Pogonomyrmex barbatus (red harvester ant): 105425914
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Entry
105425914 CDS
T04903
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105425914
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105425914
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105425914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
Prok-RING_4
Hemotin
DUF2301
MpPF26
Cadherin_C_2
zf_RING_Vps8_fungal
EphA2_TM
PHD
zf-RING_Vps41
zf-C3H2C3
RINGv
zf-RING_4
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
105425914
NCBI-ProteinID:
XP_011635221
UniProt:
A0A6I9W0U4
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MRQCCLNHQILLWVIFLILYAAYSSADILVFSAVARHQIEEEFRDMPAKFGGIIPPEGIK
GMVVYADPPTACHKIQPPPNATDYNGNWIVLIRRYNCSFEIKVRMAQEAGYDAAIIHNMN
SNELEPMSAKDPVGILIPSVFVSEITGVVIKENYLYDQLYFVLINDDLPFNINTHLLLPF
AVVVGICFLIIIIFMIVRCIKDRRRQRRHRLSSSSLKKIPTHKYTKGDPYETCAICLDDY
VEGEKLRVLPCAHAYHSKCIDPWLTKNRRVCPVCKRKVFAADEQVVTDESDSDDDTAPLI
RDGHQGTQGGTFTRQRENPFNRARRSQARQDNSISSDTSSDSEQSFVTTEDSVNISAGEP
SNVTVFMVSDTHSINGEPQELERSVSSTNPHTVSLYADPQEFPAPVVQVASARRGIMGHS
AISNSDYYVETSDNTSVTASNSNRNNIIT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagtgttgtttaaatcatcagatcctgctatgggttatatttctgattttgtat
gctgcatacagcagtgcggatattttagtattttccgcagtggcgagacatcagatcgag
gaagagttccgtgatatgccagccaagtttgggggcattataccgccggagggcattaaa
ggtatggtagtttacgctgatccccctactgcatgccacaagatacagcctccgccaaac
gcaactgattacaatggtaattggatagtgttaataagacgttataactgcagctttgag
ataaaagtacgaatggcgcaggaagctggatatgatgctgctattatacacaatatgaac
agcaatgaattagaaccaatgtcagcaaaggatcccgtaggaattctgataccatctgta
tttgttagcgaaattacgggagttgttattaaagaaaattacttatatgaccaattatat
tttgtactgattaatgacgatctgccattcaatattaatacccatttgctcttacccttc
gctgttgttgttgggatatgttttctaattataattatttttatgattgttagatgcata
aaggatagaaggcgacagcgaagacacagattatctagttctagcttaaaaaagattcct
acacacaagtatacgaagggcgatccgtacgagacttgtgccatttgtttggacgattat
gtagaaggagagaaattacgagttttaccttgtgcacacgcttatcattctaaatgtatt
gacccatggttgacgaaaaatcgaagggtttgtcctgtctgtaaaaggaaggtttttgca
gctgacgagcaagtcgtaactgacgagagcgactcggatgatgatacagcacctcttatt
cgcgatggtcaccaaggtacacaagggggaacgttcacgcggcaaagagagaatcctttt
aacagagctagaagatcacaggccagacaggataatagtatttctagcgacactagctcc
gattctgagcagtccttcgttactaccgaggatagcgttaatattagtgctggtgaacca
tccaacgtcaccgttttcatggtgtccgatactcatagtataaatggtgaaccacaagag
ttggaacgttcggtcagcagcactaatccacacacggtgagtttatacgcggaccctcaa
gaatttccagcacctgttgttcaagtcgcatcggcacgacgcgggattatgggacattcc
gcgatatcgaattccgactattatgtcgaaacttcggataatacgtcggtaacggccagt
aattcaaacagaaataacattattacgtaa
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