Pogonomyrmex barbatus (red harvester ant): 105427091
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Entry
105427091 CDS
T04903
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
105427091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105427091
03041 Spliceosome [BR:
pbar03041
]
105427091
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105427091
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
105427091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
105427091
NCBI-ProteinID:
XP_011636965
UniProt:
A0A6I9WY99
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MADQENKDFSEDIAEQNFAEQNGEAENNGENNVTENNQESQEDRSAGANQDSLNDRKLFV
GGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSAGDHI
INNKKVDPKKAKARHGKIFVGGLSTELSDDDIKSFFSQFGTIVEMEMPFDKTKNQRKGFC
FITFESEQVVNELLKTSKQTINGKEVDVKKATPKPDGMISMRGGPGSRGSRGSRGGRGRG
FGQGGWGQGGYGGGYSGGYGQGGYGGGYDGYGYGDYYGGGGYGGYGGYDYSGYDGYGYGS
GNYDGGYSGGRGGARGKGGSGYGGKQRGGRQNQRHQPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaggaaaataaggatttcagcgaggatatcgcggagcagaacttcgcggaa
cagaatggcgaggccgagaacaacggcgagaacaatgtcacggaaaacaatcaggagtct
caggaagacaggtcggccggggctaaccaggattctctgaacgataggaaattatttgtc
ggtggtttaagctgggaaacgacagacaaggaattgcgagaacatttcagcgcatatggt
gatattgaaagtatcaatgtcaaaacagatccaaatacagggcgatcgagaggatttgcc
ttcattgtattcgctaaagctgaatctcttgacaagattatgtctgctggtgatcatatt
atcaacaataaaaaagttgatcctaaaaaagcaaaagccagacacggtaaaatatttgtc
ggtgggctttcgacagaactttccgatgatgacatcaagagtttcttttcacaatttgga
actatcgtcgaaatggagatgccatttgacaaaacaaaaaatcagaggaaaggattctgt
ttcattactttcgaatctgaacaagtggttaatgaactcttgaagacctcgaaacaaacg
ataaatggtaaagaagttgacgtgaagaaagcaacacctaagcccgacgggatgattagt
atgcgcggtggacccggtagtcgaggtagtcgtggcagcagaggtggtagaggccgagga
ttcggtcaaggcggatgggggcaaggtggttacggcggcggttacagcggtggctatggc
caaggaggatatggcggaggctatgatggatacggatacggagactattatggtggtggt
gggtacggaggttacggcggctacgactacagtggatacgatggatatggctatggcagt
ggtaattacgacggaggctacagtggcgggcgcggtggcgcacgcggtaaaggaggttca
ggctacggtggcaagcaaaggggtggtcgtcagaaccagaggcaccaaccttattaa
DBGET
integrated database retrieval system
