Pogonomyrmex barbatus (red harvester ant): 105427204
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Entry
105427204 CDS
T04903
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04140
Autophagy - animal
pbar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105427204
04148 Efferocytosis
105427204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105427204
Membrane trafficking [BR:
pbar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105427204
Hops complex
105427204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-RING-like
TPR_11
zf-RING_5
Pellino_RING
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
105427204
NCBI-ProteinID:
XP_011637161
UniProt:
A0A6I9WDL6
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MAFLEWRRFNFFDLKREVDEGKIAKAFGDAQIATATSGNGNLVFGDNTGNVHVINRSYEI
TTFRAYEMTLTLTQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKPDKQGNPTCVRISRAIP
SYRAVPPTALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDVNLSITGLAIRA
TGKQTHLFVATQNSVFLYNITVKDKEFKSTLDNMGCMRKCSVLAESMQDSHFMIGRNDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTTISAKPNTIEPIPPGVD
KHIITVLDIQNKFIVFSAPMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKK
NLYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEI
AIKVCRQASPEDALLLAQKHNKHEWYLRIQIEDKQEYKKALEYMATLEFEEAEANMKKYG
NILIENVPNESTQFLKALCTNYKPANKPLVDQEALNSYTEQRVDKASPEDFIHLFLNNSE
RLVEFLEHLVKSDTKWSTLIYNTLMEHYLHVWSALDNDVAKLQYEQKIVRLLQNSEARYD
KDQILILCHQHNFRKGLLFLYEESKLYQEILRFHLREGDSEQILATCKRFGHQDPNLWVQ
ALWSVAKNKDAPTKLLADILAYIAQEKLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTE
NEQTQADMELTEKYRADTLKLREQIEAIKNNTIIFQGSRCSACHHQLELPSVHFMCQHSY
HQHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEDPFSLVADYF
GRGVFKKLTVITDTDKSLPTPIKLEEPKLNYGPGAEARLRLNEGKSSLSGKMEGSRRTGY
DVPTLVMEERFRNFVKPDVYSSSLEANISGTGSGLSTPRGNSTKASPVPIREARILNSIT
PKSSPIEKTTFHSSKVPIVQSKPFETDDYDESKNPFANDVDDDDDDDANNPFKNDIDNDM
AGNDDDDYDRNLNPFGR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctggagtggaggcgctttaatttcttcgacttgaagagggaggtcgacgag
ggaaagatcgctaaggcgtttggagatgcacagattgcgacagctaccagtggcaatggt
aatctggtgtttggggacaacacaggcaatgtacatgtaataaacagatcgtatgagatc
acgactttccgggcttatgagatgacactgacgttgacgcagcaagtccaacattccact
tttctatttactatcggcgaggatgagcctggatgtaatcctactataaaggtttggaac
ttggccaagcctgataaacaaggtaatccaacatgcgttcgaataagcagagccatacct
agctatagagcagtccccccgacagctttatgtgtgcatactagtcttacattaatggct
atcgggtttggagatggttctattatgttgtatagaggcgatctaactcgagagagaaaa
aataaaataaaagtcttaaaggatgtcaatctgtctattaccggcctcgcgatacgagcg
actggcaaacagacgcacctgttcgtcgctacacagaatagcgtgttcttgtataatatt
actgttaaggacaaggaattcaaatctactttggataatatgggttgcatgcgaaaatgt
agtgtactcgccgagtctatgcaagacagtcacttcatgatcggacgtaatgacgctatt
tattgttatacaccagacggtaggggtccatgctatgcagtagagggtcaaaagataatg
ctggaatggttcaggacatatttggtgatagtggcaaaagaagcagcgaatgtaccaaga
acgacaacaactatatctgcaaaacccaatacgatagaaccaatacctcctggtgtcgat
aagcacatcattactgtgcttgatattcaaaataagttcattgtattctctgcgccgatg
gtgtctgtccaggcagttttgtccgagtggggtggatttttcatacttagtggagataat
aaactatatcatttagatgagaaagacttgcaatctaaattggcgttgctctttaaaaag
aatttatatgatgtctctataagaatagctaaaaatcagcaatatgatgcggaaggtctt
atagatattttccgtcaatatggagatcatttatattccaaaggggatcataacggtgct
atagagcaatatataaagactataggcaaattggaaccatcttatgtgataagaaaattc
ttggattcccaacatatcgataatttgacgacatatttgcaagcattgcataaaaatgga
caggcaacggaggatcatactactttgttactaaattgttatactaagcttaaccatact
gataaattgaaagagtttattatgacaaaagatcgtgaggtcgatttcgatgtggaaata
gcgataaaagtttgtcgccaagcgtcgccagaggatgctttattacttgcccagaaacat
aataaacatgagtggtatcttcgtattcaaattgaagacaaacaagaatataaaaaggct
ttagagtacatggcaacattagaatttgaagaggcagaagctaatatgaagaaatatgga
aatattttaatagaaaatgtgccaaatgaatccacacagtttctgaaagctttatgtaca
aattataaacctgccaacaaacctcttgtagatcaggaagctttaaatagctatacagag
cagcgtgttgataaagctagtccagaagattttattcacttatttctaaataattctgaa
cgactcgtagagtttttggagcatttagttaaatcagatacaaaatggagtacacttatt
tataatacattaatggaacattatttacatgtttggtcggctttagataacgacgtagct
aaactacaatatgaacagaaaattgtacgacttctgcagaattccgaagctcgttacgat
aaagaccagatattaatactctgtcatcagcataatttcagaaagggattactcttcctt
tacgaagagagtaaactatatcaagaaatattgagatttcatttacgcgaaggagatagc
gaacaaattctcgccacttgcaagagatttggtcatcaggatcctaatctttgggtacaa
gctttatggagcgtagctaaaaataaggatgcgccaacaaaacttcttgcggatatatta
gcttatatcgcacaagaaaaactattatctcccttgatggtcattgatgcaatttctaca
tccttgacttgtacattgggagacgttagaagttatttgtgcagtgtattacgaacggaa
aatgaacaaactcaagctgacatggaattaacggaaaaatacagggctgatactcttaaa
ttgcgggaacaaatagaagcaataaagaataatacgataatctttcaaggttcaagatgt
agcgcgtgccatcatcaattagaattaccatctgtgcatttcatgtgtcaacattcgtat
catcaacattgctttcaaagtttttcggagaatgagaacgaatgtccagcatgcttgcca
aacaacaagaaattattagatattataagagcacaagagcaatcaagagatctacatgaa
actttccacagtcttctcgatcgagcggaagacccattctccttagtagccgactatttt
ggtagaggcgtttttaagaaattaacagtaattactgatacagataaatcgttacctaca
ccgattaaattggaagagcctaagttaaattatggtccaggtgcggaagcgagactcagg
ttaaatgagggaaaaagttctctttcaggaaaaatggaaggatctcgacgaactggatat
gatgtccctacgttagtaatggaggaacgtttccgaaattttgttaagccagacgtatat
tcctcatcattagaggcaaatatatcgggaacgggaagcggtttatcgacgccacgtggt
aattccacaaaagcttcgccagtaccgatcagggaagctcgtattttgaatagtatcaca
ccaaaatcatcaccgatcgagaagacgacctttcactcatctaaagtccctattgtgcaa
tcgaaaccctttgagactgacgattatgatgaatctaaaaatcccttcgccaacgatgtc
gacgatgatgacgatgacgatgcaaataatccttttaaaaatgacattgataatgatatg
gctggcaacgatgatgacgattatgatagaaatctaaatccattcggtagataa
DBGET
integrated database retrieval system
