Pogonomyrmex barbatus (red harvester ant): 105429982
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Entry
105429982 CDS
T04903
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105429982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105429982
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105429982
mRNA degradation factors
5'-3' decay
Lsm complex
105429982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105429982
NCBI-ProteinID:
XP_011641574
UniProt:
A0A6I9WPR0
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MNETNELPPGTASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEY
GDIPRGIFIVRGENVVLLGEIDIEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRVNKA
LKERGFAYIPDLSHDDMY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaccaacgaattgccaccagggacagcatcgttactcgaagaactcgaaaaa
aaacttatggttttattgagagatggtagaacactaattggttatcttaaaagtgtcgat
caatttgctaatatagtgcttcaaagtactattgaaagaattcatgttggtcaagaatat
ggtgatattcccagaggtattttcatagtaagaggagagaatgttgtacttttaggagaa
atagatatagaaaaggaaaaggtcttgcccttgaaaaaggtgacagtggatgaaatttta
gatgctcaaagacgtgaacaagaatcaaagcaggagcagaaaaaacgagtaaacaaagct
ttgaaagagagaggttttgcatatataccagatttaagtcatgatgatatgtactga
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