Pogonomyrmex barbatus (red harvester ant): 105428508
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Entry
105428508 CDS
T04903
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105428508
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105428508
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
Helicases
105428508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105428508
NCBI-ProteinID:
XP_011639171
UniProt:
A0A6I9WIK3
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MKEEIKDFSSLKLNSWLLAQCESMGLKKPTPIQQNCIPRILMGEDCIGCAKTGSGKTLAF
ALPILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKAINLKKCVIVGGMDMMVQGLE
LSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLDEADRLLGGHFDEQLKKIFSALPKQ
KQVLLFSATMTDALDKVKQIASDKVFLWEEKDDGGIATVRELDQRYVLCPKDVLDSYLVE
VIRTFRATNKNGSIMIFTDTCKHCQLLSMTLNDVGFTNVALHAMIKQKERLAALNRFKSD
HVQILIATDVAARGLDIPTVELVINHVIPNVPKEYIHRVGRTARAGRNGMAISLITPHDI
KLLHAIEDTVGTKLTEYKVDDKKIVTILTQISVAKREAEIRLDETDFYEKKMINKRKKLI
LEGYESDETQELDNINDIREKRKKRKERKKKS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggaaattaaagatttctcgagcttaaaactgaactcttggcttctcgcgcaa
tgcgaatctatgggtttaaaaaaaccaactccaatccaacagaattgcattcctcgaata
ttgatgggcgaagattgcataggttgtgccaagacaggtagtggcaagactctcgcattc
gctctgcctattttgcaaaagttgtgtgaagatccgtacggtatattcgctcttgtctta
acacccacgagagaactagctttccagattgctgatcagtttgctgctattggcaaagct
atcaacttgaagaaatgtgtaattgttggtggtatggatatgatggttcaaggattggaa
ttatcaaaacgaccgcatatagttgtcgctacaccaggtcgactagcagatcatttagat
agttgcgatactttttctttacagaaaatcaaatttttggtattggacgaggcagataga
ctgctcggtggtcattttgatgaacaacttaagaaaatatttagtgcattacctaaacag
aaacaagttttgttatttagcgcgacaatgacagatgctcttgataaagtgaagcaaata
gcctctgataaggtttttctatgggaggagaaggacgatggtggtatcgcgactgtaagg
gaattagatcagcgttacgtgttatgtcccaaggatgtactcgattcatacctggtagaa
gtaattaggacatttcgtgccacgaacaaaaacggttctattatgatattcactgacact
tgcaaacactgtcaattattatcgatgacgttgaacgatgtgggatttacaaacgtggct
cttcacgcgatgataaaacagaaagaacgtttagcagcattaaacaggttcaagtcggat
catgtacagatactaattgctactgatgttgcggcaagaggtttagatattcctacagta
gaactggtcattaatcatgtaataccgaatgtaccaaaggaatacattcatagagttggt
aggacagctcgtgcaggtagaaatggtatggcgataagcttgataactccacacgacatc
aaattattgcacgcgatcgaagacaccgtaggcactaagttaacggaatataaagtagac
gataagaaaatcgttacaattctgacacaaatatcagtcgcgaaacgagaagcggaaatc
agattggacgagactgatttttatgaaaagaaaatgattaataaacgaaaaaagttaatt
ttagaaggatatgaaagtgacgaaacacaagagttggataatataaatgacatcagagag
aaaaggaaaaagcgtaaagagagaaagaaaaagagttaa
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