Pogonomyrmex barbatus (red harvester ant): 105426378
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Entry
105426378 CDS
T04903
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105426378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105426378
Membrane trafficking [BR:
pbar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105426378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
WD40_CDC20-Fz
Beta-prop_WDR5
ANAPC4_WD40
zf_RING_Vps8_fungal
zf-RING_Vps41
TPR_VPS8_2
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Prok-RING_1
Beta-prop_IP5PC_F
WDR55
Beta-prop_EML_2
VPS18_RING_C
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_THOC3
PQQ_2
Beta-prop_EML
Clathrin
Motif
Other DBs
NCBI-GeneID:
105426378
NCBI-ProteinID:
XP_011635884
UniProt:
A0A6I9WAM6
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MAENEFVSDGDECLVTEAINLDIEELDNMEYAIPIVEELPTLESILMEPDYESLSETEDD
IGIPLGEKLGSSETTSIGSHLSLNSLNKSSKATQRSSSGVILRHVILKGITSQIVSANER
VNAGLASAVAAGGNMLVIGTSHGLILGFDSSQTLRWCDQEARHQGSVSALCFNYDGSRVL
AGFVRGHILMLDSSNGKVLRILTDVHPLDTAVLHVKFTDSPKIALCSDSGGSVFELNFTR
VMGVRGCDSRCLFSGSKGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPRMR
VVLSHPLTGAPTAPPQLSWQLVVIQTADGSRVIDPVLALARDNVVYFYQVYTEIGTRIKL
SPLRRMTLPYMISNLRWLNPRALVVLDAQEKLHLLDVRAQDNLETLDMSRVGISYASSHF
KGLSTGGNVSKAMALAGERACYNTVVVFGTQLLLLGTKSLHVICMRTWTERLQHLIMQKR
FPEALALGLSFYQDKGKAVIGLRGSKQRRKQIARDKVCEVLVQYMDELNQCLVDENIDYD
MIVLTCVDYCIQLENLDLLFGKLWDIVFESEGLKTSYLHALEVPLLDGSLQPRLPPLIAQ
QLVTLYDQENKVDTLEAIVVLLNVDCLDIHQVTTICRQRGLWEALIYLQTTALGDFTAPI
HQLVPVLQNLLQDSIAALSRDCIKLGNAILVYTSCCLAGRGFPKDELPEDMRQKAKADIL
RALLSQHSSLANDMERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRHRQRLIDI
LLSIVMPSTPLTPKSIDYITIEQQFMVLTFVANEVSENTVTLESSTLNRMIDVLCIDSHV
ELLKDFKTERENAVLGLLNSKKLCNISDNTLLNLANRANFIRVAELLYSAREDWVEVCKC
MILEPSRHHDVWPWLEHLPAASLNQIVSVHASTLVTINANQFAIIIASRLQNKIDDTLRN
LNNSSLEYKLLGALYQVAQYKEEDISLELTTEHLERYLALMCELEPARVVAHLHGSHGCR
LDEALKIVQRWKCKDAEAVMLEKLGNYQDAFDLLLKEFEDRLEMYRQDKVSESETVHAAV
QLAGICRRSAGNVDWMPLVEAMFRPQSENNRQKMNKLSGKLLRLILESLSGTSILSNILE
QILRNPLATSGTMGDIRQLLSGVLTQSRYEQTLVETTARLVSLELHKALEKSLRDAGRGC
GNVSVTCPVCRQPLSHCSDHVVVFSCGHGYHSTCLGEPKSCYKCLNMKGWAPVVTNVTHA
VPQPPPRKKQLLPPEFLRHRDLTLRLAPSCSIPDLEGIF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgaatttgtatccgacggtgacgaatgtctcgttacggaggctattaat
ttagatatcgaggagttagataacatggaatatgccataccgatcgtggaagaattaccc
actttagaaagtatattgatggaacctgattatgagtcactgtcggaaactgaggatgac
attggtataccgttaggagagaaacttggtagcagcgagacaaccagcattggcagtcac
ctgtcactgaattcgttaaataaatcctccaaggctactcagagatcatcctcgggtgtt
atcttaaggcacgtcatactcaaaggaataacatcacaaattgtatcggccaatgagaga
gtcaacgctggtttggctagcgcagttgcagctggagggaatatgctggtgatcggaacc
agtcatggtttaatattgggttttgattcctcacaaacattgcgatggtgtgatcaggag
gcgagacatcagggttcagtctcggcactttgcttcaactatgatggcagcagagtgtta
gcaggttttgtcagaggacatatcttgatgttggatagcagtaatggaaaagttttgagg
attctcactgatgtacatccactcgacactgctgtattacatgttaagtttacagattca
ccgaaaatagccttgtgtagcgacagtggtgggtcggtgttcgaattaaatttcactaga
gtgatgggtgtacgaggttgcgacagtaggtgtttgttcagtggctcaaagggagaagtg
tgcaccctagagcctctattattgaatcacttgccatcacatccactgaagaattataca
ttagtggcaatggcaacattgtcgaaggtgattgtagtttgcataagaccgcgaatgcgc
gttgtattgagtcatccgttaactggtgccccgacagcaccgccccaactgtcttggcaa
ctggttgtcatacagacggctgacggatctcgtgtaatcgatccggtattggcgctcgcc
agggacaacgtggtctatttttatcaagtgtacaccgaaatcggtacgcggataaagctc
tctcctcttcggagaatgacactaccgtacatgataagcaatctgagatggttaaaccca
agagctcttgtggtattggatgctcaagaaaaattgcatttgttagacgtaagggcgcag
gataatttggagacgttagacatgagtcgcgttggtatttcttatgcctctagtcatttt
aagggattatctactggtggaaatgtttccaaggcgatggcgttggccggcgaacgggca
tgctacaacaccgttgtagtcttcggtacacaactgttattattaggtacaaagagttta
catgtgatatgtatgaggacatggactgaaagattgcagcatctgataatgcagaaacgc
ttccccgaagctttagcattgggtctttctttttatcaagataaaggcaaggcggttatc
ggtctacgaggttctaagcaacgtcgcaaacaaatagcgcgtgataaggtttgcgaagta
ttggtacaatatatggacgaattgaatcagtgtctcgtcgacgaaaatatagactacgat
atgatagtattaacttgcgtcgattactgcattcaactggaaaatctggatctgttgttc
ggaaagttgtgggacatagttttcgaatcggaaggattgaaaacaagttatttgcacgct
ctcgaagttcctctgctggacgggagtctacaaccgcgactgccgccattaatcgcccag
caattggtcactctttatgatcaagaaaacaaagtagatacgttggaggcgatcgtggtt
ctgctcaacgtggattgcttggatattcatcaagtaacaacaatttgtcgtcagcgagga
ttgtgggaggcattgatttacctccagacaacagccttgggcgattttacagcgcctatt
catcaattggtaccggtacttcaaaatttattacaagattcaatagccgccctttctcga
gattgtataaaactcggcaatgccattctggtttataccagttgctgtctcgctggtcgc
ggatttcccaaagacgagctacccgaagatatgaggcagaaagcaaaggcggacatattg
agagccctgttatctcagcattccagtttagcgaatgacatggagagacagtatccgtat
ttgaggacgctactgcaattcgacgcgaagggctttctcgatgttatagccatcgctttt
caagaaccagaatttacctccgagatgggccttcggcatcgacaaagactcatagatatt
ttgttgagcattgttatgccgagtacgccacttactccgaaaagtattgattatatcaca
attgaacaacagttcatggttctaacgttcgttgcgaacgaagtgtccgagaacacggtt
acgttagagtctagtacgttgaatagaatgatagatgtattgtgtatcgactcgcatgta
gaactgttgaaggattttaagactgaaagggaaaatgctgtgttgggattgctgaattct
aaaaagctgtgcaatatttctgataatactttgttaaatttagcgaatagagctaacttt
ataagagtcgcggagttgctgtacagtgcgcgagaggattgggtggaggtatgtaaatgt
atgatcctggagccatccaggcatcacgatgtgtggccttggctcgagcatctgccagct
gcttcgttgaaccaaatcgtatcggttcatgcttcaactctcgtgacgatcaacgccaat
cagttcgccataattattgcgtcacgattgcaaaacaagattgacgatacactacggaat
ctcaataattcgagcttggagtacaagttgctaggagcattgtatcaagtcgcgcagtac
aaagaggaggatatttctctggaattaacgactgagcatttagagagatatctagcgttg
atgtgtgaattggagccagcgcgcgtagttgctcacttgcacgggtcacacggatgtagg
ctagacgaggcattgaagattgtccagagatggaaatgcaaagatgcggaggcagtgatg
ctggagaaacttggcaattatcaggatgcgtttgatcttctgctaaaagagtttgaggat
cgattggagatgtatcggcaagacaaggtctcggaaagtgagacagtgcacgctgccgtg
caactcgctggaatatgccggagatcggcagggaatgttgattggatgcccctcgtagaa
gccatgttccgaccgcaatcggaaaataacaggcagaagatgaacaagttaagtggcaaa
ttgttgcgattgattttagagtctctgagtggcacgtcaatactgtcgaatatattagag
cagattctgaggaatcctttagcgaccagtggcacgatgggcgatatacgacaactattg
tctggagtcctcactcagtcacgatatgagcaaaccctagttgaaactaccgcgcgatta
gtgagcttggagcttcataaggctctggaaaaatccttgagggacgctggtagaggatgt
ggtaatgtttccgtgacttgccctgtgtgcagacagccattgtcgcattgctccgatcac
gtagtagtgttcagctgcggtcatggatatcattcgacgtgtctaggcgagcccaagtcg
tgttataaatgcttgaacatgaaaggatgggcgcccgtcgtcaccaacgttacgcacgcc
gtcccacaacctccgccgagaaagaaacagcttctcccgccggaattcctacgtcacaga
gacctcacgttaagactggcaccatcctgttctatccccgatctcgagggcatcttttaa
DBGET
integrated database retrieval system
