Pogonomyrmex barbatus (red harvester ant): 105426589
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Entry
105426589 CDS
T04903
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105426589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbar03041
]
105426589
Spliceosome [BR:
pbar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105426589
Complex C
U5 SnRNP specific factors
105426589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
105426589
NCBI-ProteinID:
XP_011636188
UniProt:
A0A6I9W7B1
LinkDB
All DBs
Position
Unknown
AA seq
2299 aa
AA seq
DB search
KWQQLQSKRFAEKRKFGFVDAQKEDMPAEHIRKIIRDHGDMSSRKYRHDKRVYLGALKYM
PHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREK
RDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEEDESVASWFYEHKPLIG
TKHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDQNFFYLFDPKSFFTAKALNMAIPGG
PKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHAPN
VVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPQIEDDEDFVLPGEVQPFLQEIPLYTD
NTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVKVRVSYQKLLKYFVL
NALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNMLNLLIHRKNLNYL
HLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLAD
GLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRV
WLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDM
MPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHY
NRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIFTTSVHW
LESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHE
ALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLF
PPWVKPADTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKFEKLYEKIDLTLLNRL
LRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAQYYGLVLDLLVLGLQ
RASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRFSADEARDLIQRYLTE
HPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSTTTIQWENSFVS
VYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEITKERTAQCFLRVDDES
LQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQ
TRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSG
MSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQ
ALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDLCQV
FDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADSKDVMDNTT
TQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYG
NWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQI
IWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQL
AKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQAC
LKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVVLKP
DKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEI
SAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSNYETQTFSSKTEWRVR
AISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYGISPPDN
PQVKEIRCIVMAPQWGTHQIVHLPNTLPNHQYLKEMEPLGWIHTQPNELPQLSPQDISTH
ARIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNPKGYLPSHY
EKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPAHFLN
FSSLEDGEGVGADREDMFA
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
aaatggcagcagttgcaatcaaagcggttcgcagaaaagagaaagtttggctttgtagat
gctcagaaagaagatatgccagctgaacatataagaaagattattagagatcatggtgat
atgagtagtagaaagtatcgtcatgacaaacgtgtctacttaggagctttgaagtatatg
ccacatgctgttatgaaactgttagaaaatatgcctatgccttgggaacaaataagagat
gtaaaggttttatatcatattactggagctattacattcgtcaatgagattccttgggtt
atagaacctgtatatatagctcaatggggtactatgtggatcatgatgagacgagaaaaa
agagatcgtagacacttcaagagaatgagattcccaccttttgatgatgaggagcctcct
ctagattacgccgataacgttttggatgttgaaccattagaagctatacaaattgaactt
gattcagaagaagacgaatctgtggcatcatggttttatgaacacaagccattaatcgga
acaaaacatgttaatggatctacataccggagatggaatctaacactaccacaaatggcc
actttgtaccgtttggctaatcaattgttaaccgacttagtagatcagaacttcttttat
ctatttgatcccaagtcattctttactgcaaaagctttaaatatggcaatcccaggagga
ccgaaatttgaaccattggtaaaagattcgaatgctgctgacgaagattggaacgagttt
aatgacataaataaaatcatcattaggcaacctattagaacagaatatagaattgcgttt
ccttatttatataataatatgcctcattttgtgcatctttcatggtatcatgcaccaaat
gttgtatatataaagaccgaagatccagatttacctgcattctatttcgatccactgatc
aatccaatctctcatagaaattcactgaagacgatggagccacaaattgaggatgatgaa
gattttgttttgcctggtgaagtgcaaccattccttcaagagatacctctttataccgat
aatacagcgaatggaatagcacttttatgggcgccaaggccatttaacacacgttccggt
agaacgagaagggctattgatattccattggtcaaatcatggtacagagaacattgtccg
cccggacaacctgtaaaagtgcgagtcagttatcagaaattgctgaaatatttcgtattg
aacgctttgaagcataggccaccgaaaccgcagaagaaacgctatttattccgttcattc
aagtcaaccaagttcttccagacgacaacgatagattgggtagaagctggtctacaagta
tgtcgccaaggatataacatgttgaatctattaatacatcgaaaaaatctgaattatctt
catttggattacaattttaacttgaagcccgtcaagacgcttacgacgaaagagagaaag
aaatcgcgctttggtaacgctttccatctgtgtcgtgagattcttcggttgaccaaactc
attatcgattctcacgttcagtatcgattgaataatgtagatgcttttcagctcgctgat
ggactgcaatatattttcgcgcacgttggtcaattaaccggcatgtatcgttacaagtat
aaattaatgcgtcagattaggatgtgcaaagatttgaaacatttaatctattatcgcttc
aacaccgggccagttggcaaaggaccaggttgtggattctgggcgcctggctggcgcgtc
tggttgttcttcatgagaggcattactccgctgttggagagatggctgggcaatttatta
tcaagacaattcgaaggtcgccattcgaaaggtgtggcgaaaacagtgacgaagcaacga
gtcgaatcgcactttgatctcgagttacgagcatccgttatgcatgacatagtcgatatg
atgcctgaaggaataaagcagaacaaagcgcggactattcttcaacatctgagcgaagcc
tggcgttgttggaaagcaaatatcccatggaaagtgccaggtctaccaattccaattgaa
aacatgatattgcgttatgtcaagatgaaagccgactggtggacgaatacagctcattat
aaccgagagagaattcgacgcggtgccacggtggataaaactgtctgtaagaaaaatctc
ggtcgtttgacacgtctctatctgaaggctgaacaagaacgacagcataattatttgaag
gatggtccatacatatcaccggaggaagccgtagccatatttactacttcggtacattgg
ctagaatctcgaagatttgcgccgatacctttcccgccgttatcttataaacatgacacg
aaactgctgatattggctttggaacgcctgaaagaagcctatagtgttaaatctagattg
aatcaaagtcaacgggaagagctaggtttgatagaacaagcatatgataatccgcatgaa
gcactatctagaattaaaagacatttgctcacacagagagcttttaaggaggttggcatc
gagtttatggatctttatagtcatttgattcctgtgtacgacgtagagccgctcgaaaaa
attacggatgcctatctcgatcagtatttgtggtatgaagcagacaagaggcgactattt
ccaccatgggtgaaaccggccgatacagaaccaccaccactccttgtctataagtggtgc
caaggtatcaataatctccaggatgtgtgggatgtcagtgagggcgagtgcaatgtattg
ctcgaatcgaaatttgaaaaattgtatgagaagatcgatcttacgttgctcaacagactg
ttgcgtttaatagtcgatcacaacatcgctgattacatgacagcgaaaaataatgttgtt
atcaattataaggatatgaatcatactaacagttatggcattattaggggattgcaattc
gcatcctttattgctcaatattatggactggtattggatctgcttgtactaggtcttcaa
cgagccagtgagatggccggtccgccgcaaatgccaaacgattttttaacattccaggat
gtcgcttccgagacagcacatccgatccgactgtattgtcggtatgtcgatagaatacat
ctatttctgcgcttctctgccgacgaagcgagagatcttattcagcgttatctcactgaa
catcctgatccaaacaatgagaacattgttggatataacaataaaaagtgctggccgcgg
gacgcccgtatgaggctgatgaaacacgacgtgaatctgggtcgcgccgttttttgggat
atcaagaatcgtttaccgcgttctaccaccactatccaatgggagaatagctttgtcagc
gtctatagcaaagacaatccgaatttgttatttaacatgagcggctttgaatgtagaatt
ctgcccaaatgtagaacaactcacgaggaatttacgcatcgagacggcgtctggaatctt
caaaacgagataacaaaggagagaacggcgcaatgctttttacgcgttgatgatgagagc
ttgcagcgtttccacaatcgtgtcagacaaatcttgatggcttcgggttcgactactttc
acaaaaattgtgaacaaatggaataccgcgttgatcggtttaatgacttatttcagagaa
gcggtggtaaatacgcaagaattattagatctgttggtcaagtgcgaaaataaaattcag
acacgtatcaaaatcggattgaactcgaaaatgccttcgcgttttccgcctgtcgtcttt
tacacacccaaggaattgggcggtctaggaatgctgtcgatgggtcatgttttgatacct
caatcagacttaagatggtcaaaacaaactgacgtagggattacgcattttcgttcgggt
atgagccatgacgaggatcaattgattccgaacttgtaccgttacatacaaccgtgggaa
tcagaatttatcgattctcaacgcgtttgggcagagtacgctttgaaacggcaagaggcc
aacgcccaaaatcgcaggctcactctagaagatctcgaagacagttgggatcgcggtatt
ccccgaataaacacgctattccagaaggaccgccatacattagcctatgacaagggctgg
cgtattcgtaccgagttcaaacaatatcaagtattgaaacagaatccgttttggtggact
catcaacgtcacgacggaaaactgtggaacctaaacaattacagaactgacatgatccag
gcgctcggaggtgtcgagggcattctggagcatactcttttcaaaggcacatattttccg
acatgggaaggtctattctgggaaaaggcatctggtttcgaggagtctatgaaatataag
aagctgacaaacgctcagcgttccggtctcaatcaaattcccaatcgtcgattcactctg
tggtggtcgcctaccattaatcgtgccaacgtttacgtcggttttcaagtgcagcttgat
ttgacgggaatattcatgcacggtaaaataccgactctaaagatttcgttgatccaaata
ttccgcgctcacttgtggcaaaaagtacacgaatctatcgtgatggatctctgtcaggta
tttgatcaggaactggacgcgctggaaatcgagactgtgcaaaaggagacgatacatccg
cgaaaatcttacaaaatgaactcttcgtgcgccgatattctgttgttctctgcttacaag
tggaacgtgtctcgaccatctcttctcgctgattccaaggatgtgatggataacacaact
acgcaaaagtattggatcgatgttcaattgagatggggcgattatgactcacatgacatc
gagcgatacgctcgtgcaaaattcctagactacacaacggataacatgtctatctatccg
tcacccaccggtcttctcatagccatcgatctggcgtacaatttgcatagtgcctatggt
aactggttccctggctgcaaaccactcatacaacaagccatggcgaagatcatgaaggcg
aatcctgccttgtatgtgttacgcgaacgtatccgcaaggcattgcaattgtactcgtcc
gaaccgacggagccttacctctcttcacaaaactacggcgaactcttctccaatcaaatc
atatggttcgtcgacgatacaaacgtatatcgtgtgacaattcacaaaacttttgagggc
aatttaacaacgaaaccgatcaacggtgcaatcttcatcttcaatccgcgcacaggacaa
ctctttctgaagattattcacacctctgtctgggcgggccaaaagcgtttaggtcagctg
gccaagtggaagaccgccgaggaagttgccgcattgattcgctctctgccagtagaagaa
caaccgaaacagattatcgtcactagaaagggaatgttagatccattggaagtgcacttg
ctagatttccccaacattgtcatcaaaggctccgagttgcaattaccgtttcaggcgtgt
cttaaagtggagaagtttggtgatctgattttaaaagcgaccgagccgcaaatggtattg
tttaatctttatgatgactggttaaagaccatttcgtcttacactgcattctcgcggctg
attctaattctgcgcgctctacacgtcaataccgagagaactaaagtcgttcttaaacca
gacaaaactaccatcaccgaaccgcatcatatatggccgtcgttgacggatgacgaatgg
attaaagtggaagtgcagctgaaggatctgatattggcggattacggcaagaagaacaac
gtcaatgtcgcgtcgctcactcaatctgagattcgtgatattattctgggtatggaaatc
agcgcaccatctgcgcaacgacagcagattgctgaaattgagaagcagaccaaggaacaa
agtcaattgaccgctaccaccacgcgaacggtgaataagcatggtgacgagatcatcacc
gcaaccacgtccaactacgagacgcagactttcagctcgaagaccgagtggcgagtacgt
gctatttctgcgactaaccttcatctcagaacgaatcacatctacgtctcatctgacgat
atcaaagagaccggctacacttacattcttcctaagaatgtgttaaagaaatttgtcaca
atctctgatctgcgagcgcagatcgctggttatttatatggcatcagtccgcctgacaat
cctcaggtgaaagaaattagatgtattgtaatggcaccacaatggggaactcatcaaatc
gttcatttgccaaatacactacctaaccatcagtatttgaaggagatggagccgctagga
tggatacacacgcaacctaatgagttgccgcaactctcaccgcaggacatatccactcac
gcccggattatggcggaaaattccatctgggatggcgagaagactatcgttatcacttgc
agtttcacgcccggctcctgctccctcacagcatacaagttaactccgagtggttttgaa
tggggtaaacagaatactgacaaaggcaacaatcctaagggttacttaccgagccattac
gaaaaagtacaaatgcttctgtctgaccgttttcttggcttttttatggtgcccagtcaa
ggttcgtggaattacaactttatgggtgtcagacacgatcctaatatgaagtatgagtta
caactcgcaaatccaaaggaattctatcacgaagtgcacagaccggcccacttcctcaac
ttctcaagtttggaagacggtgaaggcgtcggagctgatcgagaagacatgtttgcgtaa
DBGET
integrated database retrieval system
