Pogonomyrmex barbatus (red harvester ant): 105428167
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Entry
105428167 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbar03016
]
105428167
Enzymes [BR:
pbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
105428167
Transfer RNA biogenesis [BR:
pbar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105428167
Prokaryotic type
105428167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H
Motif
Other DBs
NCBI-GeneID:
105428167
NCBI-ProteinID:
XP_011638603
UniProt:
A0A6I9W9N4
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSANNVALTDKGSAGNRYARGSRRRGGFQNKSRGRGFKRAFERSPQGNVKRSKLDVGNRL
KEADIGITEYISKHLGFSAIIKERYNDFHVNEIDLDGQVAKLTHQDIPLEPCDNESIEDL
KTLVSSTIWDQLQALGEENPSTVEIDVTNLDKVERRTIHAIAKKLANVVSQTIDKDDKKF
LTIVPNTKGNKNDQKVRRDKRVDWKRRGGDYCHFLLHKVNMDTIDVVNQLAMSLRMQPNN
FCYAGTKDRRAWTTQWMSLRKVEPRDILRASKSVRGAYVGNFKYTKDSLKLGMLRGNQFR
IALRNACETDEKIEQAMISLRDTGFINYYGLQRFGTIPTIPTHEIGKCLLQGKWHEAIEL
ILKPRPEKDNELAEARQVYAETKDAHAAYAKLKRTDKIEARLLKSLQTQGSKNPLGVLDS
IPRNIRLMYIHAYQSFVWNHVVSRRMKEFGTDVIVGDLVYDRRNCKETMNDETTDYDNIE
DKTDTSIEERDTEANNESSNQDDFPVVKILTENDLPNYTLADVVMPQPGWKVIYPPYAKA
WFDEFLTKDGLTTDLKQNNKKYSLTGAYRNILEIPTNLSWKIMHYENXHDDLILSDIEEI
RKLPSPQDKLNGKNKALIIEMCLKSSSYATMALREILKNDTSAETQAALSASYDTENVRS
NTSIVDEYSDRETTKIEKDDTQESVKFHEEFNGIKEDEAMRIHDTENSSEICQS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaataatgttgctctcacagataaaggttctgccggcaatcgctatgctcgt
ggatcaaggcggagaggtggttttcaaaacaagtctagaggaaggggtttcaaacgtgca
ttcgagcgatcgccacaaggaaatgtaaagagaagcaaactggatgtcggcaacagactg
aaagaagctgacataggaattacagaatatattagcaagcatcttggcttctctgcaata
attaaagagaggtacaatgattttcatgttaacgagattgatcttgatggccaagtggca
aagctgacacatcaagacatcccacttgaaccttgtgacaatgaaagtattgaagatctg
aagacgctggtatcgtcgacgatctgggatcaactacaagctttgggagaggagaatcct
tcaaccgtggaaattgatgtaactaatcttgacaaagttgaacgcaggactattcatgca
attgcaaagaaattagcgaacgtagtcagccaaacaatagataaagatgacaaaaagttt
cttacaattgtgccaaatactaaaggcaataagaatgatcaaaaggtgcgtagagacaag
agagtagattggaagagacgcggcggtgattattgccactttttattacataaagtgaat
atggatacgatagatgttgtgaatcaattggcaatgagtttgcgaatgcagccaaataat
ttttgttacgctggcacaaaagatcgtcgtgcgtggacgactcagtggatgagtctaaga
aaggtggagccgcgtgacatactgagagcaagtaaaagtgtgcgtggtgcgtatgtagga
aactttaaatataccaaggatagcctgaaactaggcatgctacgtggtaatcagtttagg
atagcattgaggaacgcttgcgagacagatgagaagattgagcaagcaatgatatcgtta
cgtgacactggctttattaattattatggtttacaaagattcggcacgatacctactata
cccacacacgaaatcgggaaatgtctacttcagggtaaatggcatgaagcaattgaatta
attttaaaaccacgaccagaaaaagataatgaattagcagaagccagacaagtctatgca
gaaaccaaggatgctcatgccgcttacgcaaagctcaaaagaaccgataagatcgaagcc
agacttttgaaaagtctacaaacacagggtagcaaaaatcctctaggcgtgctagactca
atccctcgaaacattcgattaatgtacattcatgcttatcagagcttcgtttggaatcac
gtcgtgtcgagaaggatgaaagaattcggaacagatgtaatcgttggtgacttggtttat
gacaggcggaattgcaaagagactatgaatgacgaaactacggattatgacaatattgaa
gataaaactgatacctctattgaggaaagagatactgaagcaaataatgaaagttcgaac
caagatgatttcccagtagtgaaaattctcaccgaaaatgatttaccaaattatactctg
gcggacgtagttatgcctcaacccggatggaaagttatatatccgccatatgcaaaggct
tggtttgatgaatttttaaccaaagatggattaactactgatcttaagcaaaacaataaa
aaatacagcttgactggagcctatagaaatatattggaaatcccgacaaatctatcctgg
aaaattatgcattatgaaaatnaacatgatgatctaattctatcagacatcgaggaaata
aggaagcttccatctccacaggataaactaaatggaaaaaataaagcgttgattatagaa
atgtgcttgaaatctagcagttacgctacaatggccctgcgcgaaattttaaagaacgat
acttcagcggaaactcaggctgctttatccgcttcttatgatacagagaacgtgcgatcc
aatacaagtatcgtagatgagtatagtgatagagaaacgacaaaaattgagaaagatgat
acacaggaaagtgtaaaattccatgaagaatttaatggtataaaagaagacgaagcaatg
agaatacatgatacagagaattcgtctgaaatatgtcaaagttaa
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