Pogonomyrmex barbatus (red harvester ant): 105429599
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Entry
105429599 CDS
T04903
Name
(RefSeq) zinc finger protein DPF3
KO
K13196
zinc finger protein ubi-d4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105429599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbar03041
]
105429599
03036 Chromosome and associated proteins [BR:
pbar03036
]
105429599
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105429599
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105429599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
Med3
Spt20_SEP
DUF4551
Motif
Other DBs
NCBI-GeneID:
105429599
NCBI-ProteinID:
XP_011640994
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MTTVAISPAMAHGNSGIIQVVNESNLSKIESFLNDTAYREAIENSSNYNSRLCRERRLRM
PFLDSQTGVAQNHSALFMSSRERLPGLLHGQIYTYPSKRWRKKRRQYLMHYLHPKRGPRG
DTEDGTEGIEAVTHVNDDSKDSVALKDEHSKDAWYYDEQDMLDMDAYEEPDPDSDYDYEE
SYSSKRKRRKTRGGGHHPARSHPPTTDSPGGKRTKGGGRGRKKTNYDSVDSDKPFVCDRG
TRRGRQNATSSSTSSPSPAAPTVAPAAGAASQPQQSQQQPQQQQQQQQQQQQQQQQQQLQ
SAVQTPLLIS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggtggcgatctccccagctatggctcacggtaacagcgggataatacaagtg
gtgaacgaaagtaatctgagcaaaatcgaaagcttcctcaacgacaccgcttacagagag
gccattgaaaattcatcgaattacaatagtcggctatgccgggagcgacgtcttcgcatg
cccttcctagattcacaaacaggtgttgcacaaaatcattccgcacttttcatgtcctcg
agagaaagattgccaggtttattgcacggccagatctatacttatccaagtaaacgatgg
cgaaagaaacgtcggcaatatttaatgcactatctacatccaaaacgaggaccaagaggt
gatacagaagatggaacggaaggtatagaagctgttacgcatgtaaatgatgatagcaaa
gattcagtcgcgcttaaagatgaacatagtaaagatgcctggtattatgacgagcaagat
atgttagacatggacgcctatgaagaacctgatcctgatagcgattatgattacgaagag
agctacagcagtaaacggaaacgcagaaaaactcgaggtggtgggcatcatcctgctcgt
agtcatccacctaccacagatagtccaggcggcaaacgtacaaagggtggaggtcgtgga
cgtaagaaaaccaactacgactcagttgattctgataaaccgttcgtttgtgaccgtggt
acgcgtcggggtcgtcagaacgctacttcctcgagtacctcgagtccctccccggcggcg
cctaccgtcgcacccgctgcgggagcggcgtcgcagccgcagcagtcgcagcagcagccg
cagcagcagcaacagcagcagcagcagcagcagcaacagcaacagcagcagcagctgcaa
tcggccgtgcagacgcccctgttaatatcgtga
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