Pogonomyrmex barbatus (red harvester ant): 105428694
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Entry
105428694 CDS
T04903
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105428694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105428694
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105428694
mRNA degradation factors
5'-3' decay
Decapping complex
105428694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
105428694
NCBI-ProteinID:
XP_011639425
UniProt:
A0A6I9WAT6
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MTDRTELRMNVAALKRVDPYVKDILETATHVALYTFNADENEWEKTDIEGALFLYSRNGE
PYNSILIMNRLNTNNLVEPVAPGLDLQLQEPFLLYRNSRCNIYGVWFYEKEECVRIANML
NKLLKECEESRKINNKPLLKAKKTSGSNVNNVDIFSMLSKAQEDFNTSRSSGGGGGGSDS
GNMVTGSKSPSITPLTDNISGPLAAPLGPDVTSQSVMDFFAKAKVNTGHFKPSDQPTPGS
TVAVESKPLLARLMSHPAAHTLEHIEKQQRSVTPQPSHQSQPTSIPSTNKPKRRNKTTPQ
QESVISTSAPISQDLPLPITPNVNDSNGSTGFLRIQSPTNVASSTLRNHQASNVTTTNNT
NPLASLFAHASGSTSSDDIIPAAPTLSGRGSAPALIPPVMFAAPSPPEPLSRPLEPLTRN
QLLQAFNYLLKSDPDFINKLHEAYVKSFGEILS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcgaaccgagttgagaatgaacgtggctgctttgaaacgagttgatccttac
gtcaaggatatcttggaaactgcgactcatgtcgctctgtatacatttaatgcggatgaa
aatgaatgggaaaagactgacattgagggcgctctattcttgtattcgagaaacggcgaa
ccatacaacagtatcctcattatgaacagattgaatacaaataatctagtagaaccagtt
gctccaggtttagatttgcaactgcaggaaccatttctgctatacagaaattccagatgc
aatatctatggtgtttggttttatgagaaagaagaatgtgtgcgtattgcaaatatgctg
aataaacttttgaaggaatgtgaagaaagtcgcaaaattaataacaagccgctacttaag
gctaaaaagacctcgggatctaatgtaaacaatgtggatatattcagtatgcttagcaag
gcccaagaagactttaacacaagtagaagtagcggaggaggtggaggtgggagcgacagc
ggtaacatggtaacaggatcaaagtctccatcgataacgccattgactgataatatttct
ggacctctagctgctcccttaggacccgatgtcacttcgcaaagtgtaatggattttttt
gctaaagctaaggtgaatactggacatttcaaaccaagtgatcaacctacgccgggaagc
acagttgcagttgagagtaaacctttactcgcccgtttaatgtcccatccggcagcgcat
actttagaacatatcgagaaacaacagagatctgtaacaccgcaaccatctcatcagtca
cagccgacgtcaattccatccacaaataaacccaaaagacgaaacaagacaactccgcaa
caagaatcggtcatatccacgtcagcgccaatttctcaagatttgccgctacctatcact
ccgaatgtcaatgactcgaacggatcgactggatttctcaggatacaatcgccgactaac
gtagcgtcttctactttaagaaatcatcaagcttcgaatgttactacaaccaacaatacc
aatccacttgcgtcattatttgctcatgcttctggaagtacgtcatcagacgatattatc
ccggcggcacctacgttgtcgggaagaggatcggcgccagcattgataccacctgtgatg
tttgccgctcccagcccacccgaacccttaagcagaccgttagaaccgttaacgaggaat
caacttttacaagcattcaattacctgttgaaaagtgatccagattttatcaacaaactt
cacgaggcctatgtcaaatcgtttggagaaatactttcttaa
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