Pogonomyrmex barbatus (red harvester ant): 105425246
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Entry
105425246 CDS
T04903
Name
(RefSeq) retinoblastoma-like protein 2 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105425246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105425246
Transcription factors [BR:
pbar03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105425246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
105425246
NCBI-ProteinID:
XP_011634235
UniProt:
A0A6I9VYA0
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MGQSDDIEDSMYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCAVYVA
CRKFSIPTVGRPGTNVEGNCVSLTRLLQLCNLPLIQFFSKSKSWADMTNMSQDFRARIDK
LEANFSVSMLIFKKYQPIFTFIFKDPREDTSRPSRSRRHKAVPCTSTRVFEFCWTLFICI
KGAIHDISDDLVSSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPANFNDENYTPPQTA
NCIVNLLCEHHDAIAVEAKAIKEYYMKNYINKLFNDRILRGDQSNFSAILEALNFDNNSK
AINKTYEQRMLSVGDFDERIFLAKWRRVSLIDVSNSNIFGQNSAKHVQFANHEVLQGHDA
NENIGSPTQMINIDDFNERLQIKREQYAGQIQYLAPPTPLTGRKYLRSKDVSNITPVTTA
TQSVIKLQALIAGQSAPSESLLQMLNNCSQDVKSSLEAKVKQIGELFCANYNNNANNINI
NDDATSDFGKKRLLMGQTLFYKLLEMILNDEKRKKPNDDITNLLLNEVFIQCLFACCLEI
VIYSYKSNDKIFPWILKALNLDAYYFYKVIEIIVRTEDQLSRDVVKHLNQIEEKILESLA
WQSDSPLWQTIESLPDGVPSCEDVSLPGTLETADPNASGQPVLRRIALDRERTHNDVQQS
PISSASERFQSPIAASGVAKKRLFSETRVTGQSVLRVGQSVLSSNRMVLDNGQRILLVPD
QLTVSRVSGTQSNNTAQATNRDAARPRRTGSVALFFRKFYNLACVRMQDLCNSLEILDND
KKKIWTIFEYSVKERTELMKDRHLDQILMCAIYVICKLVKMEKNSFTEIMRCYRLQPQAE
SHIYRSVLIEKVPNDGDSNTSNNERSEDNSVLGENVTPPTPTNMAGTSQNFDGEKRGDLI
KFYNTVYVPQVKEFANKFGSARGSVMNLSLSPLPKGKAPANSPVRRVTSSIMTRTLNPRA
ISASPAPQLTYCFSRSPAKDLEAINKMMISVDAKKSVGKRLLADDTDVEMTEGPSPKKTT
TFVARKLENIIGERRTQNQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggacgatattgaggactcgatgtacagccggcaccaggatctatgccag
aagctaaatatggacgcgactgccgcgtccgaagcttggaaatcctacgaaactatccgc
cagaactacactctcgagggtgaccagttgcattggataggatgtgcagtatatgtagct
tgtagaaagttttctatacctacagtaggaaggccaggcacaaatgtagaaggcaattgc
gtatctctgacccgtctgttgcaattgtgtaatcttccactgatacagttctttagcaaa
agcaaatcatgggcagatatgacaaacatgtcgcaagacttccgtgccagaatagacaag
ctagaggcaaatttctcggtgtctatgctgatatttaagaagtatcaaccaatttttacc
tttatattcaaagatccacgagaggatacctctagaccatctagatccagaagacacaag
gcagtaccttgtacatccactagagtttttgaattttgttggacactatttatatgcata
aaaggtgcaattcacgatatctcggatgatcttgttagttcttatcatctcttgttagtc
tgttgcgatcttatatatagcaatgctttattggctaacaggaaagacctgctaaatcct
aattttcctggtttaccagcaaatttcaatgatgagaattatactccaccgcaaacagca
aactgtattgttaacttactatgtgaacatcatgatgcaatcgctgttgaggctaaagct
ataaaggaatattatatgaagaattatattaataaattatttaacgacagaatcttacgt
ggtgatcagtcaaatttttctgctatactagaagcattgaattttgataataatagcaag
gccattaacaaaacttatgagcaacgcatgctaagcgtcggagattttgacgaaagaatt
ttcttagcgaaatggagaagagtaagtttgatcgatgtatcaaattcaaatatatttggc
caaaacagtgctaagcatgtccagtttgctaatcatgaagttttacaaggtcatgatgct
aatgagaacattggttcccctactcagatgataaatattgatgatttcaatgagcgattg
cagataaagagagaacagtacgctgggcagatacaatatttggctcctcctacgccattg
accggtcgtaaatatctccgatcgaaggacgtatctaatataacgccagtaaccacagca
actcaaagcgtcattaaattacaagctttgatagctgggcaatctgcaccgagcgaaagt
ctattacagatgcttaacaattgttctcaagatgttaagtcctcactcgaggcaaaagtt
aaacagattggtgaactattctgcgcgaactataataacaatgcaaataacattaacata
aacgacgatgcaacatccgattttggaaagaagcgtcttcttatgggacaaactttgttt
tacaagcttctcgaaatgattctaaatgatgagaagcgcaaaaagccaaatgatgatata
actaatcttcttttgaatgaagtatttattcaatgcctttttgcttgctgtctcgagata
gttatatattcatacaaaagtaacgacaagatattcccttggatattaaaggctttaaat
ctagatgcttactatttctataaggttatagaaattatagtaagaaccgaggaccaattg
tcacgggatgttgtcaagcacttaaatcaaatcgaggaaaaaattctcgaatccttggct
tggcagagcgacagtcccttatggcaaactattgagtctctacccgatggtgtacccagt
tgcgaggatgtttccttacctggcactttagaaactgctgatccgaatgcatctggtcag
cctgtattaagacgaattgctttggatcgggaacgtactcataatgacgttcaacagagt
ccgatttcatcagcttcggaaagatttcagtctcctatcgcagcatctggtgtagcaaaa
aagcgattattttctgagaccagagtcacgggtcaaagcgttcttcgtgtcgggcagagt
gtattatcttctaatagaatggtattagataatggccaaaggatacttttggtacccgat
cagcttaccgtctcgagagtgtcgggcacgcaatcaaacaatactgcacaagcaacgaac
agagatgcagctagacccagaaggacgggttccgtcgcgctattttttcgaaagttctac
aatcttgcatgcgtacgcatgcaagacttgtgtaattcgttggaaatattggataacgac
aagaaaaagatttggacgatctttgaatactccgtcaaggaacgtaccgaattgatgaaa
gaccgacatctcgatcaaatcttaatgtgtgcaatttatgtaatatgtaaattggttaag
atggagaagaactccttcaccgaaattatgcggtgctatcgtctgcagccacaggcagaa
tcacatatatatagatcggtgcttattgaaaaagttcccaacgatggagattcgaatacg
agcaataatgaaagatcggaggataatagtgtgttgggagagaatgtaactccgccaaca
ccaacaaatatggccggaacgtcgcaaaactttgacggagagaaacgcggcgacttaatc
aaattctacaacacagtgtacgttccgcaagtcaaagaatttgcgaataaatttggatcg
gctcgtggtagcgtcatgaatctctcgttgagtcctttaccgaaaggaaaggcacctgct
aattctccagtaaggcgtgtcactagtagtattatgacacgcactcttaacccaagggct
ataagtgcatcaccggcaccacaattaacttactgcttcagtcgtagtcctgctaaggac
ttagaagctattaataagatgatgatatctgtagatgcgaaaaaaagtgtgggaaaacga
ttacttgccgatgacactgatgtagaaatgacagaaggtccatctcctaaaaaaactaca
acttttgttgcacggaaattagaaaatattattggagaaagacgaacgcaaaatcaataa
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