Pogonomyrmex barbatus (red harvester ant): 105429344
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Entry
105429344 CDS
T04903
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105429344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105429344
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105429344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
105429344
NCBI-ProteinID:
XP_011640556
UniProt:
A0A6I9WDK5
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSAQQSPAALQTTVDREKVYTWIIELSNPETRENALLELSKKREVVPDLAPMLWHSFGTT
ASLLQEIINIYPAINPATLTAYQSNRVCNALALLQCVASHPETRSAFLQAHVPLFLYPFL
HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVAT
FILQKILLDDSGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRLSDNP
RALLALRQCLPDQLRDNTFATCLQEDASTKHWLNLLLKNLEAGPQPGPPTQSSQQDPRTI
GMSPHLTS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcagcaaagcccggctgccttacagacaactgttgaccgcgagaaagtctac
acatggataattgagttgtcaaaccccgagacgagagaaaatgctcttttagagttaagc
aagaagcgtgaggtggtaccagatctggcaccgatgctatggcattcatttggcactacg
gcatctctcctgcaggaaatcatcaatatttatccagcgatcaatcctgcgacccttaca
gcttatcagagtaatcgagtatgcaatgccttagcattgttgcaatgtgtagccagtcat
ccagaaacgagatctgcattcctacaggctcatgtaccactgtttctgtatccatttcta
cataccgtaagcaaaacaagaccatttgagtatctccgcttaacgagtcttggagtaatc
ggcgcattagtcaaaaccgacgagcaagaagtgatcacttttctgctcactactgagatc
attccgctttgcttaagaatcatggaaagtggctcagaattgagtaaaactgtggcgaca
ttcatattacagaaaatattattggatgatagcggcctgtcctacatctgtcaaacctat
gatagattcagtcacgtcgctatgattttaggaaaaatggttctttccttagccaaagat
ccttctgcaagattgctgaaacatgtagtacgatgttatctgagattatctgataatcca
agagctctcttagccttacgacagtgtttaccagatcagctgcgtgataacacatttgca
acgtgtttacaagaagatgcttcaactaagcattggttaaatttacttcttaaaaatctg
gaagccggtccgcaaccgggtccgccaactcaatcgagtcaacaagatcctagaacaatt
ggtatgtcaccacatctcacatcttaa
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