Pogonomyrmex barbatus (red harvester ant): 105425445
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Entry
105425445 CDS
T04903
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105425445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105425445
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105425445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
YabA
Motif
Other DBs
NCBI-GeneID:
105425445
NCBI-ProteinID:
XP_011634522
UniProt:
A0A6I9W0S8
LinkDB
All DBs
Position
Unknown
AA seq
2177 aa
AA seq
DB search
MHREKRLEQERVLLSQQMASLEEELAKRTSELQTARSEASARALLIDTKLSQREEELRIA
NETNSQLRESVSSLQKQCDELAQKVEQQRTHEIAINDSYQKEINAQKNLTNLYESMKDDA
NAKAEEISNAASELQKLVDSTAEEYGTLETKYNQLLLQHKQDIDNKEQSIQELTKELEHA
NELLKNIQQEKLNQAVEQLAPTAAITSRVLRRGLSLTQIYTQLVEVSNELTLEREENERL
KSQMDVILHELEQKAPLVQQQRQDYEVAMANIATLTSRLDELLIENQRLHENSDETNHLI
KHHSTENQRLKTELADLARQVCYLLKEVQESRTGIRVETRDLSSSIDTDDILSSQIISKK
LVTFKDIEELQENNQKLLAVVRALSSKQEEIERATDEINSGEMKEKLDRYMEQLTEMQAA
QERQSKMLDGLLKQRDMYKNMYQQIKNSNEKRKEEIGKDIEASKLEEESKIVKNDEEKQD
LSKKLKETEDKCKHISDEYEIYRKERTAHEKMLSEEVERLRKEAEANSARCCRLRAQLDS
ANERFTLLQGNVASYKSQIKTLEEKCTNYSVTISKHEQSIMILKDETLAAQTRLSRAEVQ
LENLRQERQLLRDSEGRLLKEREIYQRERQTQALLKADMESIKASLERVQAEGQLRAEHR
LDDANRECAALRRRLQEEQDRFRELAGHLERQLATVQERLKEERELNERLKTELDQAREI
EAQNSQKIDQLNNKLRQVAAHSIAKPLTGDEGLVKKVKELEMQLSASEVEAKSLSEQLKA
ARQQSQQYCDIAESAETQLRELTVEYNKCKEELENALKESRVEVISLQKRVKELGDDLAK
MSNGKQETDSELRDRLAEANRKLEELDELKVELELLRNDLKSVSVTAKEAEDKYTKEMMQ
HSSDLQILAKLKEEAQQVQQRLDILTQERNAAVEALEIEKSASKQREQKFMNELNEAQTR
ITDLDTQNVLLHNQIQELGDRIAIMQSQQTKISGRDSPDTSLEILNKSFSSLEENSNSIE
QLLKVMKYLRREKDLALAKSDVLRAENLRLKSQIEVMGKRLKETEILLNSEREKAEIDIR
TTSKHAELLRKVETLNAITDSNRILREERDNLSMKVNELTAKVNALSEEVIPLRDISRDL
TAKTEALTEENNSLKGEATRWRQRANTLLERANKASPEDWRRLQTERENLSKLLTSERET
YAKKIEEFNQMKTEKVKLEEQLTQLQKQIQTQDEQMSRASEEARKLGQDLNEALADSSSK
AKDLISLKKELGEKEVILNDIRNKEIQIRKIAKKYKTQFEELARTVEEEKNRSEETRNEG
TSGITTQEREDQLREEGRQELRQANTELITKIDDLTRQMTAAQSETDNLRKEIEAMNRNS
VEKEERAKQVLKGARTKIMQLTESKKVCEKELLDLKSRIESVGSNTGVQGDSDTEHDARL
VALKSQMEGRISRLEHEKSEIQAEKEALLLRVTQLQRQLSGVSAISATTEPPTANIKPMS
ARAETPLASIRPMSVVVQSRTAAVLPTTAGAPVMVAPHQMQQQVVHTTETSSPTSSLTDF
QPASTSSSSQSAQTSSLRQLVVQPQLSESAESTQREDPESAETLNLQPQQQQCQQQQQQQ
QQTVALVSPRVEQQQQQQQITISDQQQTVASSSTQSVSTSQASTGLKRSRGLDSTASGSG
IIEGLDHGRQEQVQSPKTKRSRQDISATASASASEVEYQVPTSSQRDQDEEVEEGCVVVV
DCDEGEGGGNHQTQEEEEFDNDPYEEMEEEEEMPYEVEVEVERDNNEVEIIMEEDSTSVE
IPRQGQATIPANQQQSEAISSAGPTGEPPTSFTTRSSRGIAPMPRQQQQQHLLLPQQGYE
DGGDDCIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGDSSTPTTASSTPSLTTPTGCT
TRIFGSTASAVVQVVQESLEDNRIDLTQLEDGGTGRSVPTTPLQVSPAADLPPSTSSQSE
EQETTVAPVAVTATSGDNSEETNIPSIRIVGADDQQHGHLTEATESTTPSEGVSLESEKR
GEEPVALASGEDDTVDTVEATEEAGNELAEDEVEEENREAEASPSSNTRQRTMAASLAAA
GDSNSARGVTVRRSPRSPFRAARGARPTPIVWGETQSGRGQPVMRGHATRGSTNEGGRGR
GARGRRMRSKYPYARYS
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgcatagagagaaacgattagagcaagagcgagtgcttctttctcaacaaatggcgagc
cttgaagaagaattggccaagaggacctctgaacttcagacggcaagatccgaagcctct
gccagagctcttttaattgacaccaagttatcacaacgtgaagaagaactgagaatagct
aatgaaaccaattctcaattacgagaatctgtttcttctcttcaaaaacaatgtgatgaa
ctagctcagaaagtggaacaacagagaacccatgaaattgctataaatgattcctatcaa
aaagaaattaatgcacaaaagaatctaactaatttatatgaatcgatgaaggatgatgct
aatgccaaggctgaggaaatttctaatgcagcgagcgagctacaaaaacttgtagacagc
actgcagaagaatatggcactttagagacaaagtacaatcaactattacttcagcacaag
caagatattgataacaaggaacaaagtatccaggaattgacaaaagagttggaacatgct
aatgaattactaaagaatattcaacaagagaaattgaatcaagctgtagaacagttagca
cctacagcagctataaccagtcgagtgttacgaagaggtttaagtctcacgcaaatttat
actcaactagttgaagtctctaatgaattgactttggaaagagaagaaaatgaacgtttg
aaatctcaaatggatgtaattcttcatgagttggagcagaaagcgccattagtacaacaa
caacgtcaagattatgaagtggctatggcgaatatcgcaacgctgacaagcagattggac
gaacttctcatagagaatcaacgacttcacgaaaattctgacgaaactaaccatcttatc
aagcatcatagtacagaaaatcaaaggctgaaaactgaattggctgacttggctagacaa
gtctgttatttgcttaaagaagttcaagaaagtcgtactggtattcgtgtagaaaccaga
gatttatcttcttctatagacactgatgacattttgtcatcgcagattatcagcaagaaa
ttagtgacttttaaagacattgaggaattgcaggagaacaatcaaaaactcttagcagtt
gttcgcgcattgtcatccaaacaagaggaaattgaacgagctactgatgaaataaattca
ggcgaaatgaaagagaagcttgatcgttatatggaacagttgacagaaatgcaagctgcg
caagaaagacaatcaaagatgttggatggtcttttgaagcagagagacatgtacaagaat
atgtatcaacaaataaaaaattccaatgaaaagagaaaggaggaaataggaaaggatatc
gaagcgtccaaactagaagaggaatccaaaatagtgaaaaatgatgaagaaaagcaagat
ttatccaaaaagttaaaagagactgaggataaatgtaaacatatttcagatgaatatgaa
atatatcgaaaagaacgaaccgcgcatgaaaagatgttaagtgaagaagttgaaagactc
aggaaagaggcagaagcaaattcagcgagatgttgtagattgagagcgcagttggattcg
gcaaacgaaagattcacgcttttacaaggaaatgttgcttcttacaagtcccaaatcaaa
acacttgaagagaaatgcactaattacagtgtcaccattagcaaacatgaacaaagtatt
atgattttaaaagatgaaacacttgcagctcaaactcgtttatcacgagcggaagttcaa
ctagagaaccttcgtcaagaacgccaacttctgcgagattctgagggacgtcttctaaaa
gaacgagagatttatcaaagagaaagacaaactcaagctttacttaaagcagatatggag
tctattaaggctagtttagagcgagtccaggctgaaggacaactaagagccgagcacaga
ctcgatgacgccaatagagagtgtgcggctcttcgacgccgtcttcaggaagaacaagat
cgtttcagagaattggcaggtcatttagagagacagttagcaaccgttcaggagagatta
aaagaggaacgtgagttgaatgaaagattaaaaacggagctggatcaagcaagagaaatt
gaagctcaaaacagtcaaaaaattgatcaattaaacaataaactgagacaagtagccgcc
cattccattgctaagcccttgacgggtgatgaaggtctcgtgaagaaagtaaaggaattg
gagatgcaactgagcgcctctgaagtcgaagcaaagtcactctctgaacaattaaaggca
gctagacaacagagtcaacaatattgcgacattgctgaaagcgctgaaacacaactaaga
gaattaacagtcgaatataacaagtgtaaagaagaactagagaacgctctgaaagaatcg
cgagtagaggttatttcattacagaaaagggtgaaggaactgggtgatgatttggcgaag
atgtcaaatggtaaacaagaaaccgattcagaattaagagatagattggctgaggccaat
agaaagctcgaagaattggatgaattaaaagttgaattggaattgttaagaaacgatcta
aaatctgtctctgtcacggccaaagaagcagaagacaaatatactaaagaaatgatgcaa
cattcatctgatttacagattttggcaaaactgaaagaagaagctcagcaagttcaacag
cgacttgacattctgactcaagaacgaaatgcagcagtagaagctctcgaaattgagaaa
tcagcctcgaaacaaagagaacagaaattcatgaacgagctcaatgaagcccaaacaaga
atcacagatctggatactcaaaatgtacttttacacaatcagattcaggaattgggtgat
cgaatagccatcatgcagagtcaacaaaccaaaataagtggaagagatagtcctgatacg
agtctggaaattctaaataagagtttctcctctttggaagaaaattctaattcaattgaa
cagttgttgaaagttatgaagtatttaagaagagagaaggacttggctttagccaaatct
gatgttcttcgagctgaaaatcttagattgaaatcacaaatcgaagtaatggggaaacgg
ttaaaagaaaccgaaattttgctcaattctgagcgagagaaagctgagattgatataagg
actacatccaagcatgcagaattattgcgcaaagtagagaccttaaatgccatcacagat
tctaatcgaattctcagagaagaaagagataatctgagtatgaaagttaacgaactaaca
gctaaagtaaatgctttatcagaagaagtaatacctcttcgagacatatccagagattta
acagctaaaactgaagctttaacagaagaaaacaatagtttgaaaggcgaggcaaccaga
tggagacaaagagcgaatacattactggaacgagcgaataaagccagtcctgaagactgg
cgacgacttcaaactgaaagagaaaacctgagcaagttattaacatccgaaagagaaact
tatgcaaaaaaaattgaagaatttaatcagatgaaaacagagaaagtaaaactcgaggaa
cagctgacacaattacaaaaacagatacaaacccaagatgaacaaatgtcacgagcatca
gaagaagctcgcaaattaggtcaagatcttaatgaggcattagctgattcttcttcaaag
gcaaaggatttgatatctcttaaaaaggaacttggtgaaaaagaggtcattcttaatgat
attagaaataaggaaattcagatacgcaaaatagctaagaaatataaaacacaatttgag
gaacttgcgagaaccgtcgaggaagaaaaaaatcgcagtgaagaaactagaaacgagggc
acttctggtataacaacgcaggaacgagaagatcaattgcgagaagaaggtcgccaagag
ctccgtcaagcgaatacagaactcataacgaaaatagatgacttaactcgtcaaatgaca
gcggctcaaagtgagaccgataatttgagaaaggaaattgaggctatgaaccgtaatagt
gtagagaaggaggagagggcaaaacaagttcttaagggagccagaacgaaaattatgcag
ctgaccgaatcgaagaaagtatgcgaaaaagaattattagatttaaaatccagaatagag
tccgtaggaagcaatacaggagttcaaggagattctgatactgaacatgacgcgcgatta
gtagcactgaaatcacagatggaaggtcgtatttctagattggaacatgagaaatcagag
atacaggctgagaaagaagcgcttttgctgcgagttactcaactccagaggcaattgtca
ggagtgagtgctataagcgcgactacggaaccaccgacagcaaatattaaaccgatgtca
gccagggcagaaacaccactggccagtatcagaccaatgagcgtggtagttcaatcgcga
acggctgccgttttaccgactacagctggtgcaccagttatggttgctccacatcaaatg
cagcaacaggtagtgcatactacagagacgagttcaccgactagcagtcttaccgacttc
caaccggctagtactagtagttcttcgcaaagtgcacaaactagcagtctacgccagttg
gtggtacaacctcaactaagtgaatcagcggaatcgacgcagagagaagatccagaaagt
gcggaaacacttaatttgcagccgcaacagcaacaatgtcagcaacaacaacaacagcag
caacagactgttgcattagtaagccccagagtggaacagcaacaacaacagcaacagatc
actatcagtgatcaacagcagactgtagcaagcagctctacacaatcagtcagtacttct
caagcttccacaggacttaaaagatcccgaggcttagactcaactgcttccggttcggga
ataattgaaggattggatcacggacgtcaggagcaagtgcagagtccaaaaactaaaaga
agtagacaggacattagtgcaactgcaagtgccagcgcttcggaagtggagtatcaagta
cccacatcaagtcagagagatcaagatgaagaagtagaagagggttgtgtagtagtagta
gactgtgatgagggtgaaggtggaggcaatcatcaaacccaggaagaagaagaatttgac
aatgatccgtacgaagaaatggaggaagaagaagaaatgccctatgaagtggaagttgaa
gttgaacgagacaacaacgaggtagaaattatcatggaggaggattctaccagtgttgaa
atccctagacaaggtcaagccactattcctgccaatcagcaacaatctgaagccattagc
agcgctggaccaacaggcgagcctcccacgtcttttacaacaagatcatctagaggcatt
gcacctatgcctagacaacagcaacagcaacatcttcttttgccacaacaaggttacgag
gatggtggcgacgattgcatcgtaccaagcacacctactctcttcgttcctcgtcgcgac
ggttttggtgaagctgttagctctccgcaggtgccacaaggtcgtttcacttttggagat
tcttcgacacctacaaccgcttcttcaacgccatccttgacaacacctacaggctgtact
actagaatctttggttcaactgcttctgccgtggttcaggttgtccaagaaagcctagag
gacaacagaattgatttgacacaactggaagatggtggaactggtcgtagtgttcctacc
acgccgcttcaagtttctccagctgcagatttgcctccttcgaccagtagccaatctgaa
gaacaagagacaactgtggcccctgttgctgtaacagccacttccggagataattccgaa
gaaactaacattcccagtattcgcattgtcggtgcagatgaccaacaacatggtcatcta
actgaagccacagaatctacaactccaagcgaaggtgtgagtttggaaagtgaaaaacga
ggggaagaaccggttgctttagcatccggggaagatgacaccgtagacacggtagaagcg
acagaagaagcaggaaacgaacttgctgaagacgaagttgaagaggaaaatcgcgaagca
gaggcctcgccatccagtaatactcgtcaaagaacaatggcagcgagtctagcagccgca
ggcgattctaatagtgccagaggagtaacagtgagaagatcaccgaggtcacccttcagg
gcggcaagaggcgcgaggcctactccaattgtgtggggagaaacccagtcgggtagagga
caacctgtgatgcgaggacatgcaactagagggtctaccaatgaagggggacgaggacga
ggggcgcgaggccgacgaatgcgctcgaaatatccttatgctcgatattcgtaa
DBGET
integrated database retrieval system
