Pogonomyrmex barbatus (red harvester ant): 105426025
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Entry
105426025 CDS
T04903
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105426025
03015 mRNA surveillance pathway
105426025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105426025
03041 Spliceosome [BR:
pbar03041
]
105426025
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105426025
Spliceosome [BR:
pbar03041
]
Complex C
Other components
EJC/TREX
105426025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Viral_alk_exo
RSB_motif
Motif
Other DBs
NCBI-GeneID:
105426025
NCBI-ProteinID:
XP_011635389
UniProt:
A0A6I9WTY3
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
SPIFFRIPQKRLLQEDRRRIITEFVNNDLPGGKRRWQSSNVEPKTVFSRLSAHPSIADDS
ADEDDSITKPAVSSRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQE
ETKLKAKEDKKAEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQF
QDWRNAQLSLASFIKTHAQPSIYYVPKRKHPQTDILLAQCTKELYEEIEKREKALVEELN
LIEIQIGLNKHSQNNFEESASLHTVEAPRSIEEGEENRDPNPEHNIETTINDNTDISMQS
IINENFDDEHTTEKKEEIQLDQVQPDANNG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
agtccaatttttttcagaataccacaaaaacgattgctacaagaagatcgtcgaagaatt
ataacagaatttgtgaataatgatctacctggaggcaaacgacgttggcaaagttctaat
gtagaaccaaaaacagtttttagtcgattaagtgcacatccatctatcgcagatgatagt
gctgatgaagatgatagcattactaagcctgctgtatcatccagagtaatagccactcct
cgagaaattccttcgcgacaagaagttatccgacgagaaaggacagatgaacgcagtcga
caaagaaataaacgtatgtttggcgcacttttgggtactttacaaaagtttagacaggaa
gaaactaaactgaaagcaaaggaagataaaaaagcagaagtagaagctagagtagaagaa
gctagaagacgagaaaaagaagaattacgaagagaaagacaacaattgtttttgtcacgt
aaacgacaattagctgaagtacgagcactagaagcaaagcttgctcgtagtcgacaattt
caagattggcgcaatgcacaattatcccttgcttcgtttataaaaacacacgcacagcct
tctatttattatgtaccaaagcgaaaacatccacagacagacatattattagcgcagtgt
acaaaagaactttatgaggaaattgaaaaaagagaaaaagcattggttgaagaattaaat
ttaatagaaattcaaataggattgaacaaacattcacaaaacaattttgaagaatctgca
tctttacatactgtagaagctccacgttcaatagaggaaggtgaagaaaatcgagatccc
aatccagaacataatattgaaactacaattaatgataatactgatatttcaatgcaatcc
ataataaatgaaaattttgatgatgaacatactacagagaaaaaagaagaaatacaattg
gaccaagttcaaccagatgcaaacaatggctag
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