Pogonomyrmex barbatus (red harvester ant): 105425206
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Entry
105425206 CDS
T04903
Name
(RefSeq) general transcription factor IIE subunit 1 isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105425206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105425206
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
105425206
Prokaryotic type
Archaeal type
TFE
105425206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
105425206
NCBI-ProteinID:
XP_011634170
UniProt:
A0A6I9WQQ6
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MNAEERLVTEVPSSLKQLARLVVRGFYTIEDALIVDMLVRNPCMKEDDICELLKFERKML
RARISTLRNDKFIQVRLKMETGSDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEER
DATSRASFKCPSCLKTFTDLEADQLFDMRTGEFRCTYCREIVEEDQSALPKKDSRLLLAK
FNEQLEPLYILLREVEGIKLAPEILEPEPVDINTIRGIDSRKPSSLRAPSEQWSGEATRM
SGFMVEDTRVDVTIGDESPDDNAANHRKERPIWMMESTVINADGSQPDGVNAQDSILDKA
AATATNTTTTNNKQGEDIMSVLLAHEKKGSTNSATSIKAALPQESSDSSDNEEDAEMQAI
DTGEVEAMDSEDDELVPTVSVGGKTVAITDVNDTLIAEMTPIEKEAYIQTYQEYYSHMYD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgaggaaagacttgtcactgaggtaccgagtagcttgaagcaactggcacgt
cttgtcgtacgtggattttacacgatagaggatgctttaattgtggacatgttggtcagg
aatccatgtatgaaagaagatgacatttgtgaactactcaaatttgaacgcaaaatgttg
agagctaggatatctacattgcggaatgataagtttatccaagtgagattgaagatggaa
acaggatcagatggcaaagcacagaaagtcaactattattttatcaattataaaacgttc
gttaatgtagtgaaatataaacttgatttaatgaggaagagaatggaaactgaagaaaga
gatgcaactagtagggctagttttaagtgtccaagttgtttaaagacatttactgatctt
gaagcagatcaactttttgacatgagaaccggcgaatttagatgtacatattgtcgggag
atagtggaagaagatcaatcagctcttccaaagaaggattccagattattattagcaaag
ttcaatgaacaattagagccgctctatatattattgagggaagtggaaggaatcaaattg
gcacctgaaatattggaaccagagcctgttgatattaacacaattcgaggcattgactca
agaaaaccaagtagtctcagagcacctagcgaacaatggtcgggtgaggctactagaatg
tcaggctttatggtagaggataccagagtggacgttactattggagacgagtctcctgat
gacaatgcggcgaatcatagaaaggagagacccatatggatgatggaaagcacagttatc
aatgccgatggttcacagcctgatggtgtgaatgcacaagacagtatcttagataaggcc
gcagccactgccacaaatacaactacgacgaataataaacagggtgaagacattatgtca
gtgttgttggctcatgagaagaagggcagcaccaattctgcgacatctatcaaagcagcg
cttccacaggaatccagtgatagtagcgataacgaagaagatgcggaaatgcaggcgatt
gataccggtgaggtggaggcaatggactccgaagatgatgaacttgtaccaactgtcagt
gtcggtggtaaaaccgtcgcgatcaccgatgttaatgacactctgattgcggaaatgaca
cccatagagaaggaagcttatatccaaacgtatcaggaatattactcgcatatgtacgac
tag
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integrated database retrieval system
