Pogonomyrmex barbatus (red harvester ant): 105429442
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Entry
105429442 CDS
T04903
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105429442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105429442
03009 Ribosome biogenesis [BR:
pbar03009
]
105429442
03036 Chromosome and associated proteins [BR:
pbar03036
]
105429442
Enzymes [BR:
pbar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
105429442
Messenger RNA biogenesis [BR:
pbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105429442
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
RNase
105429442
Prokaryotic type
rRNA processing factors
105429442
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
105429442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
105429442
NCBI-ProteinID:
XP_011640712
UniProt:
A0A6I9X830
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MGDPLSMNTGQTYCWNTKVAEQDVKYYSGPQMSNFPNYNQPLNYNSSYSYNIPPPNGLPP
NLSPANVPSPNIPSIRSFNVSNIPPPNIPPPNIPPPNIPPPNLSNIPPDVNSTDSMYHFA
PTTYHNEVANFCNNIPYQNQINPQCGGQYYDRINSGHEQSISKNYTNWDMPENIYNSNSA
NKWHANNSSANWTVHQSTSASWYGTNATTYDKDKSCSTQMYKLLQRTEESKWKCDNRETM
NKHTINRQRSRSPYGKSEKIYRSQYDNRRDRYRRSNREISNSRDSAYDSRHFEKSSSKKR
SYTSRSEESYISRKRSSSRESHLTRDTSPANSKRTKGPTEREILLEKYRRNYCATSKDIQ
RKLNELSAMGSKGILESEKKIWTRSSPADLYYIRDEDNPKIMKGTTKLQELCMTFKKLLI
DRAAAARELQPPYEPPPRKTRARLCRHKSEACSSSSSDSENSMDEDDRTMEELMAKKQHP
QRLHPEMWFNDPGEMNDGPLCRCSAKSRRSGIRHGIYAGEGAINKCDLNTNNADKLHHYR
ITISPPTNFLTKTPTIIKHDEHEFIFEGFSMLSHFPLVKLPTCKVIRFNIEYTILYIEEK
LPENFTIQELDFFQMYLFREILELVDFDLHAAQDKSGCGQFHFMPRFVRDLTDNGQEILS
MNEVLNYLIKSSTLLINPDDLSKLVAMPQYKWQDFADEVKGMVVTYPGKKPCSVRVDQLD
RNQDDQSSGISHTYPEIVHFGIRPPQLSYAGNADYQKAWRDYVKFRHLLANMSKPSFEDK
RKLEAKENKLQELRTQSKMKRDVTVDVSSEGFYRTGIMCDIVQHAMLIPVLVCHLRFHKS
LDNLERTLGYEFKNRYLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYM
NTRKRGINTLINIMSRFGAKTETESSIAHNERLEFLGDAVVEFLTSIHLFHMFPDLEEGG
LATYRAAIVQNQHLAVLAKKLNLEEYMLYAHGSDLCHDLELRHAMANCFEALMGSLFLDG
GIEVADRVFGETLFKNEDDLAKVWVNYPRHPLQEQEPTGDRQWIPSFELLQKLTKFEESI
GIEFTHIRLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSEYLYKFFPEHHEGHL
SLLRSSLVNNKTQAVVCDDLGMTQYALYGNPKAELKTKDRADLLEAFLGALYVDKGLKYC
HVFCNVCFFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTR
VYTVAVYFQGKRLATASGHSIQEAEMNSAKEALEKSQDLFPQLDHQKRVIAKSMKMQQWP
SKQKPRGKSEKRPHDRSDDSDCSQNWRRSRSRERNTSKKKET
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcccttatcgatgaacacaggacagacatattgttggaataccaaagtggct
gaacaagatgtgaaatattattcaggtcctcagatgtcaaattttcccaactataatcaa
cctctcaattacaactcttcctattcctacaatatacctcctcccaatggattacctcct
aatttatcacctgccaatgtaccatctcccaatataccaagtattcgttcttttaatgta
tcaaatattcctccacccaatattcctccaccaaatattcctccaccaaatattcctcct
ccaaacttatcaaatatcccacctgatgtaaattcaacagattcaatgtatcattttgca
cctactacctaccataatgaagtagctaatttttgcaataatatcccttaccagaatcaa
ataaatccacagtgtggtggtcaatattatgatagaataaattctggacatgaacaatcc
ataagtaaaaattatacaaactgggatatgcccgaaaatatatataatagcaattccgct
aataagtggcatgctaataattcatctgcaaattggacagtacatcaaagtacatctgct
tcatggtatggtacaaatgcgacaacatatgataaagacaaatcatgttcaacacaaatg
tataaattgttgcaaagaacagaggaatctaaatggaaatgcgataacagggaaactatg
aacaaacatacaattaatagacaaagatccagaagtccatatggcaaatcagaaaaaata
tacagatcacagtatgataatagaagggataggtatcgtcgaagcaacagagaaatatct
aattcaagggactccgcatatgatagcagacattttgaaaaatcttcatctaaaaaacgg
agctacacatctcgttcagaagaatcatatataagcaggaaaagatcgagctcgcgagaa
tctcatttaacgagagacacatcaccagctaacagcaaacgaacaaaaggtcctactgag
agggagatactgctagagaaatatagacgtaactattgtgcgacaagtaaggatatacaa
cgaaaactaaatgaattatcggcaatgggatctaaaggtattcttgagagtgagaaaaag
atttggacgcgctcatcaccagcagatctttactatatcagagatgaagataatcctaaa
ataatgaagggtactactaagctacaagaattgtgcatgacatttaaaaaattgttaata
gacagggcagctgcagctagagaattacagccaccatatgaaccacctccaaggaaaaca
agagcacgtctctgtcgtcataaatctgaagcttgtagtagttcctcatctgacagtgaa
aattctatggatgaggatgatagaacaatggaagaattaatggcaaagaaacagcatcca
caaagactgcatcctgaaatgtggtttaacgatcctggagagatgaatgatggtccatta
tgtagatgcagtgcaaaatcacgacgctcaggtatacgacacgggatttatgccggagaa
ggcgcaataaacaaatgtgatttaaatacgaataatgcagataaattgcatcactacaga
ataacgattagcccaccgactaattttctcaccaaaacaccgacgattattaaacacgac
gaacacgaatttatatttgaaggcttctccatgctctctcattttccattggtcaaatta
cctacatgtaaagttataagatttaatattgaatacacaattttatacatagaagagaaa
ttgccagaaaattttacaatacaagaacttgatttctttcagatgtatttgtttagagag
attttggagctcgtagattttgacttacacgcagcgcaagacaaatccggctgcggacaa
tttcattttatgccaagatttgtacgtgatttgactgacaatggccaagaaattctatca
atgaacgaagtcttgaattatttaataaagagcagtactctcttaataaatccagatgat
ctatctaaattggtggcaatgcctcaatacaaatggcaagattttgctgatgaagtaaag
ggtatggtcgtgacctatcctggaaaaaaaccgtgcagtgttcgtgttgatcaactggat
agaaatcaagatgatcaatctagtgggatatcgcatacttatcccgagatagttcatttt
ggtattcgtccaccacagcttagctacgcaggaaatgcagattatcagaaagcctggagg
gattacgtaaaatttcgacatctactcgcaaacatgtcgaaaccgtcctttgaagataag
aggaaattagaagcgaaggagaacaaactgcaggagttacgtacccagagcaaaatgaag
cgcgatgttacagtcgatgtcagttctgaaggattttacagaaccggcattatgtgcgat
atcgtgcaacatgcgatgttgataccggtgttagtctgtcatttaagatttcacaaatct
ttggataatctagaacgcacgttgggatatgagtttaaaaacagatacttgctccaattg
gctctcacgcatcccagctaccgtgagaatttcggcacaaatccggatcatgcgcgaaac
tccctgacaaattgcggcataagacagcctgaatatggtgaccgtagaattcattatatg
aacacgcgaaagcgtggtatcaatactctgataaatataatgtccagattcggcgcgaaa
acggaaacggaatcatcgatagctcataatgaacgactagaatttcttggtgatgcagtc
gtcgagttcctcacttctatccatctctttcacatgtttccggatttagaagagggtggt
ctggctacatacagagcggcaatcgtacaaaatcagcatcttgctgtattggcaaagaaa
ttgaatctggaagaatatatgctctatgctcatggtagcgatctttgccacgatttggaa
ctgaggcatgcaatggcaaattgcttcgaagcattgatgggttcgctatttcttgacgga
gggatagaggtggctgatcgggtctttggagagacacttttcaaaaatgaagatgatctt
gccaaagtatgggtcaattacccacgacaccctcttcaggaacaggaaccgacaggagat
cgacagtggattcctagctttgaattattacagaaattgacgaaatttgaagagtcaatt
ggaatagaattcactcatattcgtctgcttgctagagcgttcacagaccgtagtatagga
tataccaatttaacattaggatctaatcagcggttagaattcttaggagacactgtatta
cagctgatcgtttctgaatatttgtataaatttttccctgaacatcatgagggacattta
tcgttgttacgaagttcactcgtaaataataaaacacaagcagttgtctgcgatgatctc
ggtatgactcagtatgcgctttatgggaacccaaaagccgaattgaagacgaaggataga
gccgatttattagaagctttcctcggcgcgctttatgtcgacaaaggtttaaagtattgt
catgttttttgtaatgtttgcttcttcccacgtttacaagattttattatgaatcaagat
tggaatgatccaaagagcaaactacaacagtgttgcttaactttaagaactatggatggt
ggtgagccagatattcctgtatataaagtcattgagtgtaaaggaccgactaatacaaga
gtttatacagttgctgtatattttcaaggaaaacgactagctacagcttcaggacatagt
atccaagaagcagaaatgaactctgccaaagaagctttagaaaaatcacaagatttattt
ccgcaactagatcatcaaaaacgtgtaatagccaaaagtatgaaaatgcagcaatggcca
agtaaacagaaaccaaggggaaagtctgaaaaaaggcctcacgacagatctgatgattct
gactgtagccaaaactggagaagaagtcgaagcagagagcgcaatacttcaaaaaaaaaa
gaaacttaa
DBGET
integrated database retrieval system
