KEGG   Pogonomyrmex barbatus (red harvester ant): 105429686
Entry
105429686         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03420  Nucleotide excision repair
pbar03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105429686
   03460 Fanconi anemia pathway
    105429686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbar03032]
    105429686
   03400 DNA repair and recombination proteins [BR:pbar03400]
    105429686
DNA replication proteins [BR:pbar03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    105429686
DNA repair and recombination proteins [BR:pbar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105429686
SSDB
Motif
Pfam: ERCC4 UPF0669 SAM_KSR1
Other DBs
NCBI-GeneID: 105429686
NCBI-ProteinID: XP_011641123
LinkDB
Position
Unknown
AA seq 1019 aa
MKATLIIAALITYALALDEELLHYVSDDVPGGSYKYYSLTYDGHIKIRLISLTGDADLYA
SQTISKPTYEPDHYCLQSTTCGEDIIFIPKSFKRPVSIGVYGHPSHEISKYTLLVSEILI
EGDIVPYDQNNXEIXKTSXKLSTNMLEYENQIFLEILQEDGLVITAKGLGIETVFANVIK
AYSDPGNLVIVLGTNDHDEHYFIDLLKSYGTSTLPRVINAECSSNDRETMYLEGGVFFIS
GRILVVDLLKNRVPLHLVTGILVYRAHNILNAYQEAFALRLYRQNNKTGFIKAFTNSSLA
FTVGYSQVERVMKTLFVKKLYLWPRFHTTVNNCLSKHEPEVIELHVQLTPKMQSIQTTLL
DIMNYTVKELKRLNKYLDLDELTVENAIAKKFHKQLHLQIDPIWHQLSTTTKQLFSDLKT
LRSLVISLTYEDSVSFYAMLNRLRTMEYAMKAGGWIMLDEFENLFKYAKSRVYTDKNDLK
LESNPKWEALSEVLTEIQEQKHQKKDYENIDKVLILVHDNNICRQLKNYLTMGAKQYLLY
EALKKLSHNKEQKTSGDSGKNAKDKQPTSESNTDEETQEIPDTYILTLSQKCTKEQEENQ
PSTSSKQDVKHQTLFEECSQIAEFDLSKEIYAASAPIVFIQAIKKGGDPMALQRTLTEHM
PNNVILYIADIGTVRQLEIYQNNNPSLNLKIYFLIYGGSVEEQEYLTSLRREKEAFHSLI
NTKTTMVIPEDQDGKSEACLAFAIQSNNTDQDNTRKGGMQSEAKVIPKVIVDMREFRSEL
PAILYTRGITIEPVTLVVGDYILTSEICVERKSISDLIGSLFSGRLYNQAVSMTRHYAKP
MLLIEFDQNKPFSFQGNYYVSRDFKHTDITAKLQLLTLHFPKLKIIWSPNPHATAQLFEE
LKQGRDQPDSNIAAKIGADEDTENKQIMMEKYNPHIQDFVAKLPGVNSKNLRFLLNKGKS
LDHLITMSQEELKEILGNQNDAELLYKALHEKYLPTGEGSSSGKGVSKVRGKKTFYQSK
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgaaggcaacgcttattattgcagcgctgataacctatgcattagcgttggatgaggaa
ttattgcattacgttagcgacgatgtacctggtggctcatataagtattacagtttgacg
tatgacggtcacattaagatacggttgatatcactaacaggagatgctgatttgtatgca
tcacaaactataagcaagccgacatatgagccagaccactattgtctgcaatctacaact
tgtggagaagatattatttttatacctaagagcttcaaacggcctgtgagcattggtgtt
tatggccatccatcccatgaaattagtaaatatactctattggtatccgaaatactgatc
gaaggtgatattgtaccttacgatcaaaacaattaagaaatttaaaaaactagttgaaaa
ctgtcaacaaacatgttagaatatgaaaatcaaatcttccttgaaattcttcaggaagat
ggattagttattacagccaagggtcttggtatagaaactgtttttgcaaatgtgataaaa
gcttactcggacccaggcaatctagttatagtcctgggaaccaatgatcatgatgagcat
tactttattgatttactaaagagttatggaacaagtacattaccgcgtgtaatcaatgcc
gaatgttcttctaatgatagggaaacaatgtatttggagggtggagtgttttttatatcc
ggtcgtattttggtggtagatctgttaaaaaacagagttccattacatctagtcactggt
attcttgtatatagagctcataatattttgaatgcttatcaagaggcatttgcgttgcgt
ctatacagacaaaataacaaaactggatttatcaaagcattcacaaattcatcactggcc
ttcacagttggatattcacaagtagaacgagtcatgaaaactctgtttgtgaaaaaatta
tatttatggccgcgctttcacacaacggttaataattgtttatctaaacatgaacccgaa
gttatagaactacatgtgcagctcacaccaaaaatgcagagcattcaaactactttgctt
gatattatgaattatactgtgaaagaattaaagagactcaataaatatttagatttagat
gaattgactgtggagaatgcaatagcaaagaagtttcacaagcaattacatttacaaata
gatccaatctggcatcagcttagtacaacaaccaaacaattgttttctgatttaaaaaca
ttacgttctcttgtcatatctttaacatatgaagattccgtttcattttatgccatgtta
aatcgtttacggactatggaatatgctatgaaagccggtggttggataatgttagatgaa
ttcgagaatttgtttaaatatgccaaaagcagagtttatacagataagaatgacttgaaa
ctggaatcaaacccaaaatgggaagctttatctgaagttttaactgagattcaagaacag
aaacatcaaaaaaaagattatgaaaatattgataaagttctcattttagtacatgacaac
aatatatgtcgtcaattaaagaattatttaactatgggagcaaaacaatatttactttat
gaagctttaaaaaaattatcacataataaggaacagaagacaagtggagatagtggaaag
aatgcaaaagataaacaaccaacatctgaaagtaatacagatgaagaaacgcaagagatt
ccagatacttacatactcactttatcgcaaaaatgtacgaaagagcaagaagaaaatcaa
cccagcacttcatccaaacaagatgtaaaacatcagacattatttgaagaatgttcgcaa
attgcagaatttgatttaagtaaagagatttatgcagcatccgcacctatcgttttcata
caagccataaagaaagggggagatccgatggctttacaacgaacattaactgaacatatg
ccaaacaatgttattttgtacattgccgatattggtaccgtgagacaactagagatatat
cagaataataatccgtcattaaatctgaaaatatattttttgatttatggtgggtcggtg
gaagaacaagaatatctgacttctttacgacgagaaaaagaagcatttcattctttgata
aatacaaaaactactatggtgataccagaagatcaagatggaaaatcagaagcttgtctg
gcttttgcaattcaatcaaataatacagatcaggataatacgcgtaaaggtggaatgcaa
tctgaagccaaagtaattccaaaagttattgttgatatgagggaattcagaagtgaatta
ccagctattttatatacacgtggcataacaatcgaaccagtgacattagtagtgggtgac
tatattctaacatcagaaatatgcgttgagaggaaaagcatatctgacttgattggttct
ttattttctggaagattgtataatcaagcagtttctatgacaagacattatgctaaacct
atgctccttatagaatttgatcagaataaaccattcagttttcaaggcaattattatgtt
agtagagattttaaacatactgatatcacagcaaaattacaattgctaacacttcatttt
cctaaattaaaaattatatggtcccctaatccacatgctacagcacagttatttgaggaa
ctaaagcaaggacgagatcagcctgattcaaatatagctgctaaaattggagcagatgaa
gatacagaaaataaacaaataatgatggaaaaatacaatcctcacatccaagattttgta
gctaagttgccaggtgtaaattcgaaaaatttgcgttttctattaaacaaaggaaaatca
ttagatcatcttatcacaatgtcacaagaagaactaaaagaaatacttggaaatcaaaat
gatgcagaattgttatataaagctctacacgaaaaatatttaccaacaggtgaaggctcg
tcatcaggcaaaggtgtttctaaggtacgtggtaaaaaaactttttaccagagcaaataa

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