Pogonomyrmex barbatus (red harvester ant): 105425511
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Entry
105425511 CDS
T04903
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105425511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105425511
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105425511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
105425511
NCBI-ProteinID:
XP_011634622
UniProt:
A0A6I9W0Y7
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSFGSGFGASTSTPAPTFAFGTTPASTATPVKPVAGFGTPSFGFSTPTTSTPSLFGTPST
QTTGFGTGTGFGTPAATGFGSASTTGFGAAPTFGATPTSAFGSAPAFGSTSASSATTGFG
TTSTFGSAPASTTGFGNFGTAATTSTLSFGGFGGFGTTTTTSAPSLFGGFGTTSTPSTGF
GASTGFGAFGSKPITTTSTGFGGFGTGTGFTGFGTGLTQSQQQQQQQQQQPPSNTASEAL
YNAVFNCQLYNDERDNTIARWNLIQALWGTGKAYYSINAPPIDLTQENSLCRFKAIGYSR
IPDADNNDGLVVLCFNKKEKDVQDGKQQLIVFLNGLLGNKPNLTVTVDNVKSTGENKSQV
TVYVSEKGITGSYRKIPANELVAYLSQVMQKQQLVQNGVEDIFPLVKLDPSQLKEYLDNP
PCAIDARLWKQAQLDNPNPELYIPVPMVGFQQVKHRLKCQEEETARHRAFLDMAAEKIQG
LQRQHTATQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFEAMHSQ
ISAPTQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMEQQGMAQLISTI
NADLESLKIIKDGMSELLMSQSIS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtagcggattcggggcgtccacgtcgacgccggcacccacgttcgcattc
ggcaccacgccggcgtccacggcgacgccggttaaacctgtggcaggtttcgggactcct
tcctttggatttagtacaccgacgacttcgacgccaagtctatttggtacgccgtcgact
cagacgacaggatttggtactggcactggatttggtactccagcggccactggcttcggt
agcgcgtcgacgacgggttttggagccgcgcctacgttcggtgccacgccgactagtgcc
tttggctcggcaccagctttcggtagtacttccgcttcatctgcaaccactggatttggt
acaacttcgacatttggcagtgctcctgcttccacaaccggtttcggtaattttggaaca
gcggcgacgacgtcaacgttgagtttcggaggttttggtggattcgggacaactacgact
acgtctgcacccagtctgtttggcggattcggcactacgagcactccttcaacaggtttc
ggtgcatccacaggtttcggagcgtttggaagtaaaccaattaccaccactagcactgga
tttggtggatttggaacaggaactggattcactggatttggtactggactaacgcaatct
cagcaacaacagcagcagcagcagcaacagccgccttcgaacactgcatcagaagctctc
tataatgctgtgttcaattgtcaattgtataatgacgaacgagataatactattgccagg
tggaatcttattcaagcgttgtggggaacaggaaaggcttattattccataaatgccccg
cctatagatcttactcaagaaaattcattatgtagattcaaagccattggttacagtcgc
atacctgatgctgacaataatgatggtttagtggtactgtgctttaataaaaaagaaaag
gatgtacaggatggaaaacagcaattaatagtatttcttaatggtttattggggaataaa
cccaatctaacagtaactgtcgataatgtaaaatcaacgggggagaacaaaagtcaagtg
acggtatatgtatcggaaaaaggaataaccggatcttacaggaaaattcctgccaatgag
ctggtcgcgtacttatcgcaagttatgcaaaagcaacaattggtacaaaacggagtcgaa
gatatatttccactggtgaaacttgatccgtcacagttaaaagagtacctagataatcca
ccttgcgctattgatgccagattgtggaagcaagcacagttagacaatcccaatccggaa
ttatatattccggtccctatggtcggctttcagcaagtcaagcacagattaaaatgtcaa
gaagaggaaaccgctaggcacagagcgtttctggatatggcggctgaaaaaatacaaggc
ttgcagagacagcatacggccacgcaggcccgacttaaggaacacagacgtacattgtta
gaacttcagcacagggttttgcaggtgctggtacggcaggaaattacacgtaaagttgga
ttatccttacaaccggaggaagaagttctaacacgaagatttgaagcgatgcattcgcaa
attagtgctccaacgcaatataaaggtagaattagtgaaatgctctctcagctcagaatg
agacggcacattgatattcaaaaccaagaaagatatacgatggatcctatagcgcaggat
gatattaaagcgtatttaagtatggagcagcaaggcatggcgcagctcatttcgacaata
aatgctgatttagaaagtttaaaaattattaaagatggaatgtcggagcttttgatgagt
caaagtatatcttga
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