Pogonomyrmex barbatus (red harvester ant): 105428663
Help
Entry
105428663 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105428663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105428663
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105428663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
105428663
NCBI-ProteinID:
XP_011639390
UniProt:
A0A6I9X4N4
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSMEDDYCVSPSVEQFXFDRSKQQNIASFITEPDIV
EDNEDIDDPLPVSNESRKYNFSELERTKLMSCLETIRNVIGDTVPDSKLKEKIILSNFDA
NVALDAILKESSPKNISDSMANKEQLERYPGKLSPKPTLKLTTPSTVKVVPTGTKPVVKG
FDLSGIENADLLNPHCDSPNRSNRNSPEIRHKEDIAQKEKRTISPKMNSPRCQSPVLNHL
TSELDFKVKSNASNEEKLNIEAIYKNKRGDSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQ
VSQRLFHKYQQESKKIGKQSFAYAWVFDETGEERERGITMDIGHSKFETDTKSITLLDAP
GHKDFIPNMIIGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKDRFNEIVDKMSVFLKQVGFKDTITFVPCSGLSGENIVTKPKEQLSNWYTGP
TLVTVIDNFKCPERPVNKPFRFSVNDIFKGTGSGFCVFGHIETGMVSLGDKVLILPQNEI
AVVKGLQIDEVSTGNAFAGDHVVLTLAGIEQQNVGIGNIICNPQNPVPVTTCFQAHIVIF
AITKPITKGLPVVMHQQSLIQPAIITKLIAQLHRSTGNIIKKKPRCLSKNSSAIIEVTTQ
TPVCMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgtccgttctatgaattactcagatgagtatgacggctatgat
gatgtttatggacattcaatggaagatgattattgtgtatcacctagtgtggaacaattt
ntatttgatcgaagcaaacaacaaaatattgcttcattcatcacagaaccagatatagta
gaagataatgaagatattgatgatcctttaccagtctcgaatgagtctcgaaaatataac
ttttctgaattagaaaggactaagttaatgtcttgtttagaaacaattagaaatgttata
ggtgatacggtacctgattctaaattaaaagagaagattattctatcaaattttgatgca
aacgtagcacttgatgctattttaaaggaatcatcaccgaaaaatatctctgattcaatg
gcgaataaggaacaattagaacgatatccaggtaaattatcaccaaaacctacgttaaaa
cttacaacaccgtctactgtaaaagttgtgccgactggaacaaaacctgttgtaaagggt
tttgatttaagtggtatagaaaacgcagatttattgaatccacattgcgacagtccaaat
agatctaatcggaatagtcctgaaattaggcataaagaggatattgcacaaaaagaaaaa
agaacaatctcaccaaaaatgaatagtccaagatgtcaatcacctgtattgaatcattta
acatcagaattagatttcaaagtaaaatctaatgcatctaacgaagaaaaactgaacatc
gaagcaatatataagaataaaagaggtgacagcaaggaacagcttcatttagtggttgta
ggacatgttgatgctggaaaaagcacattactcgggcgactactttgcgatttaggtcaa
gtctcacagagactcttccataaatatcaacaagagagcaagaaaataggaaaacagtca
tttgcctatgcttgggtatttgatgaaactggtgaagaaagagaacgaggaataacaatg
gacataggccactcaaaatttgaaacagacacaaaatctatcactctcctagatgcacct
ggtcacaaggattttattccaaatatgataattggtgctacacaagcagatgttgcctta
ttggtggttgatgcaaccagaggcgaatttgaaactggatttgacagtggtggacagaca
cgcgagcatgccctattgttacgttctttgggagtatcgcaactagctgtagttgttaac
aagctagacactgtaaattggtctaaggatagattcaatgagatagtagacaaaatgagt
gtatttctgaaacaagttggttttaaagataccatcacttttgtaccttgcagtggttta
tctggagaaaatattgtaacaaaaccaaaggaacagctttctaattggtataccggacct
actttagttactgttatcgataattttaagtgtccagagcgtcctgtaaataaaccattc
cgtttctcagtgaacgatatatttaaaggtactggatcaggattctgtgtatttggtcac
attgaaacaggtatggtatctttgggtgacaaagttttaatactacctcagaacgagatt
gcagttgtaaaaggtcttcaaatagatgaagtttcaacgggaaatgcattcgccggtgat
catgttgtattaacattggcaggaattgagcagcaaaacgtgggtattggcaatatcatt
tgtaatccgcagaatccggtacctgtaacgacctgctttcaagcgcacatagtaatattt
gcgataacaaagccgatcacgaaaggtcttccagtagtaatgcatcagcagtctttaata
caaccagcgattattacaaagttaatagcacagcttcatcgaagtactggaaatataatc
aagaaaaaacctcgctgcttgtcgaaaaattctagtgccatcattgaggtcacgacacaa
acaccagtctgcatggaactatacaaagatattaagcaactaggtagagttatgttacga
ttagaaggtactactatcgcagctggattgattacaaagattttgtaa
DBGET
integrated database retrieval system
