Pogonomyrmex barbatus (red harvester ant): 105425887
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Entry
105425887 CDS
T04903
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03440
Homologous recombination
pbar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105425887
03460 Fanconi anemia pathway
105425887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105425887
03036 Chromosome and associated proteins [BR:
pbar03036
]
105425887
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105425887
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105425887
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105425887
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105425887
FA (Fanconi anemia) pathway
Downstream FA components
105425887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
Sec10_N
DUF5126
Motif
Other DBs
NCBI-GeneID:
105425887
NCBI-ProteinID:
XP_011635165
UniProt:
A0A6I9W227
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MPTDAVIPSTPLSLLPFINKNDQWSSDLETPQAEPQVKLRIKSTGKTEETPKLEQHTPDV
LDKIISDSPVIARATRRRSKRRIFRSSISIDSSAVTNNEDITVEVETPAISNNTNFASRD
DIAHVAKSDPSVENVFKDHKLQVPNKGQDTCNNENSENFNPVPDSSNTSTQEFFNDVSFS
KIDELCFDAFDDRRATETFVTSCNYKWNIEGMDKGINVEENKSIGFFTGHGASINVSKQA
LFKAKRLFAEAFDTDEIQTRNYEPFAKRNKQINRHLPSSSFVNISSNTREEALSKPKPSR
EQPKNYDVTDCKKLFTNETFSEEASKVPVFLSTASGNPINISKEALLKAKTLLADESDNV
DDDVFKKFYERSDNNSMTIKNVAVPSFPATNIRPIATSGKSKTLFAEQLNAAIESTSNKT
DNEQCDINISNIRQSINFEPLPKSKTLFAERNDSLESTLRKEMYNSDNEIKRQEVNVSKI
GFQTACNKPINISEQALSKAKALFAKLDDTYKAPVTKEIDNKMMGSETKISNIRLQSISS
TDISEQISKVKESFEQLNTSLESVVNRANVNDKEENRQEAKISPRIRFQTAGGKSINISE
QALSKAKTLFAKLDDKAPVVKEVDNKIKSSETKVSNMKLQCISSSEISEQISKVKESFEQ
LDTSLASAANRASVDDKVENGREAKVPSIGFQTARGTSIGVSKQALSRTKALLADLLDGP
LEMDIPESTGRDEGIQKRDLVIPYGGLQTASGRQVPVSSNAALIARELLTDDCPDESNPG
LARASLQKRELSETNADESTPQGRNRLSEMKKVRLSDEFHARRLFADNPCVDEARGPDEK
EPVPFVADSVLGSPKSDAVESTESDAVGSPVIGRQPVSRKRKSSGHQRREARADKRILDK
EDVTSRENIVRKAVSRGELEDDKPDTGTRKLAQVPEGRIKDDNVESREYGDTQVMMDFID
ESTKILQDRLAAALDQEAIITAKRRHGSKRSVGHLYRYKQINFNARLSLREISGGTLPLP
RSYRELVDRRIPPDVLEITAATAASYRFRCSDFYGNDVAYGNVGGIEMEDGARLILDENG
DTGVWEFLRAFLAAPGVDPNLVPARWVENHYRWIVWKLASMDRMKFSEIELPRMLTPSRV
MAQLKYRYDREIDRFQRPAIRRILEKDDVPSRRMILCVSSVVENNNVSMEVGKSPRVGVP
KWRIELTDGWYSINACIDIGMVRSISTGKVKEGTKLAMSGAELLNCDQGFHPLEVPADVY
LKLHTNSTRRARWDTKLGYTPCSGPIPIKLRNVCPSGGLIGKVTVVVARVYPMLYHEKTA
SGDSIVRNAKSEEKAQGKYEQQCWSKIEAFYANAEDFRRKGLSCETDDMAIQLSEDYENL
SEESISKKRRDELLQELHEKEERFKQRMQSKLRESLPGPRQVSQLLKVRVCDENANAILS
VWSPSEEVVDALKEGACVSLCNVVASGKRGTELQLTANRSAIFQPGKMRDASYPARACTP
LCEITNSEFAPPYGEFDTVGLVCSVGPAPYGMKDFEAVHLASNDSSYLSILFWQGIAGYG
YAEILTVGSIVACSNLEWRRATSWNVPAAYCTERSIFTRNPRRNHLYESFENLRNLITDP
IKYVESCTFELNVELQKKSTPTRFVASKSTPIKIYNSMSNADKKLVDYTSPLAIPKLGVV
DSSNYPAANLSIQKRLEKLQHYEEPPELSPIILKKSKRISLDFRSPVCISDVNLTKETLS
INHQSSDSNIPITEL
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgatgccgtaattccgtctacaccattgagtctgttgccttttataaataaa
aatgaccagtggtctagtgatttagagacaccgcaagctgagcctcaagtgaaattgaga
atcaaatcaacaggaaaaacagaggaaacaccaaagctcgaacagcacacacctgacgtt
ttggacaaaattatttctgattcccctgttattgctagagcgacacggagacgctccaag
cgtcgtatatttagatcttctatatctatagactcatcggctgtgactaacaatgaggat
attactgtagaagtagaaacacctgctatttctaacaatactaattttgcatcgcgagat
gatattgcacatgttgcgaaatctgatccatccgttgagaatgttttcaaagatcataag
ctgcaagttcccaataaaggccaagacacatgtaataatgagaattcagaaaattttaac
ccagtacctgacagctcaaatacatcaacccaagaattctttaatgatgtctcctttagt
aagatagacgagttatgcttcgatgcttttgatgatcgaagagcgacagaaacttttgtc
acaagttgtaactataaatggaatatcgagggtatggataaaggaataaatgtcgaggag
aataaaagtataggtttttttaccggtcatggtgcttcaatcaatgtttctaagcaagca
ttatttaaagcaaagagattgttcgcagaagcttttgatacagatgaaatacaaacgcga
aattatgaaccattcgctaaaaggaataaacaaataaataggcatttaccatcctcttca
ttcgtcaatatttccagcaacactagggaagaagctttatccaaaccaaagccatctaga
gagcaaccaaaaaattacgatgttacagattgcaaaaaattatttacaaatgaaactttt
agcgaagaagccagtaaagtccctgttttcctttcaactgctagcggcaatccgattaat
atctccaaagaagcattgttaaaagcgaaaacattattagcggatgaatcagacaatgtc
gatgatgatgtatttaaaaaattctatgagagatcggataacaattctatgacgataaaa
aatgtagctgtaccatcttttcctgcgactaatattagacctatcgctacttcaggaaaa
tccaaaactttattcgcagaacaattaaatgctgccattgaatccacttctaataaaacc
gataatgaacaatgtgacataaatatttcgaatattagacaatctatcaattttgaaccg
ttacctaaatcaaaaacattgtttgcagaacgaaatgattcattagaatcaacccttaga
aaagaaatgtacaacagtgataatgaaataaagaggcaggaagtaaatgtttcgaagatt
ggattccaaactgcttgcaataaacccatcaatatttcagaacaggctttatctaaagca
aaagcattgtttgcgaaattagatgatacatataaagcaccagttacaaaagaaatcgat
aataaaatgatgggttcagaaacaaaaatatcgaatataagattgcaatctattagtagc
actgatatttctgaacaaatatcgaaagtaaaagaatcgtttgaacaattgaatacttca
ctagaatcagttgtgaacagagctaatgtcaacgataaagaggaaaatcgacaagaagca
aaaatttctccacgtattagatttcaaactgctggtggtaaatctatcaatatctcagaa
caggctttatccaaagcaaaaacattgtttgcgaaattagatgataaagcacctgttgtg
aaagaagtcgataataaaataaagagttcagaaacaaaagtgtcaaatatgaaattgcaa
tgtattagtagctctgagatctccgaacagatatcgaaagtaaaagaatcgtttgaacaa
ttggacacttcgctggcatcagccgcgaacagagctagcgtcgacgataaagtggaaaat
ggacgagaagccaaagttccaagtattggatttcaaacggctcgcggaacgtctatcggt
gtatcgaaacaagcgttatccagaacgaaagcgttacttgcagatctattagatggtcct
ttagaaatggacattcccgagagcactggccgcgacgaagggatacaaaaacgtgacttg
gtaattccgtacggtggactgcaaactgcgagcggtcgacaggtaccggtttcgagcaat
gccgcattaatagcacgagaattactcaccgacgactgtccggatgagagtaatcctggc
ttggcgcgcgcatcgctgcagaagcgcgagctaagcgagactaatgcagacgagagcaca
ccccagggcaggaaccgcttgtccgaaatgaaaaaggttcgtctcagcgatgagtttcac
gctaggagactgttcgctgataatccgtgcgtcgacgaggctcgaggtccggatgagaaa
gagccggtacctttcgtcgcagactccgtcctgggatcgcccaagagcgacgcggtagaa
tcgaccgaatcggatgcggtgggcagtccggttataggaagacagcctgtctcgaggaag
cggaagagttcgggacatcaaaggagggaagcacgagcggacaaacggattctggacaaa
gaggatgtaacgtcgcgagagaatatcgtgcgaaaagccgtatctcgcggagaactcgag
gacgataagccagatacggggacgcgaaaactggcacaagttccggagggaagaataaaa
gatgataacgtggaatcaagagagtacggcgacacacaggtgatgatggattttatcgac
gagtcgacgaagatcctgcaggatcgtctggcagccgcgctggaccaagaagcgataatt
accgcaaagaggaggcacggatcgaagcgatcggtgggtcacctgtaccgttacaaacag
atcaatttcaacgctcgtttgtcgttgagggaaatcagcggcggcacattgccattaccg
cgttcctatcgagagctcgtcgaccggcggataccgccggatgtcctggagattaccgcc
gcgaccgccgcgtcctacaggttccgttgctccgacttttacgggaacgacgtggcctac
ggtaatgttggcgggatcgagatggaggacggcgcgcgtctgattctggacgagaacgga
gacacgggagtctgggagttcctgcgcgcgtttctcgccgctcccggcgtagatccgaat
ctcgttcccgcgcgctgggtcgagaatcattaccggtggatcgtgtggaaactggcgtca
atggaccgaatgaagttcagcgagatcgaattacccaggatgctaacaccttcgcgggta
atggcacagttaaagtatcggtacgatcgagaaatcgatcggtttcagcgaccggcaatt
agacgcatcttggagaaggacgacgtgccgtctaggaggatgattctatgcgtgtcgtct
gtagtagaaaacaataacgtaagtatggaggtagggaagagcccgcgtgtaggagtgcca
aagtggaggatagaattaaccgatggctggtacagtataaatgcctgtatcgatataggt
atggtgaggagcatatcgactggtaaagtaaaagagggcacgaaactggcgatgtccggc
gcggaattactgaattgcgatcaaggtttccatccgctcgaggtgccggctgacgtgtat
ttaaaactgcacacgaattcaaccaggcgtgcacgatgggacacgaaattaggatacacg
ccgtgttcgggcccgatacccatcaagttacgcaacgtatgtccgagcggcggtttaatc
ggcaaagtgacagtcgtcgtcgctagagtgtatccaatgttatatcacgagaaaaccgca
tccggggattcgattgtcagaaacgctaaaagcgaggagaaagcgcaaggcaaatacgag
cagcaatgttggtccaagatagaggcgttctacgctaacgcggaggactttcgaagaaaa
ggactttcttgcgaaaccgacgatatggcgattcaattaagtgaagattatgaaaactta
tccgaggaatccatctctaaaaaacgacgcgatgaactactgcaagagctgcacgagaag
gaggaaaggttcaagcagaggatgcagtccaaattgcgggagagcttgccgggaccgagg
caggtctcccagctgctcaaagttcgcgtgtgcgacgaaaatgcaaacgctattctctcg
gtttggtcgcccagcgaggaggttgtcgacgcgctcaaagaaggcgcgtgcgtttcgctc
tgcaacgtcgtggcttccggaaagaggggcaccgaattgcaactcaccgcaaatcggtcc
gcaatttttcaaccgggaaagatgcgcgacgcgtcttatcccgctagagcgtgcacgccg
ctatgcgaaataaccaattccgagtttgctccaccttacggagaattcgacacggtcggt
cttgtctgttccgtcggtcccgccccttacggtatgaaggacttcgaggctgtgcatttg
gcatctaacgattcctcgtacctctcgatattgttttggcaagggatagctggctatggc
tacgcagagattcttactgtcggatctatcgttgcgtgcagcaatttagaatggcgaaga
gcaacttcatggaatgtcccggcagcgtattgcacggaaagaagtatttttacgcggaat
cctcgccgaaatcatttatatgaatcctttgaaaatctgcgaaacctaatcacggatcca
attaagtacgttgaaagctgcactttcgagcttaatgtggaattacaaaagaagtctacg
cctacacgctttgtggcgagtaaaagtactccgattaaaatatataattcgatgtcaaac
gccgacaaaaaattagtcgactatacgtcgcctctggcgataccaaaattaggagtggtc
gacagttcgaattatcctgcagctaatctctcgattcagaaacgactggagaaacttcaa
cattatgaggaaccgcctgaactgtcccctattattttgaaaaaatccaagaggatttct
ttagattttcgatcgcccgtttgcatttcagatgtaaatttgacgaaggagaccttaagc
attaatcatcaatccagtgattcaaatatacccattacagaactatga
DBGET
integrated database retrieval system
