Pogonomyrmex barbatus (red harvester ant): 105427702
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Entry
105427702 CDS
T04903
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105427702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105427702
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105427702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105427702
NCBI-ProteinID:
XP_011637905
UniProt:
A0A6I9W7Z9
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MPIDQKRINGPDISVPYDIYIHSEVKDNGIQPNAPKRHDGRSNNELRNIFMKTGIVSQAK
GSAYIEMGDTKVICSVFDPREIPNKTGYCVQGELFCEFKFAPFSHHKRKLHQQDAEEKEY
SLIMQRALEPAVCLQEFPNFQVDIYAIVLDNGGSALAAAIMAASLALANAGVPMFGLVTA
STIGICKQTYLVDPTDTEETFCSTKTEPDTADDHGIIMQAALPQHGQISEIFVVGSVDVN
TIEHSMDLLSKMHKDICPLLEQCLVKTVFKAFRPNNKKTDEK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgatcagaaacggattaacggtccggacatttctgtaccatacgacatttat
attcattccgaagtaaaagacaatgggatacaacctaatgctccaaaaagacacgatggc
cgctcgaataacgagcttagaaatatatttatgaaaacaggcatagtcagtcaggcaaaa
ggctcggcttatattgagatgggtgacaccaaagtcatttgctcggtatttgaccctcga
gagataccaaataaaactggctattgtgtgcaaggagaattattctgtgagtttaaattt
gcacctttttctcatcacaaacggaagctacatcaacaagatgcagaggagaaggaatat
agcctgataatgcaaagagctttagaaccagcagtatgtctacaagaatttcctaatttt
caagttgatatctatgcaatagttcttgacaatgggggatctgcattggctgcagcaata
atggcagctagtttggctttggccaacgctggagtaccaatgtttggtttagttacagca
tctaccattggcatatgcaaacaaacatatctagtggatccaacagacacagaagaaact
ttttgttctacaaaaactgaaccagacacagcagacgatcatggaatcataatgcaggct
gctcttccacaacatggccaaatttccgaaatattcgtagtaggaagtgtagatgtgaat
actattgaacattcaatggaccttttgagtaaaatgcacaaggatatctgtcctttgtta
gaacaatgtcttgtaaaaactgtatttaaagcatttcgtccgaacaacaaaaaaacagat
gagaaataa
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