRSPKLPPSIPMPAQVSQLATKEQQTQQ
IAQQMIHGGMTAQASTLGPVCYPNQSFSVQNPQFAKNFITNRSPIANAPRYQMQGQLNNN
GQPVPAMPQNINGMHAINQSRPLHQRMSQNVSHSPAQLLQQNMRLGSPAQQNMMPQSISL
QTNNMGLQPNISVEQQNHSMGLQQQNMMQSNPRPNDIHNQLNMMSALSVYEKDPQQQTLT
TLANSQSPTSTSNFQLSFNQSHFNQSQSFGQPLSQSQPSPSFYKKNSDAMDFPFSNQINV
STKNQIQQQQSAANSYMFCNYEPTEHFNLWKDNRPPQPPIAWWGSTNNTTQMHIKDSTVN
DNTFSNWSDSSTLGNTVSRMPLTPGKNYQRQQQNGQHLMAGNSFEDSGLFELEQKPSQAV
STGNTYSLFSSNTWNTSVNTSINSGSTTQDQMKARLHQQSLWSGPGPSPLERLLEQQKSL
REGGTT
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaggcggccgttcaggctttgaagaaagcagaaccattgaaggacaaggtt
caacgttgcaaggatcttcttaatgacaacgatgcctgggtatgtcaacagcaattgcag
aagatataccagcaggttctcatattggatctggaatatgccttggacaagaaagttgag
caagaattgtggagtcttggatttaagaattatatagtgactctgcaatcgcaggctaag
gacaggaaaaatcccaaacgtggcgaatcccaggcgttgctcagttggtgcctagaagca
gccagtggtttctatttgactttgctgcaagaaatctgcactgtatttgatttagatcta
ccatttagaaggaaaggttatatatatggacgtacatctccatggaaggctgttgagaaa
ttatctcctcctcacaaatcttcttgtttttatgcctgccaatattgccttgtacatctg
ggtgacattgcacggtacagaaatgaaagcaaacaagccgagatgttttatagacatgct
gtctcactatcaccatccagtggacagccatataatcaattggcactcttagaagcttcc
cgcggtgataaattgggcacggtgtttcattacgcacgttcggtagctgtgaaacatcct
tttcctgtcgctacagcaaatctcgccacgactctatcctccgccttgaatgacaaatct
ttcaatatcgatggcaagaccaaattaaattctcaggaatacatcgctgtattcctgaaa
ctgcatggaataattcacatactcggcgatttgaagctagcatgctcgtacagcaaacaa
ttgacggaaacattgactgcattggtagccactgaaagttttagttcgtggatgctcata
caaatgctggtgatcaatttgtatgctctgcaacacacagctgcgattggcactgacagc
acggaagtgcacaagaacgagcaaatgatcaatgataaaaaactcgctcgcgactgtata
ctggacttaatcgcaggcactctatctgccttgctgctacctgtctatacaataaagaac
tctatcattgagtactttgcgttgccttctataaaactgtgccttgattggatcaacata
aaacccacggttttagaagaaatggcttttacatcaagattacagatctggcccagtctt
tgcgtactgttgaatgccttacagagttgtgtgatggattttaagtatgatgaatatgct
gcgataccattgccagaagatcgcgatctccaaggttttttaccgttggagaagagtttc
gaaaatctcagattcacgaatacaacattggaaggcgacatggtgacactaaacaagata
cgagcagttcgtattttacatctgggccactgctttgctcaatatcgaattaatggattg
ataccaatttcgattacgacggaggagaaaacaggcgataacaaatttacatctatgagc
aacggtgctggacccagcaacgagttgatgaaggaactcgaggaacttagtttaaataag
gagaagcaacttgatatctcgatgagcccggtgctgtcagaagcagctagtagcaaaagt
tctggggaaaccgatattgagatttctgcagataaaaaaattttccaaggtattcttaaa
ccgcaaggctccttagaacgaaaccgagaccgagactccttagtaagtactgcagagaca
aacagtagcgaggcaagttcccttccatgcgcgcgaaaaccgcgacagaatatagcgatg
caagcaatcatgcgtcgtgcagagaccgaacagaagcaggtgacattcaagaatatatca
cccgtaattgttgaagaaaatgatagaaaagtgaaaacaatgaccgtcccacctgttact
tctgttacaaataaaccaacattaatttcagagatgcccaaagctaatgaagctgccaat
acaaataatactctcgttaacattcagaaccgtttatcgacaatatcactcgctccgtct
actattcagaaccaatctacatctattcagagtcaacagagatctcctaaattgccgccc
agcattcccatgcccgctcaagtgagtcaattggcaaccaaagaacagcaaactcaacaa
attgctcagcaaatgatccacggtggcatgacggcacaagcctcaacattgggaccggtt
tgctatccaaatcaatcattcagtgtgcaaaacccgcaattcgctaagaacttcataaca
aatcgatcaccaatagcaaacgcaccgcgttatcaaatgcaaggacaacttaataataat
ggacaaccggtaccagcgatgccacagaacattaatggaatgcacgcaattaatcagagc
agaccattgcatcaaaggatgtcacagaacgtatctcacagccccgcacagttgctacag
caaaacatgagattgggatcacctgctcagcaaaatatgatgccgcaaagtataagttta
caaacgaataatatgggattgcaaccaaatatcagcgtagagcaacagaatcattcgatg
gggctgcaacagcaaaatatgatgcaaagcaatcctaggccaaacgacatacacaatcaa
ttaaatatgatgtcagcgttatcggtatacgaaaaggatcctcagcaacaaactttgacg
acgctagcaaactcacagagtccaaccagcacatcaaatttccaattgagctttaatcag
agtcatttcaatcagagtcaatccttcggacaaccgttatcgcaaagtcaaccgtcgcca
tcgttctacaaaaagaattctgatgcaatggacttcccattttcgaatcagatcaatgta
tctactaaaaatcaaatacagcaacagcaatctgcggcaaacagttatatgttttgcaat
tacgaaccaactgaacatttcaacttgtggaaggataatcgaccacctcaaccaccgatt
gcctggtggggttcaactaataatacaactcagatgcatataaaggattcaactgttaat
gataacacattctcaaactggagcgattcatctactcttgggaatacagtgagtagaatg
ccgctgacgccaggcaagaattatcagcgacaacagcaaaatggacaacatcttatggca
ggaaacagcttcgaggattctggattgtttgagctcgagcaaaaaccatcccaagcagta
agcaccggcaatacttattccttgttcagcagcaatacatggaatacatcggttaataca
tcaatcaattctggttcgactactcaagatcaaatgaaagcacgacttcatcaacaatct
ctatggtccggaccaggtccttcccctttagaacgacttttggagcaacaaaagtcacta
cgtgagggaggtaccacttga
DBGET
integrated database retrieval system
