Pogonomyrmex barbatus (red harvester ant): 105428350
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Entry
105428350 CDS
T04903
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105428350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105428350
03009 Ribosome biogenesis [BR:
pbar03009
]
105428350
Messenger RNA biogenesis [BR:
pbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105428350
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
Pre-60S particles
RNases
105428350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF5750
Motif
Other DBs
NCBI-GeneID:
105428350
NCBI-ProteinID:
XP_011638926
UniProt:
A0A6I9X3D7
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All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MFATRVVKYLSKYLYHGARRLINDHAISTPTEVRNEGRNENHIVWLDMEMTGLDVEKCHI
LEVACFITDEQLELASDYLNIVVHQPDEILENMSDWCKLYHKKNGLIHDCQQSKVTLEEA
QEKTLSFLKNHVPKGTCPLAGNSIYMDRIFLKKYMPLVDDYLHYKIIDISTIKNLAMRWQ
PSISKTAPKKLRYHRASYDIKESLYELRYYRKHLFVSQTQS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccacacgtgttgttaaatatctttctaaatacttatatcacggagctcggcgt
ttaatcaatgatcatgcaatttcgacaccgacggaagtgcgaaatgaaggtagaaatgaa
aatcacattgtctggctcgatatggagatgacagggctagatgtagaaaaatgtcatatc
ttggaagttgcttgttttataactgatgaacagttagagcttgctagtgattatctgaac
atcgttgtgcatcaaccagatgaaatcttagagaatatgtctgattggtgcaaactgtat
cataaaaagaatggcttgatccatgattgtcaacagagcaaagtaacactggaggaagct
caagaaaaaacgctaagttttttaaagaatcatgtaccaaaaggaacatgcccgttggct
ggtaactcgatttacatggatcgcatattcctaaaaaaatacatgccattggtcgatgat
tacttgcattataaaattatcgacattagcacaattaaaaatttggcaatgagatggcaa
ccgagcataagtaaaacagctccaaaaaaactacgttaccatagagcttcatacgacata
aaagaaagtctatatgaactccgttactatagaaaacatttatttgtatcacaaactcaa
agttaa
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