Pogonomyrmex barbatus (red harvester ant): 105427845
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Entry
105427845 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105427845
Membrane trafficking [BR:
pbar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105427845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
105427845
NCBI-ProteinID:
XP_011638140
UniProt:
A0A6I9X1J5
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MDDRRVADYFVIAGLPGQDDELSEDNEANNKLEDWCQEGTHLKDMHMPPPITDLAVIFPA
LGEHCPEEYTLLEYTVSGFPADLNHGSLRTNECYLCYRRGRDKPPLVDIGVIYDGKERIM
QDAEMVLETPKGHVANVNNSTSKIFVTYRRASRKMPCNSLVVTDICVILTNKGESPPHAF
CVINKNLNKGMLGSDVFLCYKKSMNRANLVSFKPAILYKYPMVDYNSFVFPNSVAMFCLP
MGATIECWPKVACKPKPVFSTFVLTVADAAQKIYGSAITFYEELQMEPDTPNCKNNQEIM
DTVENNKNSDNMEITKDKPQVKMKMFKRTGILKKLSILELERLQYTDPASQSLNISKSIC
ILSHWPFFDTFEKFLVFLHRMVNNKPQNVPIEKYISYFLCDIPFPSPQRPRILVQLSSQD
RLILTQPEDLALPRSGASFRQLLINLGPDNCLLILLLILTEQKILVHSLRPDVLTSVSEA
IAMILFPFKWQCPYIPLCPLGLAEVLHAPLPFLIGVDSRFFDLYDPPSDVNCVNLDTNNI
AICDDKKYLNVKLLPKKAARQLRNWLEHLSSKIILWGKTSCSQKDRGDEDFSVDREFQQK
RKEQALELEIQDAFLRFMATILKGYRSYLLPITKAPTVGTTDPTSLFNIQAFLRSRDKAH
AKFYTMLVRTQMFIRFIEERSFVSDMDMAGLAFFDECTERVEEENVTLLELDESQHSERT
VFIPPPEAGTNQTPIIYKSFKLNPDLMRPQKNFCLKNPSLSAFGMVPGSPMARRTKHEIK
VAQRMARKQAAMPDRWGRCLLGTCHSLWFLHLPAMLQVSNQPAAILHQAYEVLVKMQKLR
LDPMEEVCYRAMMQLCGVYGQPVLAVKLLFHMKRSGVQPNALTYGFYNKAVLEATWPSDM
TNSSQLMWNKLRNVIVGAALFKKAGKKSAKRRLSSNVDFLTADKIECMEHALSRSSLDSS
HSQDTEAAHSDSTKGSSVSDLPGFGSFELKTKLLRQNSIVKDQTTLSMLQTDELEQTPSN
PRLTRSVESPLKSPIRTPVTENDPLGALINDETPIVSPSEENDSNCSTSTLTVLNNTTEE
RPGGPLLFRSNILPRSATFHQAVDESGMTVGGHLQRSETMPHSVAQQGEQEREKERLEIS
SLWSQNKDSVTSSLSSLGSSLKLSFGRYSTGGLAFAKNKDLISSNQLIESLSLSSYISPS
SLTGKKSNEIILGGLNSLKSAATTVVKKFDEIKEAISATSTPVKNKEREQKIAYGVSHES
LDSLTDGSIQDRNETSMRASGDGNLDLCSLYELAECLYPKGTRELEERLAIELVLSSASR
CHHPVNCAAILYDEEIMAGWQPEDSNLNTVCQYCDKATVPLLTVTILDYRCESSEKNNDP
LMGALVELLDQPKESLEPITVPYLNPLVLRKELESVLSQEGDACLTKHRFIQEHPIVYWN
LIWYFERINLTSHLPDLWLNNDKNSELQRTIGAVGVRTMWDNERLHMDRLPMYLQWKSNS
TEDRTLMQAVITYVRCNDLAEPIIRVALERSKHQTGDHPFSIYRDILFLAFTVLGRTNID
QGVFDREYSLSLEKFSENEEKLLHKIDAPPTMMSVYCKYYFKQLNV
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagaagggtagcggattattttgttatcgccggtctacctggtcaggatgat
gagctcagcgaggacaatgaagctaacaataagttggaggattggtgtcaggaaggcact
catctcaaggatatgcatatgccaccccctatcacggatcttgccgtaatattccctgca
ctgggagaacactgtccggaggaatatacactattagaatatactgtatccggtttccca
gcggacttgaatcatgggagtttacggacaaatgagtgttacttgtgctatagaagaggg
cgagataaacctccattggttgatattggtgtgatatatgatgggaaagaacgtataatg
caagatgctgaaatggtattagaaacccctaagggccatgtcgcaaatgtgaataattct
acttcgaaaatttttgtaacatatagacgagcgagtcgaaagatgccttgcaattccctt
gtggtcacagacatatgtgttatcttgacgaataaaggggaaagcccgccgcacgcattc
tgtgttattaataagaatctgaacaaggggatgctaggcagcgatgtgtttttgtgctac
aagaaatctatgaaccgcgctaatttagtatcgtttaaaccggcgatactctacaaatat
cccatggtggattacaacagtttcgtctttcctaattctgtcgccatgttttgtttaccg
atgggtgcgactatagaatgttggcctaaagtagcatgcaaaccgaaaccggtattctcg
acgttcgtcctaacggtcgccgatgctgctcaaaaaatatatggttcagcaataacgttt
tacgaggagcttcaaatggagcctgatactccaaattgcaaaaataatcaggaaatcatg
gacacagtcgagaataataaaaatagtgataatatggaaataactaaagataagccacaa
gtaaagatgaagatgtttaagagaactggtatactcaagaagctcagtatattagaattg
gaaagattgcagtatacagatcctgcaagccaatcactgaatattagtaaatctatatgc
atactgtctcactggccattctttgacacgttcgagaagtttttagtttttctacatcgc
atggtgaacaacaaaccgcagaatgtcccaatcgagaagtatatctcgtattttttatgt
gatataccgtttccgagtccgcaacgcccacgaatcttggtacagctcagtagtcaggat
agattgatcttgactcagccggaggatttagcgctgcccagatcaggcgcaagtttcagg
caattactgataaacttgggacctgataattgtttattgatattgttactaatattaacg
gaacagaaaatactggttcactctttacgcccggatgtgttaacttctgtgagcgaggct
attgctatgattctatttcctttcaaatggcaatgtccttacataccattgtgtccttta
ggattagcggaggtattgcatgcgccattgccatttctgatcggtgtggattcaaggttc
tttgatttatatgatcctccttctgatgtcaactgtgtaaatttggatacgaataacata
gcgatatgcgatgataaaaaatatttaaatgttaaattactacctaaaaaggcagccaga
caactcagaaattggttagagcatttgtcctccaagataattttgtggggaaaaactagt
tgttctcagaaagatagaggagatgaagactttagtgtggacagagaatttcaacaaaaa
cgaaaggagcaagctttagaactcgaaatacaggatgctttcttaagattcatggcaaca
attctcaaaggttaccgaagctatctgttaccgattacgaaagcaccaactgtaggaacg
acggatccgacaagtttatttaatattcaagcgtttttgagaagccgtgataaagcccat
gctaaattttacaccatgctcgtcagaacgcaaatgtttattagattcatagaagagaga
agtttcgtatctgatatggatatggcagggttagcgtttttcgatgagtgtacagaacga
gttgaggaggaaaatgtaactcttttggaactagatgaatctcaacacagtgaacgtaca
gtatttatacctccacctgaagcagggacaaatcaaacaccaataatatataaatcgttc
aaattgaatccggatctaatgaggcctcagaagaatttctgtttaaagaatccatcttta
agtgcctttggtatggtacctgggagtcctatggctcgtagaacaaagcatgaaatcaaa
gttgctcaaaggatggctcgaaaacaagctgcgatgccggatagatggggtagatgcctg
ctcggtacatgtcatagtctttggtttctgcatttaccagccatgttacaagtctctaac
caacctgctgcgattttacatcaggcttatgaagtattagtcaagatgcagaagttacgt
cttgatcctatggaagaagtatgctacagagctatgatgcaactttgtggcgtatatggg
caaccagttttagctgtaaagttattattccatatgaaacgcagtggcgttcaacctaac
gctttaacatacggattttacaataaggctgttctggaggcaacttggccttccgatatg
acaaactcaagtcagctaatgtggaacaaattacggaatgtcatcgttggtgcagctcta
tttaaaaaggctggaaaaaagagtgctaaaagacgattgagctctaatgtggacttttta
accgccgataagattgaatgcatggagcatgcgctttctcggtctagtctcgacagttcc
cattctcaagatactgaagctgcacatagtgattccactaaaggcagttctgtgtcggat
ctacccggattcggatcatttgaattaaaaactaagcttcttcggcagaatagtatagtg
aaagatcaaacaacgctaagtatgttacaaacggacgaattggaacaaacaccgagtaat
ccaaggctaacgcgcagtgtcgaatcgccattaaaaagtcccatacgcacaccagttacg
gaaaatgacccattgggtgctctcattaatgacgaaacaccgattgtgtcaccttccgag
gaaaatgattcaaattgctcaacaagtactttaacggttttaaataatacgactgaagag
agaccaggagggccgctcttatttagaagcaacatcctcccacgtagtgcgacgtttcat
caagcggtagatgaaagtggtatgacagtgggtgggcatctgcagaggagtgagacaatg
cctcactccgtggcgcaacaaggggaacaggagagagaaaaggagagactggaaataagc
agtctttggtctcagaataaagatagtgtaacatccagcctctctagcttaggatctagt
cttaaacttagttttggacgatactccacgggtggattggcgtttgctaaaaataaggat
ttaatatcatcaaatcaacttattgaatctcttagtctctccagctacatcagcccatca
agtttaacaggaaagaaatcgaacgaaataatactcggcggtctgaatagtttgaaatct
gctgcgacgacagtggtaaaaaaatttgacgaaataaaagaagccatctcggcgacaagc
acaccagtaaaaaataaggaacgcgaacaaaaaatagcatacggagtatcgcatgaatct
ttagattctctcaccgatggatctatacaagatcgaaatgagacttccatgagagcatca
ggtgatggaaatttagatttgtgttcattgtacgagctcgcggagtgtctgtatccaaag
ggtaccagagaattggaggaacgtcttgccattgagcttgtgctttctagtgccagtaga
tgccatcatcctgtaaattgcgctgccattctatacgatgaggagataatggctggttgg
cagccggaagattccaacttaaacactgtctgccagtattgtgacaaggctactgtacct
ctcctcacagttacaatattagattatagatgtgaatctagcgagaagaataatgatcct
ctcatgggagcattagtggaattgttagatcagccaaaggagtcgttggaaccgataacg
gtaccatatttgaatccattggttctaagaaaagaattggaaagcgtcctaagtcaagaa
ggggacgcatgtctcaccaagcacagatttattcaagaacatccgatagtatattggaat
ctgatatggtatttcgaaaggattaacttaacaagtcatctacctgatctttggttgaat
aatgataagaactcggaacttcagagaactataggagcggtgggtgttagaaccatgtgg
gataatgaacggttacacatggatcgtttgcctatgtatctccagtggaagtcaaattcc
acagaagacagaacattgatgcaagcagtgataacatatgtccgttgcaacgatttagca
gaacctataataagagtggccttagaaagaagtaaacatcaaacaggcgatcatccgttt
tctatatatagggatatactgttcctggcatttactgtattaggcagaacgaatatcgat
caaggcgtcttcgacagagaatacagtttatcgctggagaaattctccgaaaatgaggag
aaattattacataaaatcgatgctccgccaacgatgatgtcagtatattgcaaatattac
ttcaagcaactgaacgtgtaa
DBGET
integrated database retrieval system
