Pogonomyrmex barbatus (red harvester ant): 105426555
Help
Entry
105426555 CDS
T04903
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105426555
09123 Folding, sorting and degradation
03018 RNA degradation
105426555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105426555
03041 Spliceosome [BR:
pbar03041
]
105426555
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105426555
mRNA degradation factors
5'-3' decay
Lsm complex
105426555
Spliceosome [BR:
pbar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105426555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
BPL_C
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
105426555
NCBI-ProteinID:
XP_011636140
UniProt:
A0A6I9W771
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MATSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcggttagcacaaatccatctaccttattgcctctagaattagttgataaa
tgtattggttctcggatacacattatcatgaaaaatgacaaagaaattgtgggaactcta
caaggttttgacgactttgtaaacatgttgctggaagatgtaacggaaagcgaagcaacc
ccagaaggacgtagagttacaaaattggatcaaattcttcttaacggcagcaacatcact
atgttggtgcctggtggggagatgccggatacataa
DBGET
integrated database retrieval system
