Pogonomyrmex barbatus (red harvester ant): 105427168
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Entry
105427168 CDS
T04903
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105427168
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105427168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SMC_hinge
AAA_21
CENP-F_leu_zip
NET2A
TMP_3
RsgA_GTPase
BRE1
ABC_tran
Laminin_II
Crescentin
SF3a60_bindingd
PilJ
Motif
Other DBs
NCBI-GeneID:
105427168
NCBI-ProteinID:
XP_011637103
UniProt:
A0A6I9W687
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MENGTKTQRRRAVENPDEHQAKRSRCIEDNNEVQSKEYTAGKVKKIRLHNFMCHDALEIT
LNENVNFIVGRNGSGKSAILTALTVGLGARANVTSRGTSVKEFIKKGRSSTTIEIILINK
GDTAYKPEIYGDMITVVRTIGATSSYKIKNWRGEILSTKRDELDNIITMMNIQVDNPISV
LNQDVSRTFLITSRPDEKYNLFMKATLLDAIENNYKEALQICEQEYDKLKQYSAALSQVK
GEIYRLKENIHRLKEMDASREELNNLEMELYWSLAITEESKFHKLQENLKMYENNLKELQ
NVELSIGTKNEEIDIKIQEIEQKIQQAEEEIIDSNEAYNSAKQNYSIANEAYLNKQREWR
SATNKIKRLEDDINLLKKEIQKLENCNDEEHNKRKEMKERLSKLEEKLDEIEASLRTKQT
GLMHLESDKMRLMQEVQSTKNELENFNRRIDKIKRDLNAVEQQKDNALSVFGPNIPRLLK
RIEEEYRKNRFKEKPRGPIGAFIKMKDAAWAPAVENFLGARTLSSFCVDNHQDAKLLNSI
MKEIYNDNILQVICSKFFNQVHDVRHYCTQSPQYSNLLEAMVIEDSVVANCLIDQREIEC
ILLIPTNDEACIIMSDVTKVPKNCKQAFTLRGDIFYPDPNYRTYAGKCGIRAKYLQVSTM
EAMQTLKEELQVAENKKQEAIAAYNTIYEKVNRTNSELDNITAMARKLRATQSEYTHMIN
ELKDKIESNEGTSADLFRNEAVELEKKLAQENTAEKLLAQNMRELQKNVESLDTKIKRYR
DLRHNMHTVIDPLKDQIKELTQEKERHRQECLRATRKLKEIRQTIQCTTGELEIQERATK
KMVSDATKKCPRINTTRSVNEIKTQLNDLRDKIREIENKLGCLDELQQQLKEKEQKYGVN
IEFMSQLKQSFEKHIQRVKHRQNMFIQLRDLYSVRVQKSFTDVLSLRRYKGNIMINHANK
VLDLHVSAQNDKKMSNDTRSLSGGERSYSTVAFILALWDCIQLPFYFLDEFDVFMDKVNR
RVIMDILLDHARLHPQSQFAFLTPLDTSHILAEDYVTIHQLQPPERRGLS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggtacaaagactcaacggagaagagcggtggagaatccagacgaacaccag
gccaaacgatccagatgcattgaggataataatgaagtgcagagcaaagagtatacagct
gggaaggtgaaaaagattcgccttcataactttatgtgtcatgatgcattggaaataaca
ttaaatgaaaatgttaactttatcgtgggacgtaatggcagtggcaagagtgctatattg
acagcattgactgtaggtcttggtgcaagagcaaatgtaaccagcaggggaacttctgtt
aaagaatttataaaaaaaggtagaagctcaactaccatagaaataattttaattaataaa
ggagacactgcgtacaagcctgaaatttatggtgacatgattacggttgtacgtaccatt
ggagctacctcatcgtataagattaaaaattggagaggagaaattctgtctacaaaacga
gatgaattggataatattataacaatgatgaacatacaagttgataacccaatatccgtt
ttgaatcaggatgtttcaagaacatttctaattacctctaggccagatgaaaaatataat
ttattcatgaaggctactctcttagacgccattgagaataattataaggaagctctacag
atatgtgaacaagagtacgacaaattaaagcaatattctgcggccttgtcacaagtaaaa
ggagaaatatatagattgaaggaaaacatacatagattaaaggagatggatgcatcacga
gaagaattaaataatcttgaaatggaactttactggtctttagcgattacagaggaaagc
aagtttcataagttacaggaaaacttgaagatgtatgaaaataatttgaaggagcttcag
aatgtagaattatctataggaacaaagaatgaagaaattgatataaaaatccaagaaata
gagcaaaaaattcagcaagcagaagaggaaataatagatagcaacgaagcttataacagt
gcaaagcaaaattattcaattgcgaatgaggcataccttaataaacaacgtgaatggcgt
tctgcaacaaacaaaataaaacgattagaagatgatattaatttactgaaaaaggaaatt
caaaagttagaaaactgtaatgatgaagaacacaacaaaagaaaagagatgaaagaacgt
ctatcaaaattagaggaaaaattggatgaaattgaagcctcgttgcggactaagcaaact
ggattaatgcatttggagagtgataagatgcgacttatgcaagaggtacagtctactaaa
aatgaattagaaaattttaacagacgtatagataagatcaaaagagatttaaacgcagtc
gagcaacaaaaagataatgcacttagtgtatttgggccaaatattccgcgtttgttgaag
agaattgaagaggagtatagaaaaaatcgattcaaggaaaaaccacggggtcctatcggt
gcttttataaaaatgaaggatgcagcttgggctccagcagtagagaattttctaggtgct
cgcactcttagctcgttctgcgtcgataaccaccaagatgccaaattattgaacagtatt
atgaaggaaatctataatgataacattcttcaagtaatatgcagcaaattttttaaccaa
gtacacgatgttaggcattattgtacacaatccccacagtattctaatctcttagaagca
atggttatagaagattctgttgtagccaattgtttaatcgatcaacgtgaaattgaatgt
atacttcttataccaacaaatgacgaggcttgcataataatgtcagatgtgacaaaagtg
ccaaaaaattgcaaacaagcgtttacactacgtggcgacatattctatcccgatccaaat
tataggacttatgctggaaagtgtggtattcgcgctaaataccttcaagtttctactatg
gaagcgatgcaaacattaaaggaagaacttcaggtagcggaaaacaaaaaacaagaagcc
atcgcagcatataacactatatatgaaaaagtaaatcgtactaattccgaattagataat
ataactgcaatggcccgcaagcttagagctacacaaagcgaatatacgcatatgattaat
gaactgaaggacaaaattgaatcgaatgagggcacttctgctgatcttttccgaaacgaa
gccgtagaattggaaaagaagttagcgcaggaaaatactgcagagaagttgttagctcag
aacatgcgggaacttcagaagaatgttgaatctcttgataccaaaattaaacgttacaga
gatttgaggcacaatatgcacacagtgatcgatcctcttaaggatcaaataaaagaatta
acacaggagaaggaaagacatcgacaggaatgtttgcgtgctactagaaaattaaaggaa
attcgccaaactatacaatgtacaacaggtgaattggaaatacaagagagagctacaaag
aaaatggtttccgatgccactaaaaaatgccctaggataaacaccactagatcagtaaac
gaaatcaaaactcaattaaatgatttgagagataagattcgtgagatagagaacaaacta
ggttgtctagatgaattacaacaacaattgaaagagaaagagcaaaagtatggagtaaat
attgagtttatgtctcagttgaaacaaagttttgagaaacatattcaacgagtaaagcat
cgacagaatatgtttatccaattgagagacttgtacagtgttcgcgtgcaaaaatcattt
accgatgtgctttctttaagacgatataaaggaaatataatgattaatcacgcgaacaaa
gtgctggatttgcacgtaagtgcgcagaacgataaaaagatgagcaacgataccagatcg
ctttcaggaggcgaacgatcgtactcgaccgtcgcgtttatcttagctctttgggattgc
attcagctacccttttactttctcgatgaattcgatgtatttatggataaagtaaaccgg
cgggtgataatggatattcttctggatcacgccagattgcatccacaaagtcaatttgct
ttcctcacaccgttggatacgtcacacattcttgctgaggattacgtaacgattcaccaa
ttgcaaccacctgaaagaagaggcctgagttag
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