Pogonomyrmex barbatus (red harvester ant): 105427526
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Entry
105427526 CDS
T04903
Name
(RefSeq) muscle calcium channel subunit alpha-1 isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbar04040
]
105427526
Ion channels [BR:
pbar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105427526
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
105427526
NCBI-ProteinID:
XP_011637590
LinkDB
All DBs
Position
Unknown
AA seq
2093 aa
AA seq
DB search
MCISVVEWKPFEWLILMTIFANCVALAVYTPYPAGDSNLTNQYLEKIEYVFLVIFTVECV
MKIIAYGFVAHPGAYLRNGWNLLDFTIVVIGMISTVLTILMKEGFDVKALRAFRVLRPLR
LVSGVPSLQVVLNSILRAMVPLLHIALLVLFVIIIYAIIGLELFSGKMHRTCRHNITDEM
MDNPVPCGTGGYQCSRVGPDFHCSNRFWEGPNFGITNFDNFGLAMLTVFQCVTLEGWTDV
LYNIEDAMGSSWQWIYFISMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQ
QIEDDLRGYLDWITQAEDIEPETDEPKMQDGKIKQQNEIESTDQLEGDEEGIQQESVWKK
KKRDLERVNRRMRRACRKAVKSQVFYWLIIVLVFLNTGVLATEHYNQPHWLDRFQEITNM
FFIVLFSMEMMLKMYSLGFQGYFVSLFNRFDCFVVIGSITEMILTHSRVMPPLGVSVLRC
VRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFSD
SEEKTRHNFDSFWQSLLTVFQILTGEDWNAVMYVGIRAYGGVASIGVLACVYFIILFICG
NYILLNVFLAIAVDNLADAESLTAIEKEAEEEAEKNKSRSGSPTRDEVSGEAGDDGGEGT
GGEDEGAGTDLEHDPNETMEDYEAALDTETSEKSEDMNTHKVRLNVESDEEEEEVEDEWL
EKRREDEEEGETEPEEMPDDGQTVTARPRRMSEYNMATKKEPIPAGSAFFIFSNTNRFRV
FCHWFCNHSYFGNVILICIMISSAMLAAEDPLSTSSERNKMLSYFDYFFTIVFTIEICLK
MISYGFIIHEGAFCRSAFNLLDLLVVCSSLISMTVSSGAFSFIKVLRVLRVLRPLRAINR
AKGLKHVVQCVIVAVKTIGNIVLVTSLLQFVFAVIGVQLFKGKFFYCTDASKMTNATCQG
TYLEFEDGNINRPVVKQREWQQQRFHFDNVAKAMLTLFTVSTFEGWPSLLEWSIDSNQED
HGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIE
FALKAKPVRRYIPKHRIQYKVWWFVTSQPFEYTIFTLIMINTVTLAMKFYRQPEIYTDAL
DVLNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEVNPGSSIIS
INFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIIMLFFIYAVIGMQVFGK
IAIDDNTEINRNNNFQSFPQAVLILFRSATGEAWQEIMMACSAQPHVVKCDPMSDDFHKL
DTCGSDVAFPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEY
DPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA
VVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSPKLLDQVVPPPGVDDEVTVGKFYATFL
IQDYFRRFKKRKEQEMKDGDRDCHNTVTLQAGLRTLHEAGPELKRAISGNLEELLDDNPE
PMHRRNHSLFGSVWSSMRKGHHGFHRAKSLKVNSAAAKASPTNSIDFLPYASLRRTAITD
ATKQIANQLVPNIAGGLSDGAMNQMGTDLRLTGVEENIPLRPLAAFGNPAQQSTYKVVDL
QDGIERQLTPPTPPPRRNPPSSSTGTPSTGTAVHVPAATAAAATAATAATAAASAAAGTT
SGSSVATTTITASCTTSANTSTTATSSSPASSSNGTNCYYTYASRGCCVDCAVWSNHAVD
DCDDEDTTTGSGSSDSGRWNPHSEGGVVRGTTGKPHVTVLGGRSSKRRAKARRDAATAGG
KSAPASFRSRDAAAAAATTAGQPAGSATGTCTVANGLKMAQNQAIAVASFLADVDSRQWR
VCASCLSHRASYHGRERLSHSMPGSPADRKPNFEVIGSAESLVGRVLVEQGLGKYCDPDF
VRYTSREMQEALDMTREEMDQAAHQLLLQERRGQPLSYQLQQGAEQPQQQQQQLHPWSSQ
QQHQTTTGIGYQPLQEQPPSQPVYRQLHSSSYRRRSSNRQQQQQQQQQRQPPS
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcagcgtcgtcgagtggaaacccttcgagtggctcatccttatgacgatattt
gcaaactgcgtcgctctggccgtttacacgccgtatccagctggcgattccaatttgacc
aatcagtacttggagaagatagagtacgtttttcttgtgatttttacggtggagtgcgtg
atgaagatcatagcttacggcttcgtcgcgcatccaggagcttacctccgcaacggctgg
aacttgctggatttcacgatagtcgtgattggaatgataagcacggtgctgacgatactc
atgaaggagggctttgacgtcaaggccttaagggcgtttcgtgttctgcgtcctctcagg
ctggtttccggtgttccaagtcttcaagtggtcctaaactctattttgagggcgatggta
ccacttttgcacattgctttattagttctcttcgtcatcatcatttacgccatcatcggc
ctcgagctgttttccggaaagatgcacagaacgtgcaggcacaacataactgacgagatg
atggacaatccggtaccctgtggcacagggggctaccagtgctcgcgagtcggacccgac
ttccactgcagcaataggttctgggagggccccaacttcggcatcacgaatttcgacaac
ttcggactggccatgctcacggtcttccaatgcgtcaccctcgagggctggacggatgtg
ctttataacatcgaggatgcgatgggaagttcgtggcagtggatatacttcatttcgatg
gtcatccttggggctttcttcgtgatgaatctaattctcggtgtgttgtccggtgaattt
tccaaggagagagagaaggcgaaggcgcgtggtgactttcacaagcttagggagaaacag
cagattgaggacgatctcaggggttacctcgactggataacgcaggccgaggacatcgag
ccggaaaccgacgagccgaagatgcaagatggaaaaattaagcagcaaaacgaaatagag
agcacggaccaattggagggtgacgaggaaggaatccaacaggaatccgtttggaagaag
aagaaacgggacttggagagagtgaacaggcgaatgcgaagagcctgcagaaaggctgtg
aagtcccaggtcttctattggctcatcatagttctggtcttcttgaataccggtgttctc
gccacggagcactacaatcagccgcattggttggaccgctttcaagagatcacgaacatg
tttttcatcgtactgttctccatggagatgatgttaaaaatgtacagtttagggtttcag
ggttattttgtctcgttgttcaatcgtttcgattgcttcgtcgtgatcggctcgatcacc
gaaatgatacttacacattcacgtgtgatgccgcctcttggcgtttccgtactccgttgc
gtccggctgctcagggtattcaaagtaacaaaatattggagatcactgtcgaatttagtg
gcctctttactgaactcgatacaatcgatcgcctcactgttgctcctgcttttccttttc
attgtgatcttcgctcttctgggcatgcaggtcttcggtggaaagttcaatttcagtgac
agtgaggagaagacacgtcacaattttgacagtttctggcagagcttgctcaccgtgttt
cagatattaaccggcgaggactggaacgctgtgatgtacgtcgggattcgagcttacggc
ggcgtcgccagcatcggcgttctcgcctgcgtttatttcattatcctcttcatatgcggc
aattatatcctcttgaacgtgttcttggctatcgccgttgacaatctcgctgatgcggag
tccctgactgccatcgaaaaggaggccgaggaggaggcggaaaagaataagtctcgtagc
ggttcaccgacaagggacgaagtcagcggtgaagctggcgacgatggtggcgaggggacc
ggtggggaggacgagggtgccggcacagatctcgaacacgaccctaacgaaacaatggag
gactacgaggccgcactcgataccgaaacgtcggagaaaagtgaagatatgaatacgcac
aaagtgcgactcaacgttgagtccgacgaagaggaggaggaagtggaggatgagtggcta
gaaaagaggcgagaagacgaggaggaaggagaaactgagccagaggaaatgccagatgac
ggacagacagtgacagctagaccacgaagaatgtccgagtacaacatggccaccaaaaag
gaaccgatcccggccggttcggcattcttcattttttctaacacgaataggtttcgcgta
ttctgccattggttctgcaatcacagttacttcggcaacgtgatactgatctgcattatg
atttcctccgccatgttggccgccgaggatccactgtcaacttcctcggaaagaaataag
atgctgagctattttgactacttctttactattgtcttcacaatcgaaatctgcctcaaa
atgatttcatacggcttcattatccacgagggcgcattctgccggtcggcttttaatctg
ctcgatcttctcgtcgtttgctcctctctcatttccatgacagtcagcagcggcgcattc
tctttcatcaaagtgcttcgagtgcttcgcgtactgaggccgctgcgtgccatcaatcgc
gccaagggattaaagcacgtagtacagtgcgtcatcgtagcggtaaagactatcggaaac
atagtcctcgtcaccagcctcctgcagttcgtgttcgccgtcattggcgtacagctcttc
aagggcaagtttttctattgtaccgatgcatcgaaaatgacgaatgcgacgtgccagggt
acttatttggaattcgaggacggtaatattaacaggccggttgtaaaacagagagaatgg
cagcagcaacgttttcatttcgataacgttgctaaggcaatgttgactctcttcacggtc
tcgactttcgaaggttggccatcactgttagaatggtcaatcgactcgaaccaagaggat
catggaccaattcataactttcggccgatagtggccgcctactacatcatctacattatc
atcatcgcgttcttcatggtgaacatcttcgtcggtttcgttattgtcaccttccagaac
gagggagagcaagagtacaaaaattgcgagctcgataaaaatcagagaaattgcatcgag
tttgcgctaaaagctaagccagtgcgtcgatatataccaaagcatcgaatacagtacaaa
gtctggtggttcgtcacctcccaaccgttcgagtacacgatatttaccctaattatgatc
aataccgtgacgctcgcaatgaagttctatcgacaaccagagatatacacggacgccctg
gacgttctcaacatgatcttcaccgccgtgttcgcccttgagtttgtgttcaagctggcc
gcatttcgatttaagaattacttcggcgatgcgtggaatgtttttgactttattatcgtg
ctcggaagtttcatcgatatcgtttattcggaagttaaccctggatccagcatcatttcc
atcaatttcttcaggctgtttcgcgtaatgcgattggtcaagctactgagcagaggggaa
ggcattcgaacccttttatggacgtttatcaagtccttccaggctctgccctacgtcgcc
cttctcatcataatgctctttttcatttacgctgtgataggcatgcaggtcttcggaaag
atcgcgatagatgacaacacggagataaatcgcaacaataacttccagtcctttccgcaa
gccgtgttaattctgttcagatcggcgacaggtgaggcgtggcaagaaatcatgatggct
tgttcagcgcaaccgcacgtcgtcaaatgcgatcccatgagtgacgattttcacaagttg
gacacctgcggatcggacgttgcatttccctacttcatatctttctatgtgctctgctca
tttctcatcatcaaccttttcgtcgccgttatcatggacaacttcgattatttgacgaga
gattggtcgattctcgggccgcaccacttggacgagtttattcgcctgtggtccgagtac
gatcccgatgccaaggggcgcattaagcatctcgacgtggtaacgttactaagaaaaata
tcgccgccgttgggcttcggaaagttgtgtccccacagagtagcttgcaagagactcgtc
tcgatgaacatgccgctgaacagcgacggcaccgttttattcaacgcgactttgttcgcc
gtcgtgagaacgtcactgagaatcaagacggaaggcaacatcgacgacgcgaacgccgag
ctcagggcggtgatcaagaagatctggaagaggaccagcccgaagcttttggatcaagtc
gtaccaccgcccggagtggacgacgaggtgacggtcggcaagttttatgcgaccttcctc
atccaggattatttccgtcgattcaagaaacgcaaggaacaagaaatgaaggatggtgac
agagactgtcacaacactgtgacccttcaggctggattgagaacgttacacgaagctggc
cccgaattgaaacgcgcgatttctggtaatttggaagaactcctcgatgacaatccggaa
cctatgcacaggagaaatcactcgctctttggcagtgtgtggtccagcatgcgaaaaggg
caccacggttttcatagggcgaaatcgctgaaagttaattccgctgctgcaaaggcttcc
ccgaccaattccatagattttctaccatatgcctcgttacggaggaccgccatcacggat
gccactaaacaaatcgctaaccaacttgtgccaaatatagcaggaggtctgagcgacggc
gcgatgaaccagatgggaaccgatttgcggctgacgggcgtcgaggagaacataccccta
aggccgctcgctgctttcggcaatccggcgcagcagagcacgtacaaagtggtcgatctt
caggacggaatcgagcggcagttgacgccacccacgcctccgccgcgacggaatccaccg
tcctcgtccaccggcaccccgagcaccggcaccgccgtgcacgtccccgccgctacagcg
gcggcagcaacggcagccaccgcagcaaccgcagcagcatccgcggcggccggcacgacg
agcgggtcgagtgtcgcgacgacgacgatcaccgcgtcgtgcaccacgagcgcgaacacc
tcgaccaccgcgacgagctcaagccccgcttcctcgtcaaacggaacgaactgttattat
acctatgcgtcgcggggttgctgcgttgattgcgcagtctggagcaatcacgccgtagat
gattgtgacgacgaggacacgacaaccggaagcggatcgagcgattccggcaggtggaac
ccgcactcggagggtggcgtggtgcggggcacgacagggaaaccccatgtcaccgtgctg
ggcggccggtcgtcgaagcgccgggctaaggctcgtcgcgacgccgcgaccgccggcggc
aaatcggctccggcgagcttccggtcgcgggacgcagccgctgcggccgccacgacggcg
ggccagccggcgggatccgcgaccggtacgtgcaccgttgctaatggccttaaaatggca
cagaaccaggcgatcgccgtggccagcttcctcgccgacgtagactcgcggcaatggcgt
gtctgcgcctcctgcttgtcacaccgagcatcctaccacggcagagagcgcctgtcccac
agtatgcccggaagtcccgcggaccggaagccgaactttgaggtcatcggaagcgcggag
agcctcgtcggtcgggttctagtggagcaaggtctgggcaaatattgcgacccggacttc
gtgcggtacacatcgcgcgagatgcaggaagcgttggacatgacgcgagaggagatggac
caggccgcgcatcagttgctcctgcaagagcgacgcggccaaccgttgtcgtaccagctg
cagcagggcgcggagcagccgcagcaacagcagcaacagctgcacccgtggagcagccag
cagcaacatcagaccacgaccggcattggctatcagccgttgcaggagcagccaccgagt
cagccggtctaccgtcagctgcactcttccagctatcgtcgtcgcagcagtaatcggcag
cagcagcagcaacaacagcaacagcgacaaccgccgtcctag
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integrated database retrieval system
