Pogonomyrmex barbatus (red harvester ant): 105430120
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Entry
105430120 CDS
T04903
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105430120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105430120
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105430120
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105430120
RNA polymerase I system
105430120
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105430120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
KOW7_SPT5
KOW2_Spt5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
CTD
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
105430120
NCBI-ProteinID:
XP_011641792
UniProt:
A0A6I9XAN2
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MSDSEGGSDAGSIGGRSRSVSRSRSPSRSSASRSPSRSRSRSRSPSGSEDGDTKADEAEE
VRSGDEEAVEPEEEPEGEDLNSSEYDEEEDEEDDDRPRKKKKKDRFGGFIIDEAEVDDEV
EDDEEWEEGAQEIGIVGNEVDEVGPTARDIEGRRRGTNLWDSQKEDEIEEYLRKKYADES
LAARHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATVLLLMRKFITYQFSSE
PLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVK
EQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESE
ALKRKKKRRPPAKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTTSAIIAEG
VKPTLSELERFEEAPEGVEIDLSGTPGTGTSGKEDQAVAHSFSNGDNVEVCEGELINLQG
KIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGLIVRVEQN
RVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLERENF
HVLSMHGKVVEARPQGLTKRRENRNAVALDSQQNTIQKKDIVKVVDGPHAGRGGEIKHLY
RSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTTSINSMSPVTGFMSPRIASPMHPSGGG
FGRGGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTARVELHST
CQTISVDRSHIANVGVPTKDGGFSSYNRTPAYGAGGQTPMYARDGSKTPMHGSQTPMYEN
GSRTPHYGSMTPSHDGSRTPGQSGAWDPSVTNTPARTNDFDGYSMEEGGSPGYGPGYPPT
GGPFTPQTPGTMYGSEQSFSSYQPSPSPGGSATASPSPAGYVATPSPSGTGYTTSPHGAF
ATPSPMGYSPMTPGVPGSPYNPQTPGSGLDAVGSGIIGSSEWHTTDIEVRIRDSHDDPAL
AGQQAVIRGISGGMCTIYLPTEDRVVNLVCEQLEPVVPSRGDRVKVILGEDREAVGTLLS
IDNQEGVVKLNTDEIKFLQLRFLCKMKAPNT
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaaggtggcagcgatgcgggaagcatcggaggaagatctcgtagcgtc
tctcgcagcaggagtccctcgcggagctcggcatccagaagtccgtccagatctcgatcg
cgttcccgatcgccatctggctctgaagatggagacactaaggcagatgaggcagaggaa
gtcagatcaggagatgaagaagccgtggaaccagaagaagaacctgaaggggaagacttg
aatagcagtgaatatgatgaggaagaagatgaagaggatgatgacagaccgagaaagaag
aagaagaaagatagatttggtggctttattatagacgaagctgaagtagatgatgaagtt
gaggatgacgaagaatgggaagaaggtgctcaagaaattggtattgtaggaaatgaggtt
gacgaagtaggaccaacagcgcgtgacattgaaggacgaaggagaggtacaaatctttgg
gattcacagaaagaagatgaaattgaggaatatctccggaaaaaatatgccgacgaatcg
ctcgctgctcgtcattttggcgatggcggtgaagagatgagtgacgaaattactcagcaa
accttgttgcctggcgtgaaagatcccaatttatggatggtaaaatgtcgtataggagaa
gaaaaagctactgtactcttattgatgcgaaaatttatcacgtatcaattttcaagtgaa
cctcttcagataaaatctgttgtggcaccagaaggtgttaaaggatatatttacatagaa
gcttacaagcaaccgcatgtaaaagctgctatcgaaaacgttgggaatcttaggatgggt
atttggaaacaacaaatggtaccgattaaagaaatgacggatgtcctgcgagtagttaaa
gagcagaccggcttaaaagctaaacaatgggtccgtttaaaacgaggcatttataaagat
gatatagctcaagttgattatgtcgacttagcacagaatcaagttcacttgaagttactt
ccaagaattgattacactagaccacgcggagcattgagaacagcacaaagcgaatctgaa
gcattgaaacgcaagaagaaaagacgaccaccagcaaaaccatttgatcctgaagcaatt
cgtgctattggcggagaagttaccagcgatggagatttccttattttcgaaggaaataga
tatagccgtaaaggttttctttataaaaatttcaccacaagtgctattatcgcggaaggt
gttaaacctacactctccgaattagagagatttgaggaagcgccagaaggtgtagaaata
gatttaagtggtacaccaggaactggaacttctgggaaagaagatcaagctgtagcgcat
tcctttagtaacggagataacgtagaagtttgtgagggtgaattgataaatctacaagga
aagattgtttctatagatggaaacatgatcatggttatgccaaaacatgaagaacttaaa
gaagctttggaatttcaagcttcagagttgagaaaatatttcacacaaggagatcacgtc
aaagttgtagccggaagatatgaaggcgatacaggtttaattgttagagtagagcaaaat
agagtagttttattctcagatttgtcaatgcacgaacttgaggttctcccgagggatcta
caattgtgttctgacatggctaccggcgtggatagcttaggacaattccaatggggtgat
ttggtgcagcttgatgcgcaaacagtcggtgttatcgtccgattggaacgtgagaatttt
cacgtactctctatgcacggaaaagtagtggaggcgagaccgcaaggtcttacgaagcgc
cgagaaaatagaaacgcggtcgctttagactcgcaacagaacaccatacagaagaaagac
atcgttaaagtggttgatgggccacacgcaggtcgaggcggtgaaattaaacatctgtat
agaagttttgcttttctacactcgagaatgttcgtcgacaacggtggaatattcgtatgc
aaaactaggcatttacagctgtccggtggaaataaaacaacgtctatcaattccatgtca
ccagtgacaggttttatgtcacctagaattgcctctccaatgcatcccagcggaggtggt
tttggacgaggcggtggtggcggtggaagaggcagaggtcgtggcggtggcggtggtgcg
agacgtgatagggaattaattggaaccaccattaagataacaggtggaccatacaaggga
aatgtaggtattgtaaaagatgcgacagagacaacagcccgtgtagaactgcattccacg
tgtcagacgatctccgtcgatcgatctcatatagcaaacgtcggcgtcccgacaaaagac
ggtggcttcagcagttacaacagaactccagcttatggagccggtggacagacgccgatg
tatgcgagagacggatcaaaaacaccaatgcacggttctcaaacacctatgtacgaaaat
ggctctcgcactcctcattacggttcaatgacgccgtctcacgatggttcgcgtacacca
gggcaatctggagcctgggatccatcagttactaatactcctgcaagaacaaacgatttt
gatggctatagcatggaggaaggtggctcgcccggttatggacctggatatcctcctact
ggaggtccgtttactccacaaacaccgggtactatgtatggttcagaacaaagtttcagt
tcgtatcaaccgagtcctagtcctgggggcagtgctactgcaagtccgagtcctgcaggc
tacgttgctactccatctcctagtggtactggttatactactagtcctcacggagcattt
gcgactccttctccgatgggttacagtcctatgacacctggggtaccaggtagtccatat
aatccgcaaacaccaggttcaggattggatgcagttggttctggtatcataggtagctca
gaatggcatacaacagatattgaagtacgtattcgcgactctcacgacgatcctgcgctc
gctggacaacaagctgttatccgaggaatttctggcggcatgtgcaccatttatctacct
accgaagatcgagttgtaaatctcgtatgtgaacaattggagcctgtggtaccgtcacgt
ggcgatcgagtcaaagtgattctaggtgaagatcgcgaagccgtcggcactttactttcg
atcgataatcaagagggagtggtaaaactcaatacggacgaaattaaattcctgcaatta
cgatttttgtgtaaaatgaaagcaccgaatacgtaa
DBGET
integrated database retrieval system
