Pogonomyrmex barbatus (red harvester ant): 105425991
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Entry
105425991 CDS
T04903
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105425991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105425991
03041 Spliceosome [BR:
pbar03041
]
105425991
03036 Chromosome and associated proteins [BR:
pbar03036
]
105425991
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105425991
Spliceosome [BR:
pbar03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105425991
Complex B
105425991
Complex C
U2 SnRNP specific factors
105425991
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105425991
TFTC complex
105425991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105425991
NCBI-ProteinID:
XP_011635341
UniProt:
A0A6I9W2G5
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRQTGGTKDYIIVGSDSGRIVILEYIPAKNIFEKVQQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHADSAHLIVIETEHNAYTDETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLTEETNEAVFGAPRAGPGLWASLLRIMAPTTGETFEAHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNATCTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVVSYHSAYISYV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtataatttaacccttcaacgtgccacaggcatcacgcatgccgtacatggc
aatttctccggcagtaaaatgcaagagattctcgtttctcgcggcaagtcattagaattg
ctgcgaccggatccaaatacgggaaaagtgcataccttgttgacggttgaagtttttggc
atcattcgatctctcatggcattccgacaaactggtggaacaaaagattatattattgtt
ggatcagattccggacgtatagtgatattagaatatattcccgctaagaatatctttgag
aaggtacagcaggaaacttttggtaaaagtggatgtagacgtattgttcctggccaatat
ctcgctattgatccaaaaggcagagcagttatgataggagctgttgaaaagcagaaactt
gtatatattctcaatagagatgctgaggctcgtctaacaatttcttctccattagaagct
cataagagtaacactctggtgtatcatacagttggtgttgacgttggttttgagaatccc
atgtttgcatgtctagagatcgattatgaggaagccgacagtgatcccacaggcgatgcg
gcggtgaaaacgcagcagacgttgacgctgtatgagctcgatcttggtctaaatcatgtc
gtacggaagtatagcgagccgctggaggaacatgcaaattttcttgtatctgtacctggt
ggcaacgatggcccaagtggcgtactcatttgctctgagaattatctcacatacaagaat
ctcggtgatcagcacgatatacgttgcccgattccacgacgtcgcaatgacttggacgat
cccgagagagggatgatattcgtatgctcagctacgcacaaaactaagagcatgttcttc
ttcttggcacagacagaacagggcgatatcttcaaaatcactcttgaaaccgacgaagat
atggtcacagagattaaactgaagtacttcgatacggtgcccgtggcggcgagtatgtgc
gttctaaagacaggattcctgtttgtcgcctcggaatttggcaatcattacttgtatcag
atagctcatcttggagatgacgacgatgaacctgaattcagctcggcgatgccgttggaa
gagggtgatactttcttctttgccccacggccacttcgaaatctagtgctggtcgatgaa
atggatagtctttcgcctataatggcatgccaggtagcagatttggcaaatgaagatacg
ccgcagttgtacatcgcctgcggtcgaggaccacggtccacattacgagtattacgtcac
ggtctcgaagtctctgaaatggccgtgagcgaactgcctggtaacccaaacgctgtatgg
actgtaaaaagaagagttgatgaggaatatgatgcatacatcatagtgtccttcgtgaat
gccaccctcgtactcagtatcggcgagactgtcgaggaagtgacagattcaggtttcctc
ggtacaacaccgactttaagttgctctgccttgggcgaggacgccttagttcaggtatat
cccgatggtatacgtcatatacgagcagataagcgtgtcaacgaatggaaagcacctggc
aagaagactatcgtgaaatgtgcggtcaatcaacgtcaagtggtgattgccctcactgga
ggagaactagtttacttcgaaatggaccctactggacaattaaatgaatacacagagagg
aaaaagatgccttctgaagtaatgtgtatggctctcggaaatgtagcaataggcgagcaa
cgctcctggtttctggctgtcggtttacaagataatacagtgagaataatatcgttagat
ccatcggattgcctcgctccgagaagtatgcaggcgttaccagcagctgcagaaagttta
tgcattgtggaaatgggagctaaggaggctgacaattcggaggacgcagccccacagcaa
tctagtttatacctgaatataggtttgcagaatggcgtgctgcttaggactgtattagat
ccaatttccggtgatctcgcagatacaagaacgcgctatctgggttctcgtcctgtaaag
ctattcagaatacggatgcagggaaatcaagcagtgttggcgatgagtagtcgatcttgg
ctcagttattatcaccagaatcgttttcatctaactccactttcatatgaaagtcttgaa
tttgcatccggcttcagttcggaacaatgtccggagggtatcgttgctatatcgacaaac
acattgaggattcttgcgcttgagaaactcggcgctgtgttcaatcaagtgagcttccct
ctagaatacacgccgagaaaattcgcgattcatgccgattccgcccatctaattgttatt
gagacggaacacaatgcttatacggatgagacgaaacagcagagaaggttacaaatggct
gaggaaatgcaagaagcagccggtgccgaggaagctgccgttgctcgcgaattggcagag
gcgttcttaacagaggagacaaacgaagcagtttttggtgctccgcgggcgggtcctgga
ttatgggcttctttattgagaataatggcaccgactactggagaaacgtttgaagctcat
cgctttgaacaaaatctggctgcattatgtctttgtctagtaaaatttgccaatcaaggc
gatcagctgtttctcattgtcggagttgcaaaggaatttcaattgaaccccagagttagc
aatggcggttttctttatacatacaaagtaaatgcgacttgtactagtatcgagctcttg
cacaaatccccgttggacgaagtaccattagccatttgtccatatcagggccgagtactg
gttggtgtaggtaggatgttacgactttatgacatgggtaaaaagaaattattacgtaag
tgcgagaataaacacatacccaacgccgttgtgtcgatcaatgcgatcggtcaacggatt
tacgtgagcgatgtacaagaatccgtatacgccgtacggtataagcgccaagaaaatcaa
ttgatcgttttcgcggacgacacgcatcccaggtggatcacaacgacgtgtgtgttggat
tacgataccgtcgccactgctgataaattcgggaacatagctgtggtaagttatcactct
gcctatatcagctatgtttaa
DBGET
integrated database retrieval system
