Pogonomyrmex barbatus (red harvester ant): 105427592
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Entry
105427592 CDS
T04903
Name
(RefSeq) Fanconi anemia group J protein-like isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03440
Homologous recombination
pbar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105427592
03460 Fanconi anemia pathway
105427592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105427592
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105427592
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105427592
FA (Fanconi anemia) pathway
Downstream FA components
105427592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
105427592
NCBI-ProteinID:
XP_011637695
UniProt:
A0A6I9WEW4
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MIVEKDSLPIRKVRRRTRRQLTTRIIYMRIIENRVRRLVRRFKVGSIHQVSRAFYSMKKL
SLKRDHNKIKDTFDLIEVSDDDDSLSQDIQKCNNNSSNTRQHMDISSHKTLKISNSMTDA
SSPKYNSKHNISDDISSDEDVIVVDDVPDTSRRSQSMFNWDKPIFASASYSNIFFENNIS
SDSKFNKELSLESPNKRQKIIEDSISSDSDCNFDDKLISLNTFNKEPPLVEIQHSIMIAG
TNVKFPVKPYSCQIAVMNSLIVGCNREQNCLLESPTGSGKTLALLCGALAWQQQYSEKIC
QENCEKIDADSSCCDDDSLNDNFFLNSSQYFNKEWRDEISSKAKSRKVPKIFYGTRTHKQ
IEQVIREFKKTAYRHKRMTILSSRDHTCIQNTNRNKNDLCHELLDPLQVKKCEYYFNDTN
KKEPVFSQLNSPWDIEDLISFGKNKRLCPYFGARSLMVQADIVFCPYNYILYPEIRESMQ
INLRGNIVILDEAHNVEDICREAASVSLKDYELTNAAKECLHLLHKGRDHHVYDTIHRYL
MDFVKFLKNVDVKEDVNGFNNDMTSKHWPGIEFRVLLDIYNIGSLSFSNFYAASTVAIND
FGKNMKEEIRKEEMMLTISRETKKILEYLCYAMQSLASDSSVHDYRVYVIETIESTKKFA
FGDEWTSRGKVRTFKLICMNPAIVFKPLALSVRSIILASGTLTPTTSFQSELDTQFPHLV
NPQHIIPSDQVYVRCISQGPNGKFLNARYENMNTLNFQDELGELILKVCDAVPYGVLCFF
SSYKAMNTLHERWKNNGMWNKLSELKSIFVEPKDNKNLLAVMNQYRSVIEESSSKSFREA
CGAILFAVFRGKIAEGIDFSDNEARCVLAVGIPFSYKNNDIDLKMKYNDSNTSKGLLSGS
EWYVVNAFRALNQAIGRCVRHINDWGAVLLVDERFKESKNINYLPKWIRTNVSPNYHYNK
LNYIYSLYLYIFIIYIHIADKANL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggagaaagattccttaccgattaggaaagtgcggaggcggacacgcagacag
ctcactacgaggatcatttatatgcgcattattgaaaaccgagttcgacgactggttcgc
agatttaaggtaggcagcatccaccaggtgtcacgagcattttatagcatgaagaagttg
tctttgaagagagaccacaataaaataaaagacacttttgatttaatagaggtatcagac
gatgatgatagcttatcgcaggatatacaaaaatgtaataataatagtagtaatacaagg
cagcacatggatatatcaagccataaaacacttaaaatttcaaatagcatgacagatgct
tcgagtcctaaatataactcgaaacataatatatcagatgatataagcagtgatgaagat
gttattgttgttgatgacgttcctgatacttccagaagaagccaatcaatgtttaattgg
gataaaccaatttttgccagtgcttcgtattcaaatattttttttgaaaataatatctca
tctgattcaaaatttaacaaagagttgtctctagagtcaccaaacaagagacaaaaaata
atagaagactcgataagctctgactctgactgtaattttgatgacaaattgatatcccta
aacacttttaataaagaaccacctttggtggaaatacaacatagcataatgatagcaggg
actaatgtcaaatttcctgtcaagccatatagctgtcagatcgcagtgatgaacagtctc
attgtaggatgtaacagagagcagaattgtcttttggaaagtccaactggcagtggcaaa
accttggcacttctttgtggagctttagcatggcaacagcaatatagtgagaaaatctgt
caagaaaactgcgagaaaatagatgcagatagctcatgttgcgatgatgattctttaaat
gacaatttcttcctaaactcgtcacaatatttcaacaaagaatggcgcgatgaaatttcg
agcaaagccaaatcgcgcaaagtgccaaaaatattttacggaacgcgaactcacaagcaa
atcgaacaggttatcagagaattcaagaaaactgcgtatagacacaaaaggatgactata
ttgagcagtcgagatcacacatgtattcagaataccaataggaacaagaatgatttgtgt
cacgaactactggatccgctacaggttaaaaaatgtgagtattactttaatgacaccaat
aagaaagaaccggtatttagtcaattgaattcaccttgggatatcgaagatttgatctcg
tttggcaaaaacaaaaggctatgcccatattttggcgcaagatctttaatggttcaggcg
gatatcgtattttgtccttataattatatcctgtatccagaaattcgtgagagcatgcaa
atcaatctgagaggaaatatcgtaattctcgatgaagcccacaatgttgaagatatatgt
cgagaggctgctagtgtctctctcaaagattacgagcttacaaatgctgctaaagaatgt
ctacatcttttacacaaaggccgtgaccatcatgtttacgataccattcacagatattta
atggatttcgtaaaatttcttaaaaatgtcgatgtcaaggaagatgtgaacggttttaat
aatgatatgaccagtaaacattggcctggcattgaatttcgggttttgctcgacatatat
aacatcgggagtcttagcttttccaatttttatgccgccagtactgtggctataaatgat
tttgggaaaaatatgaaggaagagattcgtaaggaagaaatgatgctcactatttcacgt
gagactaagaaaattcttgagtatctctgttacgctatgcaatcgcttgcatcagacagt
tctgttcatgattacagagtatatgtcatagaaacgattgagtctactaagaaatttgca
ttcggtgatgagtggacttcgagaggcaaagtacgaacttttaagctaatatgtatgaat
cctgctatagtttttaaacctttggctcttagtgttcgttctataatacttgcttcgggt
actttgacaccaaccacatcatttcaaagtgaactcgacacgcaatttccacatttagtc
aatcctcaacatattataccttcagatcaagtgtacgtaagatgtatttcacaagggcca
aatggaaaatttttaaatgccagatatgagaatatgaatactttgaatttccaggacgag
cttggtgaattaattcttaaagtatgtgatgcagtaccatatggtgtattatgttttttt
tcgtcttataaggcaatgaacacgcttcacgaaagatggaagaataatggcatgtggaat
aaactctcagaattgaagtcaatttttgtggagccgaaagataataaaaatttgctcgca
gtcatgaatcaatatcgtagtgtcattgaggaatcatcatctaaatcatttcgagaagca
tgcggagctattttatttgcagttttcagaggcaagatagcggaaggaattgattttagt
gataacgaggctcgttgcgtattagcagtgggcatcccattttcttataaaaacaatgat
atagacttaaagatgaagtacaatgattcaaatacatctaaaggattattatctggtagt
gaatggtatgtcgtaaatgcatttagggcattaaatcaggcgataggtcgttgcgtcagg
catataaacgattggggtgctgtgctgctagtagatgaaagatttaaagagtcaaaaaac
attaattatttaccaaagtggattagaacaaatgtaagtcctaattatcattataataaa
ttaaactatatttacagtttatatttatatatatttataatttatattcatattgcagat
aaagcaaacttataa
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