Pogonomyrmex barbatus (red harvester ant): 105425767
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Entry
105425767 CDS
T04903
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105425767
03036 Chromosome and associated proteins [BR:
pbar03036
]
105425767
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105425767
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105425767
SLIK complex
105425767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Tudor_4
Motif
Other DBs
NCBI-GeneID:
105425767
NCBI-ProteinID:
XP_011634984
UniProt:
A0A6I9W8F0
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MIDFQKTLESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSGSGSGSDSE
KSEKSDAPAAQSDSFQSKGSNHSTEAKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRL
ATNRESDSDSRKKFKKKGSHNSWNTESSDSESDETENRRPPPSKSLNRRAAQKAKEKTRV
RKKHISESSENSSFDSDDNRRQVSRRTGTAVSYKEESEEGTDSEDLVEVDESNAASTEPD
NAETIEQILGQRIGKKGVTGNVTTIYAVEENGDPNPDDLSNVETEVQYLIKWKGWSHIHN
TWESEESLKAQKVKGLKKLDNFIKRERRIEQMREYAEPEELDYLECQLELKQDLLKSYNN
VERIIADYKKPDSEHPDYFCKWESLPYADATWEDGTLIVKKWPEKIKEFRDREDSKRTPS
KHCKVLKSRPKFYQLNEQPAYMGKEKDLVLRDYQMDGLNWMIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVNSRNII
REYEWCYRGSKRLKFNVILTTYEIVLKDKALLGALNWAVLLVDEAHRLKNDDSLLYKALS
EFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFTSWEEFEKQHDNAAQKGYSKLHKQLE
PFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYEALRKGVKGSTTTFLNI
VIELKKCCNHAFLTKPIEAEKEKSNLNYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFS
QMVKMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMV
LDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLTAILKFGAEDLFKDEEDGDEEPAKVK
KNKQTAGPMHFTANNEPRAVDVIGELDPPIFDECKEKMRPVKKALKALDTPDMSLSEEER
VARARRCLYQIGNHINTCLAEYKNPEQISEWKSNLWYFASKFTNFKAKKLYRMYKNLVKQ
GGDNNSGAISSPDKKEDASNTAKQKSSEKVSHEKHFDKQQTESGNKDSRATKRKVDDIEE
NSNSSTQSKKHLSSISGVSSNISSTSTVTIGAVTITPITSTPNSTSSTTNSADTSRHKEQ
KESKHKDMKRDRDRDRDRERGHDRGADRGADRNIDRGIDRINVGKDDRIRRDGGYNMGHY
SGSREDDHWLSRDGRDIRDGRYGFGEHKRDRFDPYGRMSSGYHRDRDRDRDRGMHMNDKR
SDYYRYSSGPPSYGYGPGGYGGSSGSGGYPSDIAPGHFRSRGYAGDSYSNDWRPNKDYRR
DYDRRPPPPNANS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgattgacttccagaaaacattggaatccgaatccggtaaagaatccggatccgattcc
gagaatgaaagcaaaagcgatagctcctcttccggcagcaacagcggctcgggatcggga
tctgaaagcgactctagctcctcgagcggttccggttctggatcaggctccgactcggaa
aagtcggagaagtcggatgcacccgctgcacaaagcgatagcttccagagcaaaggctcg
aatcacagcaccgaagcaaagcttagagttaaacatgagtctagtcgcgagtgggatgag
aatcctgacatatacggcatcaggagatccgggcgttccaggaaggagcctgacagactc
gcgacgaatcgcgagagcgacagtgacagtcgcaagaaatttaagaagaaaggttcacac
aattcgtggaatacagaaagttcggattcagaatctgatgaaactgaaaatcgtaggcct
ccacctagcaaatctctaaacagacgtgcggcacaaaaagcgaaagagaaaactagagtg
cggaagaaacatatttctgaatcttctgaaaattcttcctttgacagtgatgataataga
agacaagttagtagacgaacgggtacggcggttagttacaaagaggaaagtgaagaaggt
accgatagcgaggatttggtcgaagttgacgaatcaaatgctgcgtcaacagagcctgac
aatgcggaaactattgaacaaattttgggacagaggataggcaagaaaggagttaccggt
aatgtaacaacaatctatgccgtggaagaaaacggcgaccctaatcccgatgacttaagt
aacgtggaaaccgaagtacaatatttgataaaatggaaaggctggtctcacatacacaac
acgtgggaatcggaggaatcattaaaagcacaaaaagtaaagggattgaagaaattagac
aattttatcaaacgtgaacgtagaatcgagcagatgagagaatatgctgaaccagaagaa
ctagattatttagagtgtcagttggaacttaaacaagatcttctaaaaagttacaacaat
gtcgaaagaattattgctgattataagaaaccagactcagaacatcccgattatttctgt
aaatgggagagtttaccatatgccgatgctacatgggaagatggaacattaatagttaaa
aaatggccagaaaaaataaaagaatttcgcgatagagaggattctaaaaggacacctagt
aaacattgtaaagtccttaaatccagacctaaattttatcaattaaacgaacaacccgcc
tacatgggcaaagagaaagacttagtattgagagattatcagatggatggacttaattgg
atgatacattcttggtgcaaggaaaatagtgttatactagccgatgaaatgggtcttggt
aaaacaatccaaacgatatgcttcctttattatttatttcatacgcaacaacttcatggg
ccatttttattagtagttcctctgtcgacaatgacttcctggcaaagagagatgtctcaa
tgggcacctgacatgaatttcgtcacttacttgggcgatgtcaattctcgtaatattatt
agggaatacgaatggtgctaccgaggttcaaagagactaaagtttaacgtcatacttacg
acgtacgagatagtacttaaggataaagcgttattaggtgccttaaattgggcggtgttg
ctagtggacgaagctcatagattaaaaaatgacgattccctgttatacaaagctcttagc
gagtttcataccaatcatcgtttattgattactggcactccattacagaatagcttgaaa
gagctgtgggccttactacacttcattatgcctacaaaatttacctcttgggaagaattt
gagaaacaacatgacaatgctgcacaaaagggatattccaagttacataaacaattggaa
ccatttatcctgcgccgagttaagaaggacgtcgagaaatctttgcccgctaaagtcgag
cagatcttacgagtagaaatgacatctttgcagaaacaatattacaagtggattttaacc
aaaaattatgaagcgttgcgaaaaggtgtaaagggttctaccacgacattcttgaatatt
gttattgaattgaaaaaatgttgcaatcatgcctttcttacgaaaccaatcgaggccgaa
aaggaaaagtccaacttaaattatttacagcaattaattcgtggttctggtaaattagtg
cttctggataaattattagtgagattgcgcgacacaggacatagagtactgatatttagt
caaatggtcaaaatgttagatattcttggtgaatatctgcagaggaggcatttcccattc
caaagattagatggaagtataaaaggagaactgagaaaacaggcattggatcacttcaat
gccgaaggatcgcaagatttttgttttttgttgtcaacgcgagcgggtggtcttggcatt
aatcttgccactgcggacactgtgataattttcgattctgactggaatccgcaaaatgat
ttgcaagctcaagccagagcgcatcgaataggacaaaagaataaggtaaatatctatcga
ttggttaccaaaaagtcggtcgaagaagaaatcgtagaacgtgcgaagcagaaaatggtc
ttggaccatttagtgatacagcgaatggatacaaccggacggacagtattagataaaaaa
aatgcggggaccaatagtaatccgttcaacaaggaagatttgactgctattttaaaattt
ggtgccgaagatttatttaaagatgaagaagacggagacgaagaaccagctaaagtgaaa
aagaataagcaaactgcaggtcctatgcattttactgcgaataatgaaccaagagctgtc
gacgtcattggtgaattagatccaccaatatttgatgaatgtaaagagaagatgagacca
gtaaagaaggcgttaaaggctctagatacaccagatatgtctctgagcgaagaagagcga
gttgctcgcgcgcgtcggtgtctctaccaaatcggtaaccatatcaacacatgtctggca
gaatacaagaaccccgagcaaatcagcgaatggaaaagcaatctatggtactttgcttcc
aagtttacgaacttcaaggcaaaaaagctttatagaatgtacaagaatctagtgaaacaa
ggtggcgacaataatagcggtgcgatatccagccctgacaaaaaggaggatgcttccaat
actgctaagcagaaatctagtgaaaaagtgtctcacgaaaaacattttgacaagcaacaa
acggagagcggtaataaagacagccgagcaacgaaacgtaaagtcgacgatatcgaggag
aactcgaacagtagtacacaaagtaagaaacatctctcgagtatttccggtgttagcagc
aatatcagcagcacatctacagttactatcggtgctgttacaattacacctataacgtca
acgccaaattccacatcaagtaccactaatagtgcagacacatcacgtcataaagaacaa
aaagaatcgaagcacaaagatatgaaaagggatagagatcgtgatagagatagagaaagg
gggcatgacaggggtgctgatagaggtgctgacagaaatatcgacagaggtattgatagg
ataaatgtaggcaaggacgacagaattaggagagatggtggatacaacatgggacattac
agtggcagtagggaagatgaccattggttatccagagatggaagagatattagagacggc
aggtacggattcggagagcacaagcgtgatcgcttcgatccttacggacgaatgtctagt
ggttatcacagagatagagatagagatcgagatcgtggtatgcatatgaacgacaaaaga
agtgattattatcgatattcgtcgggaccaccaagttacggatatggaccaggtggttat
ggtggtagcagtggtagtggtggttatccgtcggatattgcaccgggtcatttcagaagc
cgaggctacgcgggagatagttactccaatgattggcgacccaacaaagattacagacga
gattacgatagaagaccaccgccgccaaacgccaattcctag
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