Pogonomyrmex barbatus (red harvester ant): 105427141
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Entry
105427141 CDS
T04903
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbar03041
]
105427141
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105427141
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105427141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
KH_1
MOEP19
KH_KhpA-B
ResIII
KH_2
CMS1
KH-I_KHDC4-BBP
Anti-RecBCD_p2
KH_N4BP1_2nd
VitK2_biosynth
Motif
Other DBs
NCBI-GeneID:
105427141
NCBI-ProteinID:
XP_011637060
UniProt:
A0A6I9WDC9
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MSGWESNRTSVRRYDRGYDHRRENRRERDSQFYRRSNRSFGDNWNNDSNTQNYHDNSYRK
NNENLDDANELVMYIDTNNIGRLIGRGGSKIKALQEESNAMINIDKQCAENGQTPVRLTG
TDEARQRAKSLIEELFDNVQENTEIAQRMKPEEKKEEIDWRNFDWGKANEEYEERQKQKW
ATLPPIIKNFYKEDSDVANMSKTKVAYIRKSNNNIEVKHVFENEGGSDEEIKIPNPIETF
EQAFQEYPDILKEIRKQGFEKPSPIQCQAWPILLNGQDLIGIAQTGTGKTLAFLLPALIH
IDGQVTPREERTGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKAQINTVT
KGVQIVIATPGRLNDLVQAGVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQT
VMTR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgggaaagtaatagaacgtcagtaaggagatatgatcgaggctatgatcac
agaagagaaaataggagggaaagagacagtcaattttatagacgttctaatagatcattt
ggagataattggaataatgattcaaatacacaaaactatcatgacaattcatatagaaag
aataatgaaaatttggacgatgcaaatgaacttgttatgtacattgataccaacaatatt
ggaagacttattggaagaggaggtagcaaaattaaagctctacaagaagaaagcaatgct
atgattaatattgacaaacagtgtgctgaaaatggacagactcctgtaaggctaaccggt
acggatgaagcgcgacaacgagctaaaagtttaatagaggaattatttgataatgtgcaa
gaaaatacagaaattgcgcaaagaatgaaacctgaggagaaaaaggaagaaattgattgg
cgcaatttcgattggggcaaggctaatgaagaatatgaggaacgtcagaagcaaaagtgg
gcaactttgcctccaattataaaaaatttttataaggaagattcagatgttgctaatatg
tcgaagacaaaagtagcttatattagaaaaagtaataataatatagaagttaagcatgtt
ttcgaaaatgaaggaggctccgatgaagaaataaaaataccaaatcctatcgaaactttc
gaacaagcttttcaggaatatccagatatccttaaagaaatacgaaaacaaggatttgaa
aaaccaagtcctatacaatgtcaagcatggcctattcttctgaatggtcaagatctcatt
ggaatagcgcaaactggaacaggtaaaactcttgcttttctactacctgccttgattcat
attgatggacaagtaactccacgtgaggagcgtactgggccaaatgtgctcgttatggca
ccgacaagagaattagcactacagattgaaaaagaagtaggaaagtattcttatcacggc
attaaagcggtatgtgtatatggtggtggaaatcgcaaggctcaaatcaatactgtaacg
aagggtgtgcagatagtaattgcaactcctggaagattaaacgacttggttcaagcaggt
gtattagatgtatcagctgtaacgtatcttatacttgacgaagcagatcgtatgctggac
atgggttttgaaccacaaattcgtaagactctcttgggtgtgcgaccagatagacaaact
gttatgacaaggtaa
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