Pogonomyrmex barbatus (red harvester ant): 105428200
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Entry
105428200 CDS
T04903
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105428200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105428200
03012 Translation factors [BR:
pbar03012
]
105428200
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105428200
Translation factors [BR:
pbar03012
]
Eukaryotic type
Release factors
105428200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
105428200
NCBI-ProteinID:
XP_011638662
UniProt:
A0A6I9W8Z8
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MANSIAPDSWEQQADTNGDIVGPPTSQDKSIESKFSTLNVNAAEFVPSFCINSSPQSNVA
ATATTTAAADSSPCNVATTTTTSVSATAAAAAAAAAAAAAAAAAAAAASSASATMNTVTI
TSVPVEIHHGNSTPVVLSDPIGSRVEEPPAGGGAPPPNVNDQLNTSPEHQPADSWEEAAV
DGDPLLTPENEEADNDEDEELVVKVPKKKPVKVAEDTKSKKEHVNVVFIGHVDAGKSTIG
GQIMALTGMVDKRTLEKYEREAKERSRETWYLSWALDTNQEEREKGKTVEVGRAYFETER
KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREHAMLAKTAG
VKHLVVLVNKMDDPTVEWDEGRYNECRDKILPYLRKLGFNPAKDLTFMPVSGQLGIGLKD
PIPEHLCNWYSGPPFIPFIDSLPSLNRKSNGPFIMPIVDKYKDMGTVVMGKVEAGEAKKG
QSLLVMPNRTAVTVDQLWSDDEEVTSVGPGENVKIKLKGIEEEDVSPGFVLCDSNNPIKT
GKVFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKTGDKSKTRPRFVKQ
DQVAIMRIECAGVICLERFKLFQQMGRFTLRDENKTIAIGKVLKVVE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagcatagcaccagactcgtgggaacagcaggcggacacgaacggcgacatc
gtcggcccacctacgtcgcaggacaagtccatcgagagcaaattctccaccctgaatgtc
aacgctgcggaattcgtgccttccttctgcatcaactcgtcgccgcagagcaacgtcgcc
gcgacggcgacgacgacggcggcggccgacagcagcccctgcaacgtcgcgacgacgacg
accacctccgtctccgctaccgccgccgcggccgcggccgcggccgccgctgccgctgcc
gccgccgccgcagcagcagccgcttcctccgcatccgccacgatgaacactgtaaccatc
acctccgtgcccgtcgagatacatcatggaaattctactcctgttgttctatcagatcca
atcggcagtcgagttgaggagcctcctgctgggggaggggctccaccgccgaatgtcaat
gaccaactaaataccagcccggagcaccaacctgcagattcttgggaagaagcagcagtg
gatggagatcctttacttactccagaaaacgaggaagccgataacgatgaagacgaagaa
ctggttgttaaagtacccaaaaagaaacctgtaaaagtagcggaggatactaaaagcaaa
aaggaacacgtcaacgttgttttcataggacacgtggatgctggaaaatcaactatcgga
ggccagatcatggcgcttacggggatggttgacaaacgtaccttagagaagtatgagcgg
gaggcgaaagaaagaagtcgagaaacatggtacttaagttgggcactggacacaaatcaa
gaagaaagagaaaagggaaagactgtggaagtagggagagcctactttgagacagaacga
aagcattttacaatattagacgcacccggccataaaagcttcgtaccgaatatgatcggc
ggcgcggcgcaagccgatttagcagtcctcgttatctccgcaaggaaaggcgaattcgaa
acgggcttcgatagagggggtcaaacgagagagcatgctatgcttgctaaaaccgcgggt
gtcaaacatctggttgtattagtaaataagatggacgatcctactgtcgagtgggatgag
ggcagatacaatgaatgcagggataagatactgccatatcttcgtaaattaggattcaat
cctgcgaaagatcttacattcatgccagtttctggtcagctcggtattggcttaaaggat
ccgatacccgaacatctctgtaattggtacagcggcccaccattcataccttttatcgat
tcgctaccctcgcttaaccgtaaaagcaatggaccctttatcatgccgatcgtcgacaaa
tacaaagatatgggaacagtagtaatgggcaaggtcgaagcaggagaagccaaaaaagga
cagtcattgctcgtaatgccaaataggacggcagtaacagtggatcagctgtggtcagat
gacgaggaagtaacgtctgtcggacctggagaaaatgtgaagatcaagctgaaaggcatc
gaagaagaagatgtcagtcccggatttgttttatgcgacagtaacaatcctatcaagacc
ggcaaggtctttgacgcgcaagtagtgattctggaacacaagagcattatttgcgcggga
tacagtgcggtcatgcatattcattgcgccgcggaggaagtcacggtaaaagcactcatc
tgtctggtggataagaaaacgggcgataaaagtaagacgaggccaaggttcgtcaaacaa
gatcaggtggctataatgagaatcgagtgtgcgggagttatatgtctcgaaagattcaag
ctattccaacaaatgggccggttcactcttagggatgaaaataaaactatcgcaattggc
aaggtgctgaaggtcgtcgaataa
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