Pogonomyrmex barbatus (red harvester ant): 105425343
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Entry
105425343 CDS
T04903
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105425343
03015 mRNA surveillance pathway
105425343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105425343
03041 Spliceosome [BR:
pbar03041
]
105425343
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105425343
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
105425343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
105425343
NCBI-ProteinID:
XP_011634367
UniProt:
A0A6I9WR93
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGME
DEVVIEFVYNQLEEKFPDPRKMQLNLTGFLNGRNARSFMGELWDLLVSAQESVTGIPETF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDDADSKVKKEEKDRGSSKERRRDRS
RDRDRDRSKRSRSRDRHRDRDRSSRKRRSVSRSPSKNSKDNGKDMPEIKIEREDSPQPEN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESLEKSTRKSRSGSKSPTAR
SKKSRTKSPSRDSKIRRSRSPASKLRRSRSKSRSRRSRSKSRRSKSRSQERTKSKRSKSK
SPRSRSRSRSKKSRSKSEDRSKSRKSRSDSSDSRSSKSRSKSLEKRKDNGDSNRKRNGST
SSSSASEEEKDAKDKNDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRERKSAPKRRSP
SPRKDRGRSKDRDRNRSRDRSRDRSRDRSRDRSRDRSRDRNRRRSLDRDRDRRRERERER
DRDRLDRYSGSRSMRPPSVRRPPNRRSSPPRRSPARYRRRSPSPEDRRRRRSLDRRRRSS
ERRDRRRSLDRRGSRRRSPDGRDRSSRYDRSSSRDRSSRRDRSRERRDKDRRSRSKDRRS
RSKDQRSSVDRSRDGKRSPDRSKDTKDKTKDRKVDEKTKRPPDTGSRKELRNGRSKSSSS
ESSESSSSSNEDESLRKSVENKTPQEKREREREHVDDAKKKEKEKTAKEEPAKRPEKEIK
KMEPVTTKKPEPSVSPKKLQVTSLPITRHRFSKSLSRTPSPFKKTEDIMAVTVKMKQTIK
EDIKDDSLTKVGEANFTAGDTFPLKKDEKSLKTTKLVTEDKKAIQKPLEPSSKKSVEVAK
KTKREKRDGSTDSEDSDGEGKRKTRKIEKSKKSKKASTDEDKSDKSKAGSSSESEDDRKH
SDKNKKARDTSRTDSIDDRNKDKKDNRKREAIENDSRKRSRKEIEEELKKSKRSRRDSSS
GEEEQKSKRNRNEDDRSRSRKSKRDSSSDEEPKKTRKRRDTSSDEEKSRSRKSRKDSTSE
DESKSKSKKSKRDSSSDDDDLIDKDSKKKRKVDDSSDDEKVKKKRKKKAKTSTSESEESE
VEEKKKKKEKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKSMKKG
HSIERSD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagggacaactgcttcgcaggataccaggttcagtgacaaggagaaaaaa
ctactgaagcaaatgaaatttggagattctttgacacagaaagtggatatgagcaaagtg
aaacttgatgtgattaagccatggatcacaacaaagatcacgcagattctagggatggaa
gacgaagtggtgatagagtttgtgtataatcaacttgaggagaagtttcctgacccccga
aaaatgcagctcaatctgacaggcttcttgaacggtaggaatgcccgttctttcatgggt
gaattatgggacctcctggtctctgctcaagaaagtgttacgggtattccggagactttc
ttacaacaaaaaaaagatcaaattaaaaagcgtttggaagagcaagaaaaacttcaagca
tcattggcagaaaaggagaaagaaaaggaacgtgagaaagaaaaagacgatgctgatagt
aaagtgaagaaggaagagaaagatagaggttcatcgaaggagcgtagaagggatcgaagt
agggatcgcgatagagacaggagcaaaaggagcagatcgcgagatcgacacagagatcgt
gatcgatcaagccgtaaaagaagatctgtttcgagatcaccaagtaaaaattcgaaggac
aacgggaaagatatgcccgagattaagatcgaacgagaagattcaccgcaaccggaaaat
gctattcctttgatgccagttaaaactaaaccagaagctgcagttgcaatatcaagattg
caagctaaattgatgagtattgctgatggaaaaaagaagaacaatcgtacgccatcgccg
gaatcattggaaaagtcaacgagaaaatcgcgttctggatctaaatcaccaacggctcgt
tcaaagaaatccagaaccaaatcacctagtcgagattcgaaaatacgtcgatcacgatcg
cctgcttcaaaattaagacgatctcgttccaagtcgagatctagaagatctcgatctaaa
tcgaggagatctaagtcgcgctcgcaggaacgtacaaagtccaagcgaagcaaatctaaa
tcgccgagatcacgttcacgatcgcgatccaagaaatctcgatccaagagcgaagacaga
agcaagtcgagaaaatcgagatctgattcgagcgattcgagatcctccaagtctcgctca
aagtctttagagaaacgtaaagacaatggagattccaatagaaaacgtaatggtagtaca
agcagtagttccgcatctgaagaagaaaaagatgcgaaggataaaaatgactttgagata
cgaaagaagaaagatggcgtgcaggctaagagatcctacaggaaaaccaataaagacgat
agtggcagtgatagcgactctagtcgggagaggaaatcagctcctaaaagaagaagtcct
tcgccacgcaaggatagaggtcgatctaaggatagagatagaaatagatcacgggatcga
tcacgagacagatcacgagatagatcgcgagatagatcacgcgatagatcacgagatagg
aaccgaagaagatcattggatcgggatcgcgacaggagacgggaacgcgaacgcgaaagg
gacagggacagattggaccgatatagcggcagtcgtagtatgcgaccaccttcggtgcgc
aggccgcctaataggcgcagtagtcctccgcgcagaagtccggcaagatatcgtcgtagg
tcaccgagtcccgaagacagacgtcgcaggagatcgctggatcgtcgaagacggtcatcg
gagagacgcgacagacgccgttcactcgatcgacgtgggagccgacgtcgttcgccggat
ggacgggatcgatcgagcaggtacgatagatcttcctcacgtgacagatcaagtaggcgg
gatcgctccagagaacgacgagacaaggatcgtagatctagatctaaggatcgtagatcg
agatccaaggatcagagatcatcggtggatcgttcgagagacgggaagcggtctcccgat
cgttcgaaggataccaaggataagacgaaggacaggaaagtggatgaaaaaactaaaaga
ccgcctgatacaggatcgcgaaaagaattgcgaaacggccgatctaagtcaagtagctcg
gaaagtagcgagagtagttcctctagcaatgaggatgagtcacttaggaaatcagtcgag
aacaaaacgccgcaggagaagcgagaaagagaacgtgaacacgtggacgatgccaagaaa
aaggagaaagaaaaaactgcgaaagaagaacctgctaagcgaccagaaaaggaaattaag
aagatggaacccgtcactacgaaaaagccagaacccagtgtttctcctaagaaacttcaa
gttacttcacttcctattactagacatagattctcaaagagtttgtctcgtaccccctcg
ccgtttaagaagactgaagacatcatggcagtaacagtcaaaatgaaacaaacgattaaa
gaagatattaaggatgattcactaacaaaagttggagaagcgaattttacggctggagat
actttccctctaaaaaaggatgagaaatctttaaaaacaacgaaactagtaacagaagat
aaaaaagctattcagaaaccattggaaccttcatccaaaaaatctgtagaagtagctaaa
aaaacaaagagagaaaagcgcgatggttctacagatagtgaagatagtgatggtgaaggc
aaaagaaaaacaagaaagatagaaaaatcgaagaaatctaagaaagcttcaacagatgaa
gataaatctgataaaagcaaagctggatctagttcagaatctgaggatgatagaaaacat
tcagataaaaacaaaaaagccagagatactagtcgaaccgattcaatagatgatcgtaat
aaagataaaaaagataatagaaaacgcgaagccattgaaaatgattcacgaaagcgttca
aggaaagaaatagaagaagaattgaaaaaatcaaaacgatcgcggagagattcttcttct
ggtgaagaagagcagaagtctaaaagaaatagaaacgaagacgatagatccagatctcgg
aagtcaaagagagactctagttctgatgaagaacctaaaaaaacaaggaagaggagagat
acttcatcagatgaagaaaaatctagatcgcgaaaatccagaaaggattcgacaagtgaa
gatgaatctaaatcaaaatcaaaaaaatccaaacgagattcgagttcagatgatgacgat
ctcatcgataaagattcaaagaagaagaggaaagtcgatgatagttcggatgatgaaaag
gtgaaaaagaagcgtaagaaaaaggcgaaaaccagtacaagtgaatcagaggagagcgaa
gttgaagaaaagaagaaaaagaaagaaaagaagcacaagaaacataagaagcataagaag
catagaaagcataagaagaagaaggttgcggattcagatgaatctgatgtaagtgaaggt
aataccgaagaactggaaaagaaacttcgggaaaaagcgttaaagtctatgaaaaaggga
catagcattgaacgaagtgattga
DBGET
integrated database retrieval system
