Pogonomyrmex barbatus (red harvester ant): 105427016
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Entry
105427016 CDS
T04903
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105427016
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105427016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105427016
NCBI-ProteinID:
XP_011636836
UniProt:
A0A6I9W8P8
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MPTTATTASSSRSDQCRKEDHPPPASDEEADGRVRFRAGSLRRRRRRLRQTCGDGVDAAV
AHPSECSALSYVLARQIDDKVDYCRTLVNARFENSENLYRKDLLSHYGCVNAIEFSNQGD
LLVSGGDDRRVLLWRVEQAIQGMGKPTVMKSQHVSNIFCLGYDSSKTKIFSAGNDDQVIV
HDLRTGESLNIFLHEKPVYGLSIHPHNDDVFASACDDGRVLIYDIRSNSAMETLAQYKSA
FHSVMFNPADPRMLATANAKEGVSMWDIRKPLEPVLCYGSPQQSCMNVRFNSMGNRLLAL
RRRLPPVLYAVESPTYLCEFDHPGYYNSCTMKSCCFAGENDEYVLSGSDDFNLYMWKIPP
MEGKAWVESAHMVLRGHRSIVNQVRYNQASCIFASSGVEKIIKIWSPFPLGTGCLGGLKR
DAGKRERQRRVFTHDEYIGLVLRSGQFMTHDYSHQSTKEDPRMMAFFDSLVQREIEGWSS
EDVPTPHTPSDSEINPATGEPYSATEGDDTTASEGGVAPERPLESPNRITRLIANRREKL
MRMAAMERSASDSASEGDNTHTRRRSKSKSKSKSVKRKHTRLSGRRRLSARRKCTVLKVN
SDSDSDDERPVDAAQPSTSSGVIFRRSRYVASAIEKDDKSSSYSSSSSSCVYEDIVAISK
RKHSKTDSDTSVKTHKRKHRKCKNSSRHDSSGKSQSKRQKLDDDSEEEEKTSSRNCVNGN
TSKDISNCREDGPSTPSSKSLQVPCTPDSGIKSGISSTEGKNSERTRKERNNRGVDDSSD
EQKLKRLECFRKKVEELARRSYRNRSTAQSQAISTTSDSSD
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacggcgacgacggcgtcgtcatcgcgcagcgaccagtgccgaaaggaggat
catccaccgccagcctccgacgaggaggcggacggccgcgttcgattccgcgccggcagc
ctccggcgacgtcgtcgacggctgcggcagacgtgtggggatggcgtcgacgccgcggtc
gcccatccgtccgagtgcagcgcgctgtcgtatgtgcttgcgcgacagatcgacgacaaa
gtcgactattgccgtactctggttaatgccagattcgagaactccgagaacctctacagg
aaggatctgctgtctcactacggatgtgttaacgcgatcgagttttccaatcagggggat
ctgctcgtttccggcggtgatgatagaagagttttgttatggagagtggaacaggcgata
cagggcatgggcaagcccaccgtgatgaaatcgcaacatgttagcaatatattttgcctt
ggttatgatagcagcaagactaagatattctccgcaggaaacgatgatcaagtcatagtc
cacgatttgcgaacgggcgaatctctcaacatcttcttgcatgaaaaacctgtctatggg
ctgtctattcatccgcacaatgacgatgtctttgctagcgcctgtgacgatggaagagtt
ctcatttacgatatacgtagcaacagcgctatggaaactttggcacaatacaaaagcgcc
ttccactctgtcatgtttaatcccgccgaccccagaatgctcgctactgccaatgctaaa
gaaggtgttagtatgtgggacatacggaaaccattggagcctgtattgtgttatggaagc
ccgcaacaaagttgcatgaatgtcagatttaattcgatgggcaatcgattgctggcctta
cgaagaagactaccaccagttctttacgcagtcgagtctcccacatatttatgtgaattc
gatcacccaggatattataatagttgcactatgaaatcgtgctgtttcgccggcgagaac
gacgaatatgttctttctggttcagatgattttaatttgtacatgtggaaaattcctccc
atggaaggcaaggcttgggtagaatctgctcatatggtattacgtggtcatagatcgatt
gttaatcaagttcgatacaatcaagcaagctgcatctttgcatcgtctggcgttgagaaa
attatcaagatctggagcccgttcccgcttggaaccggatgtttaggaggattaaagaga
gacgccggtaaacgcgaaagacagcgtcgggtatttacacatgatgaatatataggactg
gttttacgtagcggacagttcatgacgcatgattatagtcaccaatcaactaaggaagac
ccgcgaatgatggccttttttgattctctcgtacagcgtgagatcgaaggctggagttcc
gaggatgtgccaacgccacatacgcctagcgattctgaaataaatccggcaacgggcgag
ccatacagcgcgacagaaggcgatgataccacagcatcagaaggtggtgtagctcctgaa
agaccgttagaatcgccaaatcgtataactcggcttatcgcaaatcgcagagagaaactc
atgcgaatggccgcgatggagcgatccgcctcggattccgctagtgagggagacaacact
cacacgagacgtagatccaaatcgaaatcgaagtcgaagagtgttaaaagaaaacatacc
agactttccggcagaagaagactatccgctagacgaaagtgcactgtgttaaaagtcaat
agtgattcagacagtgacgacgaacgaccagttgacgcagctcaacccagtactagttcc
ggggtgatcttccgaagatcgcgatacgtcgccagcgccatcgagaaagatgataagagt
tcgagttacagcagcagcagcagtagctgtgtttatgaagacattgtcgctatcagtaaa
cgaaaacattctaaaactgattcggatacgtccgtgaagacgcacaaacgtaagcatcga
aagtgcaaaaacagttctcgacacgatagttctggtaagagccaaagtaaacgacagaag
ctcgatgacgactcggaggaagaggagaaaactagctcgagaaattgtgtgaacggtaac
actagtaaggatattagtaactgtcgtgaagatggaccgtcgacgccaagcagcaaatca
cttcaagttccttgtacacctgacagcggtatcaaatcgggtatctcatccacagagggg
aagaatagcgaacgaacacgtaaggagcgaaacaatagaggcgtggacgatagttcagat
gagcaaaaactgaaacgtttagagtgtttccggaaaaaggtagaggagttggcgaggagg
agctatcgtaatcggtctacggctcagtctcaagcaatttcgaccacgagtgattcttcc
gattaa
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