Pogonomyrmex barbatus (red harvester ant): 105428120
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Entry
105428120 CDS
T04903
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105428120
Membrane trafficking [BR:
pbar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105428120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
105428120
NCBI-ProteinID:
XP_011638519
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MLKVRPIMSSINSIDSQGTLQWDMMELARHLRQERLFVNSEQQNLQALNERVLFVSSQLA
QQAWITAQQRVNLNRLIVARPDCTPASCCLKANALENSHFIDAYKYLRYQACLSYGEFLG
ALRKSPKLLASCLVEGDRVIPESMQTIIQCLAAGLYGSCILPEDKSLVLQLLRHLMLLQI
IPSDNPRRLLRHGTCAFSRFYSIFHESLFSAKLFLTAALHNPIVQLLMEDEMFLDIDPDK
APIRFPPAERLKKFGKEGTPEYQAKLQRYRLWTVNSLYRITQRFIVNIRETMYCFPTSVC
WLVRQMAGLLSKNGNVDPKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPISYVARFNLM
QVGQILQLLSLQKYQSIDNKVIDLYKKFEKDSVSSIIDLMLDGATEELEEEPTMIDNNKF
QGLSRSAALFTESELNSLITFLNTIAGDNNGETTSHNSFDRKQLVEMLSQLPSGLLHNNK
LSNEYLETPNKRGVTGATGKGKGRIRMTTFSPNVTNESGEEINGTAAVAAAAAAAEEETL
DKNSQDVLVIPFGPTSGESIGLLSEQKVLRMELQNGMENGPVTLNLPDDASAEHPRQENS
NVERIETQEKRTRFSLSHDEVLFEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDN
LSDMVSANVSGRGTPNISGRDTPSSQITEGDDGRAAGEVRQLDLPPPNIPTKQSRSEIDD
KFCKFEIKKLIEGDETVSMVSDTWSTDVLASDSEIVEQQDRILLPVPPEQVAPVLAVEPT
STMLDISETASEAWSTDVLASDSERLTEVDTDDTASVARSDDTARSEIEIESRADSEGNE
ETLQSATPCPDGSGISFSSVAGIREDSGSGISMICHPSPTTSPLPSSSNVTGRGGTKSDY
RRSTMEYVDKNANNISNMDYGKPLRDDRLVHLIDKLQIDNGKQVERQAPAHNHIAAAAVA
PALLLANHISAPVLPEKSQNGDVKAEIVNQESDNCMTSVGDTVGRLSTASLTSSSSSGSE
PRVKSNISASDLPTPTVNGTCDAVDGSVPNFSKPNASTGAIPKSISFDMTAERGDKELLD
DDQKNKRGFFGKLKLSLRNRRGKAIRGTDERYFDREAGGDGGVDICRHRLRKIMSEDVTS
SGNVAGDTTDDILAKYRRKPSTASDTASVESNQSRTKEVEDERLSIDPNNIELSYAFADA
KRKLRMVLSTADLQHIPWNTSERHCWSQKENELVAFLQLQLAEAINLQDRALIAHLHETL
RCVRLFNDDGCRKLFKSLREDYQKRSPYIAYLIRCRQGLLSTLAHLDRLCVRVKCDRDAI
NNHLVSVCVRVFLEKREAFLLRFCDEFKKLTLADEKQDLVDNFLGKVHAEMDNDPIWQSA
SANQLDLARMVVERTVMARVYHNALYPNGDGDVYRDQLLHDHIKKLAKVVTPNHKDLRIP
KVYHYECPWPWAQAELAVISAYKTPRDKLQCVFRCATTIMNLLSMASERGIPAADDLIPV
LVYVIIKTNPPSLLSTVQYVDSFYGNRLEGEEQYWWTQFCSAIEFIKTMD
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggtacgtccaataatgtcatcgattaacagtatcgattctcaaggcacatta
cagtgggatatgatggaactagctcgtcatctgcggcaggaaagactctttgtcaactcg
gaacaacaaaacttacaggctcttaatgaacgagtcttgttcgtctcatcacagttagca
cagcaagcatggataaccgctcaacagagagtcaatctgaatcgcttgatagtggcgagg
ccggattgtactccagcatcatgttgcctaaaagcaaatgcattggaaaattctcatttt
atcgacgcatataagtacttgcgctatcaggcatgtttgtcctatggagaattcctgggt
gcactgcgaaaatcacccaaactccttgcttcgtgcctagtcgagggagacagagtcatt
ccagaatcaatgcagacaatcatacaatgcttggctgctggattatatggcagctgtata
ttgccagaggacaaaagtttagttctccagttgctgaggcatcttatgttgttgcagata
attccgtctgacaatccgcgaaggttgctcaggcacggcacctgcgcattttccagattt
tactccatttttcacgaaagcctgttttctgcaaagcttttcttaacagcagctttgcat
aaccctatagtgcaattactcatggaagatgaaatgttcctggacatcgatccggataaa
gcgcctattagatttccacctgcagagagattgaagaaattcggaaaagagggcacgccc
gagtatcaagcaaaattacagcgttacagactgtggacagttaattctttgtatcgtatt
acacagagatttattgttaacattcgcgaaacaatgtactgctttcctacgagtgtttgc
tggcttgtaagacaaatggcagggctccttagcaagaatggaaatgtagatccgaaagaa
gtacatgccatgtgcacggatcttgtatttacgtactttatttgccctgctatagttaat
ccagaaccttatggtattaccgatgcaccgataagttacgtcgcgaggttcaatttgatg
caagttggacaaattttgcaattgctttcgctacaaaaatatcaaagtatcgataataaa
gttattgatctttataaaaagttcgagaaggattcggtgtcttccataatagatttgatg
ctggatggtgcgacggaagaactggaggaggaaccaacgatgattgacaataataaattt
caaggcctgtcacgatccgcagcattgtttacggaaagtgaattgaattccttaattacg
tttttaaatacaattgctggtgataacaatggagaaacgacatcgcataattcattcgat
agaaaacaattagtcgagatgctgtcacaattaccttcaggtttactgcataataataaa
ctgagtaatgaatatttagaaacacctaacaaacgaggtgttacaggtgctacagggaaa
ggaaaaggacgtataaggatgactacattttcaccaaatgtaacaaacgaaagtggagaa
gaaattaatggcactgctgctgttgctgctgctgctgctgctgctgaagaagaaacattg
gataaaaattctcaagacgtactagtcatacctttcggtccaacaagtggagaatccata
ggactactcagtgaacagaaagttttacgcatggaacttcaaaacggtatggagaatgga
cctgttactttgaatctccctgatgacgcttcagctgaacatcctagacaagagaacagc
aatgttgaacgcatcgaaacgcaagaaaaaaggactcgattctcgctatcgcacgacgaa
gtattgttcgaaggatcgattggcaatacatccgacaatttagaagctgtatcagaagcc
gcatccaatcatagtgttgcttcttctctagaattagagacagaagatcaaaatgataat
ctctcagacatggtgtcggctaatgtgtcgggtagaggaactcctaatatatcaggtcga
gatacaccatcctcccaaattactgaaggagatgatggacgtgctgcaggtgaagtaaga
caattggatttgccaccgcctaatatcccaactaagcaaagtcgatctgaaattgatgat
aaattctgtaaatttgagattaagaaacttattgaaggagacgagactgtttctatggta
tccgatacttggtctacggatgtattggcctctgatagtgaaatagtcgaacaacaagat
cgaatattgcttcctgttcctcctgaacaggttgcacctgttttggctgttgaacctacg
tcaaccatgttagacattagtgaaaccgcctctgaagcctggagtacagatgtattggcc
agcgattcagaaagattgactgaagtagataccgatgatactgctagcgttgctaggtct
gatgatacagccagatcagagatcgaaatagaaagccgtgctgattccgagggaaatgaa
gaaacgcttcaatctgcaactccatgtccagatggctcaggcatcagtttttcatcagtg
gcaggaattcgggaagattctggctcaggaatctcaatgatatgccatccgtcaccaaca
acgtctccgttaccatcatcgtcaaacgtaacaggtcgtggtggaaccaaatctgattat
cgacgtagtacaatggaatacgtagataaaaacgctaacaatataagcaatatggattac
ggtaaaccgttgcgggacgacagactggttcacttgatagataaacttcaaatagacaat
ggtaagcaagttgaacgtcaagcacctgcgcacaatcacatcgctgcggctgcagtcgca
ccggcgttgctattagctaatcatatttctgcgcctgttttgccagaaaagtcccaaaac
ggtgacgtgaaagcagagattgtaaatcaggaatcggacaactgcatgacatcggtcgga
gataccgtaggccgattaagcacggctagcttaacatccagcagcagttctggatcggaa
ccacgtgtgaagagtaatatttcggcgtcggatttaccgacaccgacagttaatggtact
tgcgatgcggtagatgggtcagttcccaatttttccaagccaaatgcatcaacaggagcc
attccaaagagcataagtttcgacatgactgctgaacgtggcgataaagaactattggac
gatgatcaaaagaacaaacgtggtttctttggtaaattaaagttatcattgagaaatcgc
agaggtaaagcgatccgcgggacggatgagagatattttgatcgagaagctggtggcgac
ggcggtgttgatatatgcagacatagattgcgcaagattatgtcggaagatgtaacgtca
tccggtaacgtcgcaggcgatactaccgatgacatactagcgaaatataggagaaaacca
agtacagcaagcgacaccgcctcggtcgaaagcaaccagtctcgcacaaaggaagttgaa
gacgaaagactttcaatcgatccaaacaacatagaactgtcttacgcttttgcagatgct
aaaagaaaattacgtatggtacttagtactgctgaccttcaacacattccatggaatacg
tcagagagacattgttggtcgcagaaagaaaacgaattggttgcatttttgcaactacaa
ttggcagaagctataaacttgcaagatagggcattgatagctcatcttcatgaaacttta
cgttgcgtgcgtctatttaacgacgatggatgtagaaaactcttcaaatctcttcgagag
gattatcaaaagcggtccccttatatcgcgtatttaatcagatgtcgtcagggattgctg
tcgacattagctcacttagatagattatgtgtacgagttaagtgcgatcgagatgctatc
aataatcatctcgtatccgtctgtgtaagagtgtttttggaaaaaagagaagcttttctc
ctgcgtttctgcgatgaatttaagaaacttacactggctgatgaaaagcaggatctcgtg
gataactttctagggaaggtgcacgctgaaatggacaatgacccaatttggcaatcggcg
agtgccaatcagttagatttggcaagaatggtagtggaaagaaccgtcatggcacgggtg
taccacaatgcgctttatccaaatggagatggagatgtatatagggaccagcttcttcac
gatcatattaaaaagttggcgaaggtcgtaactccaaatcacaaggacctacgcattcca
aaggtttatcattacgaatgcccctggccatgggcgcaggctgaattggctgtgatatcg
gcgtataagactcctagagataagttacagtgtgtatttcgttgcgcgactactatcatg
aatcttctctccatggcgtcagaaagaggcatacctgctgccgatgatctgattcccgta
ttagtttatgtcataatcaagactaatccgccgtcgttactatcgactgttcaatatgta
gacagcttttacgggaatcgattggagggcgaggaacagtactggtggacgcaattctgc
tccgcgatcgagtttatcaagacaatggattaa
DBGET
integrated database retrieval system
