Pogonomyrmex barbatus (red harvester ant): 105426272
Help
Entry
105426272 CDS
T04903
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105426272
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbar01002
]
105426272
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105426272
03036 Chromosome and associated proteins [BR:
pbar03036
]
105426272
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105426272
Peptidases and inhibitors [BR:
pbar01002
]
Metallo peptidases
Family M67
105426272
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105426272
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105426272
BRISC complex
105426272
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
105426272
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105426272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
105426272
NCBI-ProteinID:
XP_011635729
UniProt:
A0A6I9W229
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MDNSPLRKVELQTDVYMVCLQHALSTENFEVMGLLIGNFACGVAKISAVIILRRLDKKKD
RVEISSEQLLKAAAEAERLTTELNQPMRVLGWYHSHPHITVCPSHVDVRTQATYQTMDHS
FVGLIFSVFSEGKESKEHEIFLNCFQSDNGEATEIPLEIVHTPEISDRCLRTMIDLSKIL
VQEEEDMAEACKDHPDILASIHNNAVRTRALVHITDIITKPLVQTFEKRIALNKLRSMHL
RRQLQELQKVYNG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggataactctccattgcggaaagtagaactgcaaacagatgtctatatggtatgtttg
caacatgccttatccactgagaacttcgaagtaatgggtttactcattggcaattttgct
tgtggggtagcaaaaatatcagctgttattattttacgtcgtctagacaaaaagaaagac
agagtagaaatttcatcggagcaattattgaaagctgccgccgaagccgagcgattaacg
acagaattaaatcaacctatgcgtgttcttggctggtatcattcacatccacatattaca
gtttgcccatcacacgttgatgtcagaactcaagctacctatcagacaatggatcacagt
ttcgtaggcttaatattctcagtattttcagaaggaaaagaatcaaaagaacatgaaatc
ttcttgaattgtttccaatcagataatggtgaagctacagagataccattagagatagta
cataccccagaaatttcagacagatgtttaagaacaatgatagacctatcaaaaattttg
gtacaagaagaggaagatatggctgaagcttgtaaagatcatccagatatcctcgctagt
attcataataatgctgtaaggacacgtgcattagttcatataacagatatcattacaaaa
cctttggtacaaacatttgaaaaaagaatagcattaaacaaattgcgtagcatgcatctc
cggagacaactacaagaattacaaaaagtatataatggataa
DBGET
integrated database retrieval system
