Pogonomyrmex barbatus (red harvester ant): 105426729
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Entry
105426729 CDS
T04903
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105426729
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
105426729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
DUF6739
Motif
Other DBs
NCBI-GeneID:
105426729
NCBI-ProteinID:
XP_011636407
UniProt:
A0A6I9WWW2
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MSGESQITSIVNDILKVEAIEEAFSCVLVHNPKKESEKVTAWYHELRTAVTGLTKEQQEA
AVRQFLSMAAAMTNHRRLQLLLSLLEKLVHSNYLPARLVCECILSCDKLQYQLEDFWIEC
FVLIRHIIGGVDYKGVRDIMKGCKEKAQTIPARLDASVQPQLKALENVIEYIFDRNACLL
PGYFIVNQIQKTYPDSKNWPHWKLAKLLSNFVESFRNTAQMVSIVGHSKMLPVVEHTGYA
DHLINPWLLDPNTLKFSLKGNLPYDPDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHK
QRCIVLEEQLVELVILAMERSENESLPAEGMDGTVANHWVWLHLSSQLIYFILFQFACFP
SIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLP
VPDYTQALCTHQMAITCIWIHLLKKAQNEPGTNIHRPIPHTLKVHHEFLQHLVMPNASLC
MGSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKNQQQQPLQTLQNNAALANGPTTP
LSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIK
GFISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLH
LCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGA
ESLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFFQQNSVAKENKQQIKKAVEEEY
RNWASMNNENDIIAHFSVPGTPPLFLCLLWKMILETDRISPIAYKILERIGARALSAHLR
KFCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGNEAQVCFF
IIQLLLLKAAEFRNRVQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQTSGG
PSQYQSLPVYFGNVCLRFLPVFDIVVHRYLEIPPVIKSLEILLEHLGCLYKFHDRPVTYL
YNTLHYYEKKLRDRPLLKRRLVSAVLGSLREIRAPGWALSEAYQIYMTRFNDDAISWVPE
LEYYIRLVQRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMALPVAPDVVANFL
LDVVAKGYTVVPSDDIHLWINCVGLLLAALPECYWSALHKRLLETISSPGLINWQYNNLT
PFQMFNFNITHNSLLENKYSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPVITSEEQLI
YACHLIGPTLARFNAERPHCVVELAVCLYEMLERVDHAQTTLNYMDPICDLLYHIKYMFV
GDMMKNEVECIIRRLRPALQMRLRFIAHINIEEIHTS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaaagtcagattacgagtatcgtaaatgacattctgaaagtagaagcgata
gaggaagccttcagttgtgttcttgttcataatcctaaaaaagaaagtgaaaaagtaacg
gcatggtatcacgagctaagaacagctgtgactggattgacgaaagagcaacaagaagct
gcagttcgacaatttctatcaatggcagcagctatgacaaatcacagacggttacaattg
ctgctgtcattactggagaaattggttcattcaaattatttacctgctagattagtatgc
gaatgtattctgagctgcgacaaattgcagtatcagttggaagatttttggatcgagtgc
tttgttctcattcgacatatcattggtggagttgactataaaggagttagagatattatg
aaaggatgcaaagaaaaggctcaaaccataccagctcgattagatgcatcagtacaacca
caactaaaagctttggaaaatgttatcgaatatattttcgatagaaatgcatgcttattg
ccaggttatttcattgtcaaccaaatacaaaagacttatcccgacagcaagaattggcct
cattggaaattggcaaagctgctttcaaattttgttgaaagttttcgaaataccgcgcaa
atggtatctatagtaggacattcaaagatgctaccagtagttgaacatacaggatatgca
gatcatttgattaatccttggttactggatcctaatacattgaaattttcattaaaagga
aatctaccctatgatccggatttacttaagcctcagacagaattgctcagatatgtactg
gagcagccatatagcagagacatggtctgttcaatgcttggcttgcagaaacagcacaaa
caacgatgcattgtcttggaagaacagttggtggaattggttattctcgcgatggagcga
tctgagaatgaatctttgccagcggaaggcatggatggaacagtggccaatcattgggtg
tggttgcatctgtcttcgcaacttatttattttattctctttcaattcgcctgtttcccg
agtatcgttatggcgatacatgataaattagccggcagagaattgaggaagggtagagat
catctgatgtgggttcttttacaatttatctctggcagcattcagcggaatccgctgtcg
aatttcttacccgtattgaaattgtatgatctcctctatccagagaaagaacctctgcct
gttccggattatactcaagcactatgcacacatcagatggcgataacgtgcatatggata
catctacttaagaaagctcagaacgagcccggcactaacattcaccgaccgataccgcat
acgctaaaagtgcatcatgagtttttacaacatctagtcatgccgaatgcttctttatgt
atgggttcggattatcgcattgcgctcttatgcaatgcgtactcgacgaaccaggagtac
ttcagcagaccgatggcagcgctggtggataccatcctaggtacgcaaaagaatcagcaa
cagcaacctctgcagactctgcagaacaatgcggcgctagctaacggcccaacaacgccg
ctttcaatgtccattctagattctttaaccgtacactctaagatgagtcttattcacagc
attgtcacgcacgtaatcaaattggcgcagtccaagagcaacatggcattggcaccagca
ctagttgaaacttatagcagattacttgtatacacggagattgagagtctcggtatcaaa
ggatttatcagtcaattgttgccgacggtatttaagtcacatgcctggggaacgctttac
acattgctggagatgttcagctacagaatgcatcatatccaaccgcattacagagtgcag
ctactgtcgcatctgcacagtctcgcggcggtgccgcaaaccaatcaaacccagcttcat
ttgtgcgtcgagagcactgccctgcgacttatcactggactgggctcggcagaggtacag
ccgcaattgtctagatttctgtcggaaccgaaaactctcgtgtctgcggaatcggaggaa
cttaacagagcgttagtgctaacgttggcacggtccatgcatgtaaccggcaccggtgcc
gaaagtctcagcggcacgtggtgcaaggaattattgaacaccatcatgcaaaacacaccg
cattcctgggccaatcacactctccagtgcttcccgccggtgttgagcgaattcttccag
cagaacagcgtggcgaaggaaaacaagcagcagatcaagaaagcggttgaggaagaatac
aggaattgggcatctatgaacaacgagaatgacatcatcgcgcatttctctgtacccggc
acgccgccgttgttcctgtgccttctatggaagatgatactggagaccgatcgcatcagc
cctatcgcgtacaaaattctcgaaagaatcggtgcccgagcgctgtcggcacatcttagg
aaattttgcgattatctagtatttgaattcgccaatagcgttggcggtcagcacgttaat
aaatgcgtggacaccattaatgatatgatctggaagtataatatagtgactatcgacaga
ttggtgctttgtctggcattgaggacccaagaaggcaacgaggctcaagtatgctttttc
atcatacagttgttgctacttaaagcagcagagttcagaaatcgtgtacaagaatttgtc
aaagagaactcgccggaacattggaagcaatcaaactggcacgagaaacatcttgcgttc
cacaggaagttcccggagaagtttgcaccggagggtatcatggagcagactagcggcggg
cccagtcagtatcaaagcttgcccgtgtatttcgggaacgtgtgccttcgcttcttaccg
gtcttcgacatcgtagtgcaccgctatctggagataccgcctgttatcaagagtttagaa
atactattagaacatttgggttgtttgtacaaatttcatgatcgacccgtcacgtatctt
tacaatactctacattactatgaaaagaaattgcgagatcggccgttgttgaaacgtcga
ttggtatccgccgtcttgggatcattacgagaaatcagagcgccaggatgggcactttcc
gaggcttatcaaatatatatgacacgtttcaatgacgatgcaatttcgtgggtaccggaa
ttggagtattatatacgccttgtgcaaagaattgtagaaacaatgtctggtacggctcac
tttcctgctaccgattggagattcaacgaattcccaaatccagcggcgcacgcattatat
gtgacctgcgttgagcttatggctcttccagtcgctccagatgtagtagctaatttttta
ttggacgttgtcgctaaagggtacactgttgtgccatcagatgacatacatttgtggata
aattgcgttggtttactactggcagcattaccagaatgttattggtcagcgttgcataaa
cgtttactagaaactatcagcagccctggcctaatcaattggcaatataataacctgaca
ccattccaaatgtttaattttaatattacacataatagcctgttagaaaacaaatatagt
tacatgcttgcattggcacattcagtgtggcaccatgcgggtgtagggcagattacaaca
atgcctcaatttatcaaagaaaaacttcagccggtgataaccagcgaagaacaactaata
tatgcttgccatttgatcggtcccacattggcgagatttaatgcagagcggccgcattgc
gtagttgaacttgcagtctgtctgtatgagatgctggaacgagttgatcacgctcaaaca
actttgaattatatggatccaatttgcgatttattatatcacatcaagtacatgttcgtc
ggcgacatgatgaaaaatgaggtagaatgcatcatacgaaggttaagacccgcgttgcaa
atgaggctgcgtttcatcgctcacataaacattgaagaaatccatacgtcttaa
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